FFCP PHASE1:Hg19::chr3:16327784..16327795,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92106 | |EntrezGene=92106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=25128 | |HGNC=25128 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-64bp_to_AL832787_5end | |association_with_transcript=-64bp_to_AL832787_5end | ||
|cluster_id=chr3:16327784..16327795,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_4_at_OXNAD1_5end | |description=CAGE_peak_4_at_OXNAD1_5end | ||
|id=chr3:16327784..16327795,+ | |id=chr3:16327784..16327795,+ | ||
|ontology_enrichment_celltype=CL:0000791!9.97e-32!18;CL:0000789!9.97e-32!18;CL:0002420!9.97e-32!18;CL:0002419!9.97e-32!18;CL:0000790!9.97e-32!18;CL:0000084!9.41e-29!25;CL:0000827!9.41e-29!25;CL:0000625!2.29e-20!11;CL:0000838!7.28e-17!52;CL:0000542!2.15e-16!53;CL:0000051!2.15e-16!53;CL:0000738!1.04e-15!140;CL:0002087!1.04e-13!119;CL:0000624!1.08e-11!6;CL:0000037!2.30e-10!172;CL:0000566!2.30e-10!172;CL:0002031!4.19e-10!124;CL:0000988!4.01e-09!182;CL:0002032!1.46e-08!165;CL:0000837!1.46e-08!165;CL:0000898!9.30e-07!3 | |ontology_enrichment_celltype=CL:0000791!9.97e-32!18;CL:0000789!9.97e-32!18;CL:0002420!9.97e-32!18;CL:0002419!9.97e-32!18;CL:0000790!9.97e-32!18;CL:0000084!9.41e-29!25;CL:0000827!9.41e-29!25;CL:0000625!2.29e-20!11;CL:0000838!7.28e-17!52;CL:0000542!2.15e-16!53;CL:0000051!2.15e-16!53;CL:0000738!1.04e-15!140;CL:0002087!1.04e-13!119;CL:0000624!1.08e-11!6;CL:0000037!2.30e-10!172;CL:0000566!2.30e-10!172;CL:0002031!4.19e-10!124;CL:0000988!4.01e-09!182;CL:0002032!1.46e-08!165;CL:0000837!1.46e-08!165;CL:0000898!9.30e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;8.57e-48;18!CL:0000789;8.57e-48;18!CL:0002419;8.57e-48;18!CL:0000084;3.34e-41;25!CL:0000625;1.33e-33;11!CL:0000624;7.87e-19;6!CL:0000542;1.66e-12;53!CL:0000898;1.95e-10;3!CL:0000226;7.90e-10;3!CL:0000842;7.90e-10;3!CL:0000623;3.15e-09;3!CL:0000815;1.81e-07;2!CL:0000792;1.81e-07;2!CL:0002677;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.11e-48,18;CL:0000789,8.11e-48,18;CL:0002420,8.11e-48,18;CL:0002419,8.11e-48,18;CL:0000790,8.11e-48,18;CL:0000084,3.76e-41,25;CL:0000827,3.76e-41,25;CL:0000625,1.22e-33,11;CL:0000838,2.47e-23,52;CL:0000542,8.85e-23,53;CL:0000051,8.85e-23,53;CL:0000624,8.12e-19,6;CL:0000738,2.70e-14,136;CL:0002087,2.44e-13,115;CL:0000898,2.01e-10,3;CL:0000037,4.25e-10,168;CL:0000226,7.33e-10,3;CL:0000842,7.33e-10,3;CL:0002031,2.42e-09,120;CL:0000623,2.88e-09,3;CL:0000825,2.88e-09,3;CL:0000988,3.33e-09,177;CL:0002032,2.87e-08,161;CL:0000837,2.87e-08,161;CL:0000815,1.87e-07,2;CL:0000792,1.87e-07,2;CL:0002677,1.87e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;8.57e-48;18!CL:0000051;1.66e-12;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!9.20e-16!15;UBERON:0000179!9.20e-16!15;UBERON:0000463!9.20e-16!15;UBERON:0007023!2.12e-12!115;UBERON:0004177!1.57e-08!7;UBERON:0002390!6.77e-08!102;UBERON:0003061!6.77e-08!102;UBERON:0002193!7.39e-08!112;UBERON:0002370!1.36e-07!4;UBERON:0005058!1.36e-07!4;UBERON:0009113!1.36e-07!4;UBERON:0003295!1.36e-07!4;UBERON:0005562!1.36e-07!4 | |ontology_enrichment_uberon=UBERON:0000178!9.20e-16!15;UBERON:0000179!9.20e-16!15;UBERON:0000463!9.20e-16!15;UBERON:0007023!2.12e-12!115;UBERON:0004177!1.57e-08!7;UBERON:0002390!6.77e-08!102;UBERON:0003061!6.77e-08!102;UBERON:0002193!7.39e-08!112;UBERON:0002370!1.36e-07!4;UBERON:0005058!1.36e-07!4;UBERON:0009113!1.36e-07!4;UBERON:0003295!1.36e-07!4;UBERON:0005562!1.36e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.30e-26;15!UBERON:0000179;1.30e-26;15!UBERON:0000463;1.30e-26;15!UBERON:0002390;5.55e-16;32!UBERON:0002193;3.19e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.24e-26,15;UBERON:0000179,1.24e-26,15;UBERON:0000463,1.24e-26,15;UBERON:0002370,2.46e-07,4;UBERON:0005058,2.46e-07,4;UBERON:0009113,2.46e-07,4;UBERON:0003295,2.46e-07,4;UBERON:0005562,2.46e-07,4;UBERON:0004177,6.79e-07,7;UBERON:0005057,6.79e-07,7 | |||
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| ||
|short_description=p4@OXNAD1 | |short_description=p4@OXNAD1 | ||
}} | }} |
Latest revision as of 12:02, 16 September 2015
Short description: | p4@OXNAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_OXNAD1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -64bp_to_AL832787_5end |
EntrezGene: | OXNAD1 |
HGNC: | 25128 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.11e-48 | 18 |
alpha-beta T cell | 8.11e-48 | 18 |
immature T cell | 8.11e-48 | 18 |
mature T cell | 8.11e-48 | 18 |
immature alpha-beta T cell | 8.11e-48 | 18 |
T cell | 3.76e-41 | 25 |
pro-T cell | 3.76e-41 | 25 |
CD8-positive, alpha-beta T cell | 1.22e-33 | 11 |
lymphoid lineage restricted progenitor cell | 2.47e-23 | 52 |
lymphocyte | 8.85e-23 | 53 |
common lymphoid progenitor | 8.85e-23 | 53 |
CD4-positive, alpha-beta T cell | 8.12e-19 | 6 |
leukocyte | 2.70e-14 | 136 |
nongranular leukocyte | 2.44e-13 | 115 |
naive T cell | 2.01e-10 | 3 |
hematopoietic stem cell | 4.25e-10 | 168 |
single nucleate cell | 7.33e-10 | 3 |
mononuclear cell | 7.33e-10 | 3 |
hematopoietic lineage restricted progenitor cell | 2.42e-09 | 120 |
natural killer cell | 2.88e-09 | 3 |
pro-NK cell | 2.88e-09 | 3 |
hematopoietic cell | 3.33e-09 | 177 |
hematopoietic oligopotent progenitor cell | 2.87e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.87e-08 | 161 |
regulatory T cell | 1.87e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.87e-07 | 2 |
naive regulatory T cell | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.24e-26 | 15 |
haemolymphatic fluid | 1.24e-26 | 15 |
organism substance | 1.24e-26 | 15 |
thymus | 2.46e-07 | 4 |
hemolymphoid system gland | 2.46e-07 | 4 |
thymic region | 2.46e-07 | 4 |
pharyngeal gland | 2.46e-07 | 4 |
thymus primordium | 2.46e-07 | 4 |
hemopoietic organ | 6.79e-07 | 7 |
immune organ | 6.79e-07 | 7 |