FFCP PHASE1:Hg19::chr1:117297044..117297099,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=914 | |EntrezGene=914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1639 | |HGNC=1639 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JVN7,P06729,Q53F96 | |UniProt=Q5JVN7,P06729,Q53F96 | ||
|association_with_transcript=0bp_to_ENST00000369477,NM_001767,uc001egu.3,uc010owz.1,uc010oxa.1_5end | |association_with_transcript=0bp_to_ENST00000369477,NM_001767,uc001egu.3,uc010owz.1,uc010oxa.1_5end | ||
|cluster_id=chr1:117297044..117297099,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_1_at_CD2_5end | |description=CAGE_peak_1_at_CD2_5end | ||
|id=chr1:117297044..117297099,+ | |id=chr1:117297044..117297099,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.36e-43!140;CL:0000037!6.94e-36!172;CL:0000566!6.94e-36!172;CL:0002087!5.91e-33!119;CL:0002031!3.15e-32!124;CL:0000988!1.43e-31!182;CL:0002032!1.60e-31!165;CL:0000837!1.60e-31!165;CL:0000766!9.55e-22!76;CL:0000084!8.59e-21!25;CL:0000827!8.59e-21!25;CL:0000791!1.16e-17!18;CL:0000789!1.16e-17!18;CL:0002420!1.16e-17!18;CL:0002419!1.16e-17!18;CL:0000790!1.16e-17!18;CL:0000839!8.94e-17!70;CL:0000763!1.79e-16!112;CL:0000049!1.79e-16!112;CL:0000557!1.81e-16!71;CL:0002057!4.56e-16!42;CL:0002194!6.33e-16!63;CL:0000576!6.33e-16!63;CL:0000040!6.33e-16!63;CL:0000559!6.33e-16!63;CL:0002009!8.72e-16!65;CL:0000838!2.56e-15!52;CL:0000542!9.37e-15!53;CL:0000051!9.37e-15!53;CL:0000860!4.02e-14!45;CL:0000625!1.23e-11!11;CL:0000624!7.91e-07!6 | |ontology_enrichment_celltype=CL:0000738!4.36e-43!140;CL:0000037!6.94e-36!172;CL:0000566!6.94e-36!172;CL:0002087!5.91e-33!119;CL:0002031!3.15e-32!124;CL:0000988!1.43e-31!182;CL:0002032!1.60e-31!165;CL:0000837!1.60e-31!165;CL:0000766!9.55e-22!76;CL:0000084!8.59e-21!25;CL:0000827!8.59e-21!25;CL:0000791!1.16e-17!18;CL:0000789!1.16e-17!18;CL:0002420!1.16e-17!18;CL:0002419!1.16e-17!18;CL:0000790!1.16e-17!18;CL:0000839!8.94e-17!70;CL:0000763!1.79e-16!112;CL:0000049!1.79e-16!112;CL:0000557!1.81e-16!71;CL:0002057!4.56e-16!42;CL:0002194!6.33e-16!63;CL:0000576!6.33e-16!63;CL:0000040!6.33e-16!63;CL:0000559!6.33e-16!63;CL:0002009!8.72e-16!65;CL:0000838!2.56e-15!52;CL:0000542!9.37e-15!53;CL:0000051!9.37e-15!53;CL:0000860!4.02e-14!45;CL:0000625!1.23e-11!11;CL:0000624!7.91e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.20e-26;25!CL:0000791;3.90e-22;18!CL:0000789;3.90e-22;18!CL:0002419;3.90e-22;18!CL:0000860;2.90e-17;33!CL:0002057;2.90e-17;33!CL:0000625;1.97e-14;11!CL:0000473;9.39e-13;39!CL:0000234;9.39e-13;39!CL:0000576;7.67e-12;48!CL:0002087;4.03e-11;104!CL:0000738;3.47e-09;136!CL:0000766;2.61e-08;69!CL:0000624;2.70e-08;6!CL:0000094;4.50e-08;8!CL:0000542;4.78e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.87e-40,136;CL:0002087,1.81e-33,115;CL:0000037,5.24e-30,168;CL:0002031,3.54e-28,120;CL:0000988,5.36e-27,177;CL:0000084,2.36e-26,25;CL:0000827,2.36e-26,25;CL:0002032,2.53e-25,161;CL:0000837,2.53e-25,161;CL:0000791,3.90e-22,18;CL:0000789,3.90e-22,18;CL:0002420,3.90e-22,18;CL:0002419,3.90e-22,18;CL:0000790,3.90e-22,18;CL:0000766,2.54e-20,72;CL:0002194,3.04e-17,59;CL:0000576,3.04e-17,59;CL:0000040,3.04e-17,59;CL:0000559,3.04e-17,59;CL:0002009,3.33e-17,61;CL:0000860,8.75e-17,42;CL:0002057,8.75e-17,42;CL:0000473,1.76e-15,48;CL:0000234,1.76e-15,48;CL:0000557,1.49e-14,67;CL:0000625,1.99e-14,11;CL:0000839,3.96e-14,66;CL:0000838,4.28e-14,52;CL:0000542,1.25e-13,53;CL:0000051