FFCP PHASE1:Hg19::chr5:150632666..150632677,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:150632666..150632677,+ to FFCP PHASE1:Hg19::chr5:150632666..150632677,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2760 | |EntrezGene=2760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4367 | |HGNC=4367 | ||
|TSSclassifier=strong | |||
|UniProt=P17900 | |UniProt=P17900 | ||
|association_with_transcript=53bp_to_NM_000405,NM_001167607,uc003ltr.3,uc011dcr.1,uc011dcs.1_5end | |||
|cluster_id=chr5:150632666..150632677,+ | |||
|coexpression_cluster_id=C2815 | |||
|description=CAGE_peak_6_at_GM2A_5end | |||
|id=chr5:150632666..150632677,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!9.83e-13!86;UBERON:0007284!9.83e-13!86;UBERON:0001049!7.17e-12!57;UBERON:0005068!7.17e-12!57;UBERON:0006241!7.17e-12!57;UBERON:0007135!7.17e-12!57;UBERON:0007023!9.82e-12!115;UBERON:0005743!7.03e-11!86;UBERON:0002346!1.17e-10!90;UBERON:0002616!1.92e-10!59;UBERON:0001017!2.75e-10!82;UBERON:0002780!6.61e-10!41;UBERON:0001890!6.61e-10!41;UBERON:0006240!6.61e-10!41;UBERON:0003056!2.70e-09!61;UBERON:0000955!3.74e-09!69;UBERON:0006238!3.74e-09!69;UBERON:0003080!4.22e-09!42;UBERON:0000033!4.30e-09!123;UBERON:0000073!6.64e-09!94;UBERON:0001016!6.64e-09!94;UBERON:0001893!7.71e-09!34;UBERON:0002020!1.52e-08!34;UBERON:0003528!1.52e-08!34;UBERON:0004121!1.57e-08!169;UBERON:0002791!2.24e-08!33;UBERON:0001869!4.07e-08!32;UBERON:0000153!5.65e-08!129;UBERON:0007811!5.65e-08!129;UBERON:0000924!2.10e-07!173;UBERON:0006601!2.10e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.78e-08;34!UBERON:0002780;6.09e-08;41!UBERON:0001890;6.09e-08;41!UBERON:0003528;1.00e-07;34!UBERON:0002020;1.00e-07;34!UBERON:0000073;1.02e-07;53!UBERON:0002616;1.02e-07;53!UBERON:0001869;1.07e-07;32!UBERON:0002791;2.47e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,7.16e-15,82;UBERON:0007284,7.16e-15,82;UBERON:0001049,3.82e-14,56;UBERON:0005068,3.82e-14,56;UBERON:0006241,3.82e-14,56;UBERON:0007135,3.82e-14,56;UBERON:0010371,2.37e-13,104;UBERON:0002346,5.65e-13,86;UBERON:0000073,1.40e-12,53;UBERON:0002616,1.40e-12,53;UBERON:0007023,1.58e-12,114;UBERON:0001017,4.40e-12,81;UBERON:0003056,1.02e-10,61;UBERON:0000955,1.53e-10,68;UBERON:0006238,1.53e-10,68;UBERON:0002780,1.56e-10,41;UBERON:0001890,1.56e-10,41;UBERON:0003080,1.56e-10,41;UBERON:0006240,1.56e-10,41;UBERON:0010314,6.26e-10,132;UBERON:0001893,1.70e-09,34;UBERON:0001016,1.79e-09,89;UBERON:0003528,3.62e-09,34;UBERON:0002020,3.62e-09,34;UBERON:0001869,1.11e-08,32;UBERON:0004121,1.14e-08,171;UBERON:0000924,1.14e-08,171;UBERON:0006601,1.14e-08,171;UBERON:0002791,2.29e-08,32 | |||
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| ||
|short_description=p6@GM2A | |||
}} | }} |
Latest revision as of 08:34, 16 September 2015
Short description: | p6@GM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GM2A_5end |
Coexpression cluster: | C2815_Monocytederived_CD14_Mast_corpus_Macrophage_Dendritic_optic |
Association with transcript: | 53bp_to_NM_000405, NM_001167607, uc003ltr.3, uc011dcr.1, uc011dcs.1_5end |
EntrezGene: | GM2A |
HGNC: | 4367 |
UniProt: | P17900 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural plate | 7.16e-15 | 82 |
presumptive neural plate | 7.16e-15 | 82 |
neural tube | 3.82e-14 | 56 |
neural rod | 3.82e-14 | 56 |
future spinal cord | 3.82e-14 | 56 |
neural keel | 3.82e-14 | 56 |
ecto-epithelium | 2.37e-13 | 104 |
neurectoderm | 5.65e-13 | 86 |
regional part of nervous system | 1.40e-12 | 53 |
regional part of brain | 1.40e-12 | 53 |
adult organism | 1.58e-12 | 114 |
central nervous system | 4.40e-12 | 81 |
pre-chordal neural plate | 1.02e-10 | 61 |
brain | 1.53e-10 | 68 |
future brain | 1.53e-10 | 68 |
regional part of forebrain | 1.56e-10 | 41 |
forebrain | 1.56e-10 | 41 |
anterior neural tube | 1.56e-10 | 41 |
future forebrain | 1.56e-10 | 41 |
structure with developmental contribution from neural crest | 6.26e-10 | 132 |
telencephalon | 1.70e-09 | 34 |
nervous system | 1.79e-09 | 89 |
brain grey matter | 3.62e-09 | 34 |
gray matter | 3.62e-09 | 34 |
cerebral hemisphere | 1.11e-08 | 32 |
ectoderm-derived structure | 1.14e-08 | 171 |
ectoderm | 1.14e-08 | 171 |
presumptive ectoderm | 1.14e-08 | 171 |
regional part of telencephalon | 2.29e-08 | 32 |