FFCP PHASE1:Hg19::chr7:134331550..134331593,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:134331550..134331593,+
|short_description=p2@BPGM
|description=CAGE_peak_2_at_BPGM_5end
|association_with_transcript=0bp_to_ENST00000344924,ENST00000393132...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=669 | |EntrezGene=669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1093 | |HGNC=1093 | ||
|TSSclassifier=strong | |||
|UniProt=P07738 | |UniProt=P07738 | ||
|association_with_transcript=0bp_to_ENST00000344924,ENST00000393132,ENST00000418040_5end | |||
|cluster_id=chr7:134331550..134331593,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_2_at_BPGM_5end | |||
|id=chr7:134331550..134331593,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.21e-21!82;UBERON:0007023!6.14e-21!115;UBERON:0005743!9.23e-21!86;UBERON:0000073!3.28e-19!94;UBERON:0001016!3.28e-19!94;UBERON:0001049!3.59e-18!57;UBERON:0005068!3.59e-18!57;UBERON:0006241!3.59e-18!57;UBERON:0007135!3.59e-18!57;UBERON:0002616!5.33e-17!59;UBERON:0000955!6.99e-17!69;UBERON:0006238!6.99e-17!69;UBERON:0002780!1.27e-15!41;UBERON:0001890!1.27e-15!41;UBERON:0006240!1.27e-15!41;UBERON:0003080!1.30e-15!42;UBERON:0004121!9.67e-13!169;UBERON:0000033!1.47e-12!123;UBERON:0003075!2.96e-12!86;UBERON:0007284!2.96e-12!86;UBERON:0002020!7.08e-12!34;UBERON:0003528!7.08e-12!34;UBERON:0000153!7.89e-12!129;UBERON:0007811!7.89e-12!129;UBERON:0001893!7.98e-12!34;UBERON:0000924!1.41e-11!173;UBERON:0006601!1.41e-11!173;UBERON:0002791!2.64e-11!33;UBERON:0001869!4.30e-11!32;UBERON:0002346!1.29e-10!90;UBERON:0003056!1.12e-09!61;UBERON:0000956!1.63e-08!25;UBERON:0000203!1.63e-08!25;UBERON:0002619!1.33e-07!22;UBERON:0001950!8.52e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.44e-11;41!UBERON:0001890;3.44e-11;41!UBERON:0003528;1.99e-10;34!UBERON:0002020;1.99e-10;34!UBERON:0001893;2.34e-10;34!UBERON:0000073;2.44e-10;53!UBERON:0002616;2.44e-10;53!UBERON:0001869;4.21e-10;32!UBERON:0002791;5.61e-10;32!UBERON:0000956;1.65e-08;25!UBERON:0000203;1.65e-08;25!UBERON:0000955;2.23e-08;68!UBERON:0001017;4.41e-08;75!UBERON:0002619;1.44e-07;22!UBERON:0001016;7.98e-07;83!UBERON:0001950;9.42e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.47e-21,81;UBERON:0007023,1.01e-20,114;UBERON:0001016,1.23e-19,89;UBERON:0001049,3.72e-18,56;UBERON:0005068,3.72e-18,56;UBERON:0006241,3.72e-18,56;UBERON:0007135,3.72e-18,56;UBERON:0000955,7.83e-17,68;UBERON:0006238,7.83e-17,68;UBERON:0000073,1.11e-16,53;UBERON:0002616,1.11e-16,53;UBERON:0002780,1.27e-15,41;UBERON:0001890,1.27e-15,41;UBERON:0003080,1.27e-15,41;UBERON:0006240,1.27e-15,41;UBERON:0003075,2.62e-12,82;UBERON:0007284,2.62e-12,82;UBERON:0003528,7.08e-12,34;UBERON:0002020,7.08e-12,34;UBERON:0001893,7.98e-12,34;UBERON:0004121,2.32e-11,171;UBERON:0000924,2.32e-11,171;UBERON:0006601,2.32e-11,171;UBERON:0001869,4.30e-11,32;UBERON:0002791,6.34e-11,32;UBERON:0002346,1.28e-10,86;UBERON:0003056,4.57e-10,61;UBERON:0010314,1.27e-09,132;UBERON:0010371,1.02e-08,104;UBERON:0000956,1.63e-08,25;UBERON:0000203,1.63e-08,25;UBERON:0002619,1.33e-07,22;UBERON:0001950,8.52e-07,20 | |||
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| ||
|short_description=p2@BPGM | |||
}} | }} |
Latest revision as of 11:26, 16 September 2015
Short description: | p2@BPGM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BPGM_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000344924, ENST00000393132, ENST00000418040_5end |
EntrezGene: | BPGM |
HGNC: | 1093 |
UniProt: | P07738 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.47e-21 | 81 |
adult organism | 1.01e-20 | 114 |
nervous system | 1.23e-19 | 89 |
neural tube | 3.72e-18 | 56 |
neural rod | 3.72e-18 | 56 |
future spinal cord | 3.72e-18 | 56 |
neural keel | 3.72e-18 | 56 |
brain | 7.83e-17 | 68 |
future brain | 7.83e-17 | 68 |
regional part of nervous system | 1.11e-16 | 53 |
regional part of brain | 1.11e-16 | 53 |
regional part of forebrain | 1.27e-15 | 41 |
forebrain | 1.27e-15 | 41 |
anterior neural tube | 1.27e-15 | 41 |
future forebrain | 1.27e-15 | 41 |
neural plate | 2.62e-12 | 82 |
presumptive neural plate | 2.62e-12 | 82 |
brain grey matter | 7.08e-12 | 34 |
gray matter | 7.08e-12 | 34 |
telencephalon | 7.98e-12 | 34 |
ectoderm-derived structure | 2.32e-11 | 171 |
ectoderm | 2.32e-11 | 171 |
presumptive ectoderm | 2.32e-11 | 171 |
cerebral hemisphere | 4.30e-11 | 32 |
regional part of telencephalon | 6.34e-11 | 32 |
neurectoderm | 1.28e-10 | 86 |
pre-chordal neural plate | 4.57e-10 | 61 |
structure with developmental contribution from neural crest | 1.27e-09 | 132 |
ecto-epithelium | 1.02e-08 | 104 |
cerebral cortex | 1.63e-08 | 25 |
pallium | 1.63e-08 | 25 |
regional part of cerebral cortex | 1.33e-07 | 22 |
neocortex | 8.52e-07 | 20 |