,1.25e-13,53;CL:0000763,3.08e-12,108;CL:0000049,3.08e-12,108;CL:0000624,2.69e-08,6;CL:0000094,3.96e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000790;3.90e-22;18!CL:0002057;5.11e-13;42!CL:0000051;4.78e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.55e-36!115;UBERON:0002390!1.77e-23!102;UBERON:0003061!1.77e-23!102;UBERON:0002193!4.23e-21!112;UBERON:0002371!2.02e-13!80;UBERON:0002405!1.60e-12!115;UBERON:0001474!2.54e-11!86;UBERON:0004765!1.26e-08!101;UBERON:0001434!1.26e-08!101;UBERON:0000178!6.66e-08!15;UBERON:0000179!6.66e-08!15;UBERON:0000463!6.66e-08!15 | |ontology_enrichment_uberon=UBERON:0007023!3.55e-36!115;UBERON:0002390!1.77e-23!102;UBERON:0003061!1.77e-23!102;UBERON:0002193!4.23e-21!112;UBERON:0002371!2.02e-13!80;UBERON:0002405!1.60e-12!115;UBERON:0001474!2.54e-11!86;UBERON:0004765!1.26e-08!101;UBERON:0001434!1.26e-08!101;UBERON:0000178!6.66e-08!15;UBERON:0000179!6.66e-08!15;UBERON:0000463!6.66e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.77e-10;15!UBERON:0000179;3.77e-10;15!UBERON:0000463;3.77e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.18e-23,98;UBERON:0003061,1.18e-23,98;UBERON:0002193,7.45e-22,108;UBERON:0007023,3.81e-20,114;UBERON:0002405,1.56e-14,93;UBERON:0002371,3.70e-12,76;UBERON:0001474,2.03e-10,82;UBERON:0000178,3.80e-10,15;UBERON:0000179,3.80e-10,15;UBERON:0000463,3.80e-10,15;UBERON:0004765,1.64e-08,90;UBERON:0003081,6.15e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0,36.976242023797,108.239890263414,18.268302551297,0,0,0,0,0,2.64240395401362,36.5636969631039,22.0598892217156,23.0031522958803,13.4349284543955,49.5557309009039,16.9999874638563,3.92575244704825,2.26725566213286,1.69808842831471,3.95129362739664,4.11167888021826,1.85823822537062,5.46615545412086,5.37937483711111,3.07426898855161,4.82643953031266,3.87290810150296,2.70852973188684,4.70605848856512,2.72906150057846,2.69668181334102,6.73384563215986,6.41858054152187,5.11469700639233,2.63881040149373,5.38551875578406,2.13112375266347,5.5139755339431,5.10646702222026,1.86846674698672,2.76373531782418,6.25779502104242,3.04064382587163,3.63239701580021,8.83866326370155,6.0127853613768,0,0.212604299965044,0.628975936525128,1.12328631146495,0.600707571366025,0.48217676009124,0,0,0,0,1.63841583378639,0,3.41384178053206,0.400395987036012,0,0,0.954053754535364,0,0.587237189370939,0.764546456250458,1.32171328579026,34.7515309048552,2.89722493252585,169.760531608238,112.401078146261,133.024169852682,309.127829977364,222.278985844109,241.931828730449,103.258166056193,549.476373357676,350.286423987581,420.471331919713,401.872933827283,402.334835258346,428.935728252478,280.531065253871,260.874416789841,289.223479563582,239.779372633052,245.870021014446,153.667219993316,351.598890390548,398.549313345998,436.40685576294,560.185598131179,460.645589112644,400.416324121697,455.266529290771,288.200777914857,346.843716228474,468.490224571297,508.12398288646,442.587990340444,161.285394579786,112.05744203329,102.101204737373,0,0,0,0,0,0,0,0,0,0,0.702678285545008,6.81091192588106,0,0,2.59637914923747,3.30846500868608,2.12732736830184,5.24679373471752,12.0118931263827,5.57186251994347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,23.2668158488995,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.77236972004421,50.3267933332702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0.985326475791887,0.176096868026452,0.207328115540772,0.864