FFCP PHASE1:Hg19::chr7:134618321..134618341,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=252bp_to_BX648808_5end | |association_with_transcript=252bp_to_BX648808_5end | ||
|cluster_id=chr7:134618321..134618341,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_14_at_CALD1_5end | |description=CAGE_peak_14_at_CALD1_5end | ||
|id=chr7:134618321..134618341,+ | |id=chr7:134618321..134618341,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.92e-26!115;UBERON:0001049!2.89e-12!57;UBERON:0005068!2.89e-12!57;UBERON:0006241!2.89e-12!57;UBERON:0007135!2.89e-12!57;UBERON:0001017!7.58e-12!82;UBERON:0000073!2.66e-11!94;UBERON:0001016!2.66e-11!94;UBERON:0000468!3.94e-11!659;UBERON:0005743!8.91e-11!86;UBERON:0000062!9.90e-11!511;UBERON:0000955!1.14e-10!69;UBERON:0006238!1.14e-10!69;UBERON:0000924!1.68e-10!173;UBERON:0006601!1.68e-10!173;UBERON:0002616!1.85e-10!59;UBERON:0002346!2.77e-10!90;UBERON:0004121!3.47e-10!169;UBERON:0003075!5.18e-10!86;UBERON:0007284!5.18e-10!86;UBERON:0002780!8.15e-10!41;UBERON:0001890!8.15e-10!41;UBERON:0006240!8.15e-10!41;UBERON:0003080!3.04e-09!42;UBERON:0002020!5.45e-09!34;UBERON:0003528!5.45e-09!34;UBERON:0000467!6.46e-09!625;UBERON:0000033!8.77e-09!123;UBERON:0000480!9.38e-09!626;UBERON:0001893!1.28e-08!34;UBERON:0002791!1.55e-08!33;UBERON:0000153!3.03e-08!129;UBERON:0007811!3.03e-08!129;UBERON:0001869!6.21e-08!32;UBERON:0000475!8.38e-08!365;UBERON:0000481!2.31e-07!347;UBERON:0000477!2.80e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.63e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.28e-27,114;UBERON:0001049,1.00e-09,56;UBERON:0005068,1.00e-09,56;UBERON:0006241,1.00e-09,56;UBERON:0007135,1.00e-09,56;UBERON:0001017,2.92e-09,81;UBERON:0000955,3.57e-09,68;UBERON:0006238,3.57e-09,68;UBERON:0000073,3.80e-09,53;UBERON:0002616,3.80e-09,53;UBERON:0003075,5.30e-09,82;UBERON:0007284,5.30e-09,82;UBERON:0002346,1.28e-08,86;UBERON:0001016,1.52e-08,89;UBERON:0011216,2.57e-08,223;UBERON:0004121,7.41e-08,171;UBERON:0000924,7.41e-08,171;UBERON:0006601,7.41e-08,171;UBERON:0010314,1.29e-07,132;UBERON:0010371,2.61e-07,104 | |||
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| ||
|short_description=p14@CALD1 | |short_description=p14@CALD1 | ||
}} | }} |
Latest revision as of 12:12, 16 September 2015
Short description: | p14@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CALD1_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 252bp_to_BX648808_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.28e-27 | 114 |
neural tube | 1.00e-09 | 56 |
neural rod | 1.00e-09 | 56 |
future spinal cord | 1.00e-09 | 56 |
neural keel | 1.00e-09 | 56 |
central nervous system | 2.92e-09 | 81 |
brain | 3.57e-09 | 68 |
future brain | 3.57e-09 | 68 |
regional part of nervous system | 3.80e-09 | 53 |
regional part of brain | 3.80e-09 | 53 |
neural plate | 5.30e-09 | 82 |
presumptive neural plate | 5.30e-09 | 82 |
neurectoderm | 1.28e-08 | 86 |
nervous system | 1.52e-08 | 89 |
organ system subdivision | 2.57e-08 | 223 |
ectoderm-derived structure | 7.41e-08 | 171 |
ectoderm | 7.41e-08 | 171 |
presumptive ectoderm | 7.41e-08 | 171 |
structure with developmental contribution from neural crest | 1.29e-07 | 132 |
ecto-epithelium | 2.61e-07 | 104 |