FFCP PHASE1:Hg19::chr3:159571012..159571017,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29970 | |EntrezGene=29970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |HGNC=15678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=231bp_to_ENST00000482885_5end | |association_with_transcript=231bp_to_ENST00000482885_5end | ||
|cluster_id=chr3:159571012..159571017,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_51_at_SCHIP1_5end | |description=CAGE_peak_51_at_SCHIP1_5end | ||
|id=chr3:159571012..159571017,+ | |id=chr3:159571012..159571017,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.92e-16!24;CL:0000115!6.09e-12!35;CL:0002543!1.70e-11!6;CL:0005020!3.18e-11!6;CL:0002138!3.18e-11!6;CL:0005022!3.18e-11!6;CL:0000213!1.12e-10!57;CL:0000215!1.12e-10!57;CL:0002618!6.28e-09!3;CL:0002078!8.47e-09!44;CL:0000071!1.77e-08!18;CL:0002546!1.77e-08!18 | |ontology_enrichment_celltype=CL:0002139!2.92e-16!24;CL:0000115!6.09e-12!35;CL:0002543!1.70e-11!6;CL:0005020!3.18e-11!6;CL:0002138!3.18e-11!6;CL:0005022!3.18e-11!6;CL:0000213!1.12e-10!57;CL:0000215!1.12e-10!57;CL:0002618!6.28e-09!3;CL:0002078!8.47e-09!44;CL:0000071!1.77e-08!18;CL:0002546!1.77e-08!18 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;4.72e-17;1!UBERON:0010227;8.85e-17;1!UBERON:0004140;8.85e-17;1!UBERON:0008814;7.49e-09;2!UBERON:0010056;7.49e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;4.70e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001723!5.64e-09!3;UBERON:0001033!5.64e-09!3;UBERON:0010056!5.64e-09!3;UBERON:0001986!1.77e-08!18;UBERON:0004638!1.77e-08!18;UBERON:0004852!1.77e-08!18;UBERON:0001473!2.62e-08!8;UBERON:0004536!2.62e-08!8;UBERON:0006558!2.62e-08!8;UBERON:0001638!1.65e-07!9;UBERON:0003920!1.65e-07!9;UBERON:0004582!1.65e-07!9;UBERON:0003103!4.96e-07!69;UBERON:0001630!7.25e-07!2;UBERON:0005090!7.25e-07!2;UBERON:0000341!8.56e-07!2 | |ontology_enrichment_uberon=UBERON:0001723!5.64e-09!3;UBERON:0001033!5.64e-09!3;UBERON:0010056!5.64e-09!3;UBERON:0001986!1.77e-08!18;UBERON:0004638!1.77e-08!18;UBERON:0004852!1.77e-08!18;UBERON:0001473!2.62e-08!8;UBERON:0004536!2.62e-08!8;UBERON:0006558!2.62e-08!8;UBERON:0001638!1.65e-07!9;UBERON:0003920!1.65e-07!9;UBERON:0004582!1.65e-07!9;UBERON:0003103!4.96e-07!69;UBERON:0001630!7.25e-07!2;UBERON:0005090!7.25e-07!2;UBERON:0000341!8.56e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0005090;6.41e-31;2!UBERON:0001630;6.41e-31;2!UBERON:0004151;1.05e-21;3!UBERON:0001723;2.95e-21;3!UBERON:0001033;2.95e-21;3!UBERON:0002084;4.72e-17;1!UBERON:0002082;4.72e-17;1!UBERON:0002079;8.85e-17;1!UBERON:0001389;2.25e-16;1!UBERON:0000026;2.25e-16;1!UBERON:0008784;2.25e-16;1!UBERON:0006058;2.25e-16;1!UBERON:0002426;2.25e-16;1!UBERON:0003831;2.25e-16;1!UBERON:0003898;2.25e-16;1!UBERON:0004830;2.25e-16;1!UBERON:0003663;2.25e-16;1!UBERON:0004256;2.25e-16;1!UBERON:0004708;2.25e-16;1!UBERON:0002101;2.25e-16;1!UBERON:0004709;2.25e-16;1!UBERON:0003830;2.25e-16;1!UBERON:0005175;2.25e-16;1!UBERON:0002529;2.25e-16;1!UBERON:0010538;2.25e-16;1!UBERON:0003661;2.25e-16;1!UBERON:0010890;2.25e-16;1!UBERON:0002471;2.25e-16;1!UBERON:0001774;2.25e-16;1!UBERON:0001383;2.25e-16;1!UBERON:0010758;2.25e-16;1!UBERON:0010707;2.25e-16;1!UBERON:0001103;2.25e-16;1!UBERON:0000978;2.25e-16;1!UBERON:0002103;2.25e-16;1!UBERON:0001665;2.25e-16;1!UBERON:0003823;2.25e-16;1!UBERON:0000154;2.25e-16;1!UBERON:0010709;2.25e-16;1!UBERON:0001134;1.52e-15