FFCP PHASE1:Hg19::chr6:154568815..154568826,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:154568815..154568826,- to FFCP PHASE1:Hg19::chr6:154568815..154568826,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26034 | |EntrezGene=26034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21204 | |HGNC=21204 | ||
|TSSclassifier=strong | |||
|UniProt=G3V132 | |UniProt=G3V132 | ||
|association_with_transcript=0bp_to_ENST00000519344_5end | |||
|cluster_id=chr6:154568815..154568826,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_6_at_IPCEF1_5end | |||
|id=chr6:154568815..154568826,- | |||
|ontology_enrichment_celltype=CL:0000791!1.36e-22!18;CL:0000789!1.36e-22!18;CL:0002420!1.36e-22!18;CL:0002419!1.36e-22!18;CL:0000790!1.36e-22!18;CL:0000084!9.34e-22!25;CL:0000827!9.34e-22!25;CL:0000838!1.81e-19!52;CL:0000542!7.11e-19!53;CL:0000051!7.11e-19!53;CL:0000738!7.49e-16!140;CL:0002087!4.71e-15!119;CL:0000625!2.25e-14!11;CL:0000037!5.22e-13!172;CL:0000566!5.22e-13!172;CL:0002031!4.45e-12!124;CL:0002032!1.43e-11!165;CL:0000837!1.43e-11!165;CL:0000988!2.86e-11!182;CL:0000624!7.43e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.77e-40;18!CL:0000789;4.77e-40;18!CL:0002419;4.77e-40;18!CL:0000084;3.72e-34;25!CL:0000625;2.53e-23;11!CL:0000624;2.03e-16;6!CL:0000542;7.68e-13;53!CL:0000898;2.50e-09;3!CL:0000623;2.16e-08;3!CL:0000815;6.03e-07;2!CL:0000792;6.03e-07;2!CL:0002677;6.03e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.98e-40,18;CL:0000789,1.98e-40,18;CL:0002420,1.98e-40,18;CL:0002419,1.98e-40,18;CL:0000790,1.98e-40,18;CL:0000084,1.98e-34,25;CL:0000827,1.98e-34,25;CL:0000838,1.73e-27,52;CL:0000542,7.91e-27,53;CL:0000051,7.91e-27,53;CL:0000625,1.22e-23,11;CL:0000624,1.89e-16,6;CL:0002087,3.00e-11,115;CL:0000738,4.79e-10,136;CL:0000898,2.19e-09,3;CL:0002031,1.04e-08,120;CL:0000623,3.14e-08,3;CL:0000825,3.14e-08,3;CL:0000037,2.27e-07,168;CL:0000815,6.13e-07,2;CL:0000792,6.13e-07,2;CL:0002677,6.13e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;4.77e-40;18!CL:0000051;7.68e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.69e-27!115;UBERON:0001049!1.54e-14!57;UBERON:0005068!1.54e-14!57;UBERON:0006241!1.54e-14!57;UBERON:0007135!1.54e-14!57;UBERON:0002616!8.79e-12!59;UBERON:0002780!1.36e-11!41;UBERON:0001890!1.36e-11!41;UBERON:0006240!1.36e-11!41;UBERON:0001869!1.81e-11!32;UBERON:0001893!2.21e-11!34;UBERON:0003080!3.84e-11!42;UBERON:0002020!3.99e-11!34;UBERON:0003528!3.99e-11!34;UBERON:0001017!6.43e-11!82;UBERON:0000178!8.94e-11!15;UBERON:0000179!8.94e-11!15;UBERON:0000463!8.94e-11!15;UBERON:0002791!1.35e-10!33;UBERON:0005743!1.66e-10!86;UBERON:0000955!5.11e-10!69;UBERON:0006238!5.11e-10!69;UBERON:0002619!2.20e-09!22;UBERON:0001950!2.64e-09!20;UBERON:0003075!3.10e-09!86;UBERON:0007284!3.10e-09!86;UBERON:0004177!4.22e-09!7;UBERON:0002346!5.86e-09!90;UBERON:0000073!1.68e-08!94;UBERON:0001016!1.68e-08!94;UBERON:0000956!8.80e-08!25;UBERON:0000203!8.80e-08!25;UBERON:0003056!3.36e-07!61;UBERON:0002193!7.30e-07!112;UBERON:0002390!8.16e-07!102;UBERON:0003061!8.16e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.60e-15;15!UBERON:0000179;1.60e-15;15!UBERON:0000463;1.60e-15;15!UBERON:0002390;9.98e-10;32!UBERON:0001950;1.38e-07;20!UBERON:0002619;8.59e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.43e-15,15;UBERON:0000179,1.43e-15,15;UBERON:0000463,1.43e-15,15;UBERON:0002370,3.07e-11,4;UBERON:0005058,3.07e-11,4;UBERON:0009113,3.07e-11,4;UBERON:0003295,3.07e-11,4;UBERON:0005562,3.07e-11,4;UBERON:0004177,9.49e-10,7;UBERON:0005057,9.49e-10,7;UBERON:0007023,6.97e-08,114;UBERON:0003351,1.80e-07,6;UBERON:0001950,1.91e-07,20 | |||
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|short_description=p6@IPCEF1 | |||
}} | }} |
Latest revision as of 08:10, 16 September 2015
Short description: | p6@IPCEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IPCEF1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000519344_5end |
EntrezGene: | IPCEF1 |
HGNC: | 21204 |
UniProt: | G3V132 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.98e-40 | 18 |
alpha-beta T cell | 1.98e-40 | 18 |
immature T cell | 1.98e-40 | 18 |
mature T cell | 1.98e-40 | 18 |
immature alpha-beta T cell | 1.98e-40 | 18 |
T cell | 1.98e-34 | 25 |
pro-T cell | 1.98e-34 | 25 |
lymphoid lineage restricted progenitor cell | 1.73e-27 | 52 |
lymphocyte | 7.91e-27 | 53 |
common lymphoid progenitor | 7.91e-27 | 53 |
CD8-positive, alpha-beta T cell | 1.22e-23 | 11 |
CD4-positive, alpha-beta T cell | 1.89e-16 | 6 |
nongranular leukocyte | 3.00e-11 | 115 |
leukocyte | 4.79e-10 | 136 |
naive T cell | 2.19e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 1.04e-08 | 120 |
natural killer cell | 3.14e-08 | 3 |
pro-NK cell | 3.14e-08 | 3 |
hematopoietic stem cell | 2.27e-07 | 168 |
regulatory T cell | 6.13e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.13e-07 | 2 |
naive regulatory T cell | 6.13e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.43e-15 | 15 |
haemolymphatic fluid | 1.43e-15 | 15 |
organism substance | 1.43e-15 | 15 |
thymus | 3.07e-11 | 4 |
hemolymphoid system gland | 3.07e-11 | 4 |
thymic region | 3.07e-11 | 4 |
pharyngeal gland | 3.07e-11 | 4 |
thymus primordium | 3.07e-11 | 4 |
hemopoietic organ | 9.49e-10 | 7 |
immune organ | 9.49e-10 | 7 |
adult organism | 6.97e-08 | 114 |
pharyngeal epithelium | 1.80e-07 | 6 |
neocortex | 1.91e-07 | 20 |