FFCP PHASE1:Hg19::chr7:134576237..134576280,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1441 | |||
|TSSclassifier=strong | |||
|UniProt=E9PGZ1 | |||
|association_with_transcript=28bp_to_ENST00000443197_5end | |||
|cluster_id=chr7:134576237..134576280,+ | |||
|coexpression_cluster_id=C2879 | |||
|description=CAGE_peak_5_at_CALD1_5end | |||
|id=chr7:134576237..134576280,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.35e-09!180;CL:0000057!1.21e-07!75;CL:0000223!8.24e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.05e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!4.28e-26!347;UBERON:0000475!9.87e-25!365;UBERON:0004119!1.22e-16!169;UBERON:0000925!1.22e-16!169;UBERON:0006595!1.22e-16!169;UBERON:0000468!3.71e-16!659;UBERON:0003104!9.14e-16!238;UBERON:0009142!9.14e-16!238;UBERON:0001007!1.86e-14!155;UBERON:0001555!1.86e-14!155;UBERON:0007026!1.86e-14!155;UBERON:0000467!2.34e-13!625;UBERON:0000922!2.63e-13!612;UBERON:0000480!4.42e-13!626;UBERON:0002100!5.74e-13!216;UBERON:0000119!8.29e-13!312;UBERON:0002050!9.45e-13!605;UBERON:0005423!9.45e-13!605;UBERON:0000923!1.41e-12!604;UBERON:0005291!1.41e-12!604;UBERON:0006598!1.41e-12!604;UBERON:0002532!1.41e-12!604;UBERON:0000483!2.63e-12!309;UBERON:0000062!3.73e-12!511;UBERON:0003102!1.98e-11!95;UBERON:0000077!2.75e-11!130;UBERON:0005256!2.98e-11!143;UBERON:0000477!3.78e-11!286;UBERON:0000924!3.78e-11!173;UBERON:0006601!3.78e-11!173;UBERON:0004121!4.47e-11!169;UBERON:0004921!5.11e-11!129;UBERON:0004185!5.11e-11!129;UBERON:0000064!7.78e-10!219;UBERON:0002530!7.06e-09!59;UBERON:0001048!1.08e-08!168;UBERON:0000161!3.34e-08!35;UBERON:0000033!8.84e-08!123;UBERON:0002365!2.22e-07!31;UBERON:0002330!2.22e-07!31;UBERON:0007023!2.40e-07!115;UBERON:0004111!2.83e-07!241;UBERON:0000153!4.20e-07!129;UBERON:0007811!4.20e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;5.10e-07;31!UBERON:0002330;5.10e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,7.18e-17,223;UBERON:0004119,5.19e-16,160;UBERON:0000925,5.19e-16,160;UBERON:0006595,5.19e-16,160;UBERON:0001007,1.90e-13,145;UBERON:0001555,1.90e-13,145;UBERON:0007026,1.90e-13,145;UBERON:0003102,2.40e-12,99;UBERON:0000119,7.66e-12,309;UBERON:0003104,1.36e-11,160;UBERON:0009142,1.36e-11,160;UBERON:0000483,2.34e-11,306;UBERON:0004121,6.71e-11,171;UBERON:0000924,6.71e-11,171;UBERON:0006601,6.71e-11,171;UBERON:0000922,2.01e-10,592;UBERON:0004921,3.75e-10,118;UBERON:0002100,3.91e-10,199;UBERON:0005423,7.16e-10,581;UBERON:0005256,2.56e-09,122;UBERON:0002050,6.20e-09,564;UBERON:0002530,9.22e-09,59;UBERON:0001048,1.00e-08,160;UBERON:0000923,2.01e-08,560;UBERON:0010316,2.01e-08,560;UBERON:0005291,2.01e-08,560;UBERON:0006598,2.01e-08,560;UBERON:0010317,2.01e-08,560;UBERON:0002532,2.01e-08,560;UBERON:0000161,4.69e-08,36;UBERON:0004923,6.44e-08,66;UBERON:0010314,1.59e-07,132;UBERON:0007023,1.76e-07,114;UBERON:0002365,4.43e-07,31;UBERON:0002330,4.43e-07,31 | |||
|phase1_expression=22.7097974088196,49.0290199710351,18.6059813406682,10.007329835313,19.6662881548007,6.97870819280295,2.53299878168311,27.7956744307806,9.92505387159386,2.94880723801811,1.39560233594486,20.9703717244965,12.3970479767373,24.1344388272091,17.8954582893075,6.72325146451775,4.82155622419182,2.19093027116212,3.90346239032406,4.55547914884115,2.04000691244253,3.44800193625897,2.28988789704845,4.10623275218653,3.26410862946487,0,0.0821005894499457,0,0,0,0.309632246632152,14.7107395916628,6.92773613189975,9.61360426433648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,8.71911117614727,7.41602858692476,10.843174571537,8.02140657017423,15.643424047769,8.74814541756209,5.35298357332899,5.2939497611878,3.54767035940102,2.81071314218003,8.12070268085818,3.64295288292542,5.56176664176644,0,0.174129737299267,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0.516833518338658,0.71153252537342,1.00416183829401,0.805658634218294,5.32190474002959,3.41686880567437,0.367663080345869,0,3.12549048994279,1.57170560838319,3.49095589498299,0,0,0,0,0,8.72188104285069,0.496971951695318,4.55869841992487,1.45650098894541,9.46560848471085,13.1227301413392,1.68203280042692,1.06748995729705