FFCP PHASE1:Hg19::chr14:91526905..91526916,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:91526905..91526916,- to FFCP PHASE1:Hg19::chr14:91526905..91526916,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9252 | |EntrezGene=9252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10434 | |HGNC=10434 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4D7 | |UniProt=G3V4D7 | ||
|association_with_transcript=12bp_to_ENST00000556594_5end | |||
|cluster_id=chr14:91526905..91526916,- | |||
|coexpression_cluster_id=C2322 | |||
|description=CAGE_peak_3_at_RPS6KA5_5end | |||
|id=chr14:91526905..91526916,- | |||
|ontology_enrichment_celltype=CL:0002032!6.33e-12!165;CL:0000837!6.33e-12!165;CL:0000037!1.02e-11!172;CL:0000566!1.02e-11!172;CL:0000988!5.48e-10!182;CL:0000738!6.60e-08!140;CL:0002031!7.76e-07!124;CL:0000542!9.03e-07!53;CL:0000051!9.03e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.07e-10;5!CL:0000084;4.80e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.15e-10,5;CL:0002028,3.15e-10,5;CL:0002032,1.24e-08,161;CL:0000837,1.24e-08,161;CL:0000037,2.26e-08,168;CL:0000988,2.25e-07,177;CL:0000838,4.51e-07,52;CL:0000084,4.88e-07,25;CL:0000827,4.88e-07,25;CL:0000542,7.58e-07,53;CL:0000051,7.58e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.32e-16!115;UBERON:0001049!6.64e-12!57;UBERON:0005068!6.64e-12!57;UBERON:0006241!6.64e-12!57;UBERON:0007135!6.64e-12!57;UBERON:0000955!4.42e-11!69;UBERON:0006238!4.42e-11!69;UBERON:0003080!8.07e-10!42;UBERON:0002780!1.44e-09!41;UBERON:0001890!1.44e-09!41;UBERON:0006240!1.44e-09!41;UBERON:0001017!1.52e-09!82;UBERON:0002616!3.79e-09!59;UBERON:0001893!5.70e-09!34;UBERON:0002020!6.00e-09!34;UBERON:0003528!6.00e-09!34;UBERON:0002791!1.26e-08!33;UBERON:0005743!2.27e-08!86;UBERON:0001950!2.62e-08!20;UBERON:0001869!3.24e-08!32;UBERON:0002619!1.53e-07!22;UBERON:0000073!1.70e-07!94;UBERON:0001016!1.70e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.48e-09,56;UBERON:0005068,6.48e-09,56;UBERON:0006241,6.48e-09,56;UBERON:0007135,6.48e-09,56;UBERON:0000073,7.74e-09,53;UBERON:0002616,7.74e-09,53;UBERON:0002780,6.53e-07,41;UBERON:0001890,6.53e-07,41;UBERON:0003080,6.53e-07,41;UBERON:0006240,6.53e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0.125542639594803,1.14620108621927,1.06730766284929,0.550975469195755,0.786728553697808,1.53531759238885,0.619264493264304,0,0,1.84877005083394,1.00707360754392,0.568676929949686,1.76160263600908,0.553995408531877,0.802177789880567,1.95309783644267,0.447830948479849,0,0.257575567634187,0.581592955118259,0,0.242584061187816,0.929716147622738,0.822335776043652,0.619412741790207,0.575384784644301,0.512321413058201,0.709446689665756,2.06847408441971,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0.639337125799041,0.659702600373432,0.398927315243264,0.852449501065388,0,0.56738522469114,0.622822248995575,0,0,0.434377689410233,0,0,1.26584954976354,0.211255286311942,0.425208599930087,0.209658645508376,0.112328631146495,0.450530678524519,0.32145117339416,0.570025487482497,0.19891667719909,0.91332076882317,0,0,0,1.70692089026603,0.400395987036012,0,0,0.954053754535364,0.569212969109448,0,0.764546456250458,0,1.68152568894461,0,4.72103448273199,2.35806457649499,2.2616164889946,2.00623794468814,0.651844533267181,0,0,4.12218690475142,0.589211814949674,1.10766947291811,0.812411591295047,4.09892223122161,4.29195846947598,5.59088875652499,4.42160028457357,4.05724320029073,0.296573126324121,0.267540828089713,0,3.17266159553185,0.766440987203842,1.71813722741315,0.506039384039006,0.318565414324097,0,1.90090408889675,0.301150238155546,0.127986611154418,0,0.236777252044017,0,3.42731463482045,2.40696176205157,4.05508330871837,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.392937226493138,0.364295288292542,