719720501769,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21667878966063,0,0,0,0,0,0,103.790843338006,133.389824656705,105.873139256023,92.5353291576986,0,0,0,0,0,4.49404214368309,2.99161459204025,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,114.54948647208,61.0471188316686,72.6814668641456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,5.97637867556789,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.426133137080504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78841148289775,0,0,0,0,0,0.633322905892992,0,0,0,0,1.34060455107157,0,6.02520324971387,0,0,0,0,87.7884363971653,78.7576323356647,90.0042555735177,141.271442846469,121.351870560427,71.3320642311989,92.3453757677176,106.278773623432,0,0,0,0,0,30.3775671097728,3.18852545457645,0.997896857164083,4.97913962344153,0,0.324621940274555,0.280797178113459,17.1176009274894,0.156679895773023,0,0.338583555603207,0,0,0,0,0.307240764308458,0,0.166849141711909,0.586164286206121,0,0,0,0,0,0,3.36968812325356,0,292.315996959826,0,0,0.296964680832639,0,0,0.703347082052564,0,0,0,4.38345574152353,39.232316005423,0,0,0,0,0,0,0,8.68061969605016,83.8190823214289,0,0,0.185536196323703,0,0,0,2.89999830173917,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.442317039724898,0.295547618953547,1.97446857438575,0,0,7.15637404085313,0,0,0,0,3.50901275705111,0.549585560411174,1.5991043280559,169.640875004923,0,0.332423363800313,0,0,0,0,0,0,0,0,0,3.98104772431402,14.1532103205343,4.27721101453538,0,0,0,0.876214728748802,1.60515529459758,0.468528891450678,0,0,0,0.789168805698781,13.308978765353,0,6.57140428136275,0,0,0,0,0,0,0,0,0,0,0,4.89234671077684,0,0,0,0,6.013319022282,0,0.677942222341597,0,0,0.316553979779393,0,0,11.9533677054037,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,30.4949330964005,2.23425921017803,2.29160424011684,3.58936512288407,0,0.858452096273142,1.11585728720936,0.806201669840715,0,0,0,0,0,0,44.1148060062737,0.795229689809303,0.681017030557878,0,0,0,1.799791132412,0,0.242998226632099,0,7.17131936422703,0.314727528809989,0,0,0,4.2881719582402,0,0,0,0,0,0,0,0,0,3.3707013745959,1.32506888912221,0.129282956361551,1.85125642439766,0,0,25.8425538413821,2.51526888159466,16.1553231585406,84.3482237080316,0.197611631897944,0,0,0,1.0027595760908,0.306345576763462,0,0,0,0,0.250381861413,2.29363678276028,1.55300672151593,1.98708489412427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,10.9121772950058,8.90194430099533,0.654261577023377,0,0,0,254.183980131616,0.106691729694141,0,0,0,0,1.24415452006595,0,0,0,0,0.678930119816101,0,0,0,0,0,0,0,0,0.3211461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| ||
|short_description=p1@CD2 | |short_description=p1@CD2 | ||
}} | }} |
Latest revision as of 09:41, 16 September 2015
Short description: | p1@CD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000369477, NM_001767, uc001egu.3, uc010owz.1, uc010oxa.1_5end |
EntrezGene: | CD2 |
HGNC: | 1639 |
UniProt: | Q5JVN7P06729Q53F96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.18e-23 | 98 |
blood island | 1.18e-23 | 98 |
hemolymphoid system | 7.45e-22 | 108 |
adult organism | 3.81e-20 | 114 |
immune system | 1.56e-14 | 93 |
bone marrow | 3.70e-12 | 76 |
bone element | 2.03e-10 | 82 |
blood | 3.80e-10 | 15 |
haemolymphatic fluid | 3.80e-10 | 15 |
organism substance | 3.80e-10 | 15 |
skeletal element | 1.64e-08 | 90 |
lateral plate mesoderm | 6.15e-07 | 203 |