;16!UBERON:0002036;1.52e-15;16!UBERON:0007100;1.65e-15;25!UBERON:0002081;4.70e-09;2!UBERON:0000341;7.49e-09;2!UBERON:0002385;1.99e-08;31!UBERON:0001015;1.99e-08;31!UBERON:0000383;1.99e-08;31!UBERON:0000948;6.10e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,6.41e-31,2;UBERON:0001630,6.41e-31,2;UBERON:0004151,1.17e-21,3;UBERON:0001723,2.96e-21,3;UBERON:0001033,2.96e-21,3;UBERON:0010056,2.96e-21,3;UBERON:0002084,4.72e-17,1;UBERON:0002082,4.72e-17,1;UBERON:0010226,4.72e-17,1;UBERON:0002079,1.04e-16,1;UBERON:0002426,1.93e-16,1;UBERON:0003831,1.93e-16,1;UBERON:0003898,1.93e-16,1;UBERON:0004830,1.93e-16,1;UBERON:0003830,1.93e-16,1;UBERON:0005175,1.93e-16,1;UBERON:0001774,1.93e-16,1;UBERON:0001103,1.93e-16,1;UBERON:0010084,1.93e-16,1;UBERON:0005418,2.63e-16,1;UBERON:0001389,2.63e-16,1;UBERON:0000026,2.63e-16,1;UBERON:0008784,2.63e-16,1;UBERON:0006058,2.63e-16,1;UBERON:0003663,2.63e-16,1;UBERON:0004256,2.63e-16,1;UBERON:0004708,2.63e-16,1;UBERON:0002101,2.63e-16,1;UBERON:0004709,2.63e-16,1;UBERON:0002529,2.63e-16,1;UBERON:0010538,2.63e-16,1;UBERON:0003661,2.63e-16,1;UBERON:0010890,2.63e-16,1;UBERON:0002471,2.63e-16,1;UBERON:0001383,2.63e-16,1;UBERON:0004357,2.63e-16,1;UBERON:0004347,2.63e-16,1;UBERON:0005420,2.63e-16,1;UBERON:0005732,2.63e-16,1;UBERON:0010758,2.63e-16,1;UBERON:0010707,2.63e-16,1;UBERON:0000978,2.63e-16,1;UBERON:0002103,2.63e-16,1;UBERON:0001665,2.63e-16,1;UBERON:0003823,2.63e-16,1;UBERON:0000154,2.63e-16,1;UBERON:0010709,2.63e-16,1;UBERON:0005733,2.63e-16,1;UBERON:0005730,2.63e-16,1;UBERON:0007100,2.24e-14,27;UBERON:0003103,1.16e-10,68;UBERON:0002081,5.08e-09,2;UBERON:0010227,5.08e-09,2;UBERON:0000341,8.74e-09,2;UBERON:0007023,6.18e-08,114;UBERON:0001042,4.96e-07,10;UBERON:0009145,4.96e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0.71153252537342,0.66944122552934,0,0,0.24406205754817,0,0,0.982297011124877,0.22452937262617,0.450445921933289,1.53316637465883,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916641696046735,0,0,2.57535628881943,2.00854311697685,2.62015542698232,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0.105600336519406,0,0,2.1440859791201,3.31045985182716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,2.46390736454993,2.3196288626764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.0661699095049,0.952257725854961,0,0,0,0,0,1.74173398317569,2.05339980651169,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0.71153252537342,0.66944122552934,0,0,0.24406205754817,0,0,0.982297011124877,0.22452937262617,0.450445921933289,1.53316637465883,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916641696046735,0,0,2.57535628881943,2.00854311697685,2.62015542698232,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0.105600336519406,0,0,2.1440859791201,3.31045985182716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,2.46390736454993,2.3196288626764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.0661699095049,0.952257725854961,0,0,0,0,0,1.74173398317569,2.05339980651169,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p51@SCHIP1 | |short_description=p51@SCHIP1 | ||
}} | }} |
Latest revision as of 09:51, 16 September 2015
Short description: | p51@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_51_at_SCHIP1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 231bp_to_ENST00000482885_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 4.02e-09 | 2 |