,1.72667283892012,38.2789573541713,8.48677234039035,8.99040467124023,36.9312123453633,25.35174067712,15.2308930691968,21.5390453012921,10.2684927878001,34.8215425685696,25.2484172084094,31.7270970961538,24.4384403661912,49.2011552724293,15.1086210293475,82.2473218159093,9.50402285825643,7.66527480763526,29.1251635820168,13.6537446945085,16.3286030535444,23.3971632160573,42.1137455535958,4.82875382968922,2.75839016219118,4.5071417671979,3.85669422744072,4.12596162084383,3.20336083227851,6.14602513362729,7.50227740211006,18.6525077921574,3.60696756063881,4.09457083929498,7.59493495085698,7.1129013767675,7.57301322732343,8.74474037101844,38.4717615228772,4.26011511019937,3.82857973265033,3.89989362314122,17.7799984910233,13.6373060295417,25.2388043942323,3.04934265323988,3.71083351300159,5.80969714347592,6.53064646596834,9.08355063152262,0.72995471815166,0,7.71889125831462,1.38134921352481,25.5402360417588,38.9814920101576,19.7572356066539,21.4102556399189,15.9067279723098,17.0955657735211,17.2124760833001,14.4735077657769,18.6067205261027,17.2674889310305,17.698369219534,0.738155454624648,2.80483547606892,9.4662022606222,5.88034845542168,70.9828195002253,32.4332981503617,37.8105540276099,0,12.2988438543114,11.4950432900012,35.1200913307602,3.37205259772859,10.1534262135747,18.88804281234,6.84197441151682,12.4792174233549,0,9.27443239800615,2.34817388471643,1.44366447761074,0.925971025153221,6.27838702374174,0,0,0,0,0,11.2480600784132,7.22323151255096,11.6255579738757,19.8819920400323,17.7286702493517,11.1180976957911,0,0,0.207328115540772,0.288239906833923,0.75745460055828,11.3661230782983,3.05590740446622,5.86087236050235,6.84289784090821,7.50640696734262,9.31063479316144,16.5779330925735,11.2131084345361,9.15516144549888,16.2810994522509,0.517086863031111,21.4593867511129,16.90605505112,1.86156681609409,3.12022310734098,4.8869401109807,1.41849132023278,3.72991050622539,29.1675107062621,36.3556475612267,17.2880470723961,17.9154901361554,27.365180053176,7.12756685640086,13.5647719676814,4.35766729300147,10.9970290300263,0,0,0,0,2.29723871668228,32.8064881593652,14.3333493600903,24.4516823834956,24.3522910006258,0,0,0,0,22.1062323073543,15.6167824629146,3.09315525111078,3.18280904135263,5.74144876487847,0,0,0,21.7163940342878,17.5059682370887,10.5793359242897,3.74347550755453,4.10386674233472,3.15404830067869,7.84847480451178,2.40756879782175,2.27407504055985,19.6598835455759,2.65690239414175,1.29058417979192,36.1435836187225,11.5522682903017,10.6374461381365,0,0,0,8.48757200049526,19.9722527412596,20.8649302397479,12.1572825831201,6.1384789315225,3.64858122762996,7.81648810459776,7.16390148693385,2.2519548960105,4.45254199334973,12.3367755042124,18.4664194325652,25.4594183642808,25.4434670299974,12.2020897382957,8.21844257223031,16.4415305648694,17.4033069088844,14.8110638132343,18.7553903046919,19.6686622439136,2.25599806453706,6.7773496651885,2.35304930753057,7.30696123266303,8.33857868253718,1.13733384070897,0.340187410553031,3.02282282542995,1.54227252690289,3.52230368807009,0.501689773854853,3.3133915495855,3.3243040357149,3.80587083027703,0,0,3.84675187674584,1.96808787419823,4.22991913063594,34.6217799136347,0,0,19.5250282918699,22.1020483652417,6.42735719376638,14.6939491804025,24.0315842698845,27.6306614507033,15.0241864008138,65.5263493696469,39.7345741324986,21.136203599193,6.85546674479878,26.9414412038394,22.8706180164476,23.3531263865089,37.6306944782646,2.78907329578371,2.51849877464512,3.485186350803,3.69640296211307,1.06461206063404,4.34966496037536,0.18532421910392,0.572499546967965,22.32950216158,1.8982765483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| |||
|short_description=p5@CALD1 | |||
}} |
Latest revision as of 11:49, 16 September 2015
Short description: | p5@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CALD1_5end |
Coexpression cluster: | C2879_salivary_Fibroblast_vagina_liver_Hepatocyte_Skeletal_hepatoblastoma |
Association with transcript: | 28bp_to_ENST00000443197_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | E9PGZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.05e-07 | 76 |