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0.44905874525234,1.0135033243499,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,1.06502877754984,0.201504196455281,0.169560592310488,0,0,0,0.121973706129595,0,0,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0.951270761172991,0,0,0.246217006087397,0,0.297262324577456,0,0,0,1.07470227243418,0.290633938513962,0,6.89728533054321,7.39606845711099,13.2689993946094,14.1237554348622,10.9830917080951,1.07946420296687,0.381988425558278,0,0,0.822619941626588,0.901029173531752,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,2.24170287987055,2.1673383622212,2.15627574859517,3.46526197955321,0,0,0,0.167516265334349,0,4.49404214368309,8.97484377612075,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0.368323955743585,0,0,0,0.451199612907412,0.231046011313244,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0,0.219259876645935,0,0,0,0,0.721287081534056,0.183138929636687,0.082509499920588,0,0,0,0,0,0.307007349452259,0.137836572484531,0,0,0.340906509664404,0,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0.411362273086194,0.648473311192717,0,0.79312517629427,0.213648142254946,3.84991942105343,0.735120647943095,0.371606350251437,0.721346064882224,0.142283686696828,0.159426272728822,2.3949524571938,1.1490322207942,2.75175657541048,0,0,0.684704037099577,0.313359791546046,2.50634477090067,0.338583555603207,0.802940375518498,0.605399121573143,2.55507742614196,0,0,0.223676107892416,0,0.586164286206121,2.22724939116194,0,1.89318974933188,1.33228787199128,1.4098700508785,0.18714054040822,0.146508179271894,0,2.67464122265948,0,0.71623345421307,0.296964680832639,0.614321404198464,0,0.562677665642051,0,2.47205811340139,1.05562704063997,0,1.65770349318689,0.251932747854276,0.306806047506464,0.246169610922139,0,2.06697207638852,0.179021174675609,1.53471711068062,1.08507746200627,2.3948309234694,0,0.969332746095218,0.927680981618513,3.99227596002388,0.7812832832557,1.57427999993152,0.724999575434793,0.455173793141999,0.762760950878299,1.18193840883968,0.689486746482929,0.291604613383254,0.868124974666461,0.885741385813839,0.844175070377856,12.2065389053667,5.86070077635491,2.36438095162838,1.53569778007781,0.32681539055697,0.975966209950223,0.692552326534174,0.227884111694002,0.46112780877612,0.448788222048861,0,0.638002319463839,0.183195186803725,0,1.02193298195737,1.56980256395025,0.997270091400938,0,0,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| ||
|short_description=p3@RPS6KA5 | |||
}} | }} |
Latest revision as of 12:53, 16 September 2015
Short description: | p3@RPS6KA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPS6KA5_5end |
Coexpression cluster: | C2322_Mast_Neutrophils_Eosinophils_granulocyte_cerebellum_Whole_CD4 |
Association with transcript: | 12bp_to_ENST00000556594_5end |
EntrezGene: | RPS6KA5 |
HGNC: | 10434 |
UniProt: | G3V4D7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.15e-10 | 5 |
basophil mast progenitor cell | 3.15e-10 | 5 |
hematopoietic oligopotent progenitor cell | 1.24e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-08 | 161 |
hematopoietic stem cell | 2.26e-08 | 168 |
hematopoietic cell | 2.25e-07 | 177 |
lymphoid lineage restricted progenitor cell | 4.51e-07 | 52 |
T cell | 4.88e-07 | 25 |
pro-T cell | 4.88e-07 | 25 |
lymphocyte | 7.58e-07 | 53 |
common lymphoid progenitor | 7.58e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
neural tube | 6.48e-09 | 56 |
neural rod | 6.48e-09 | 56 |
future spinal cord | 6.48e-09 | 56 |
neural keel | 6.48e-09 | 56 |
regional part of nervous system | 7.74e-09 | 53 |
regional part of brain | 7.74e-09 | 53 |
regional part of forebrain | 6.53e-07 | 41 |
forebrain | 6.53e-07 | 41 |
anterior neural tube | 6.53e-07 | 41 |
future forebrain | 6.53e-07 | 41 |