FFCP PHASE1:Hg19::chr17:57784869..57784883,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:57784869..57784883,+ to FFCP PHASE1:Hg19::chr17:57784869..57784883,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81671 | |EntrezGene=81671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29559 | |HGNC=29559 | ||
|TSSclassifier=strong | |||
|UniProt=Q96GC9 | |UniProt=Q96GC9 | ||
|association_with_transcript=6bp_to_ENST00000262291,NM_030938,uc002ixu.3,uc010wog.1,uc010woh.1,uc010woi.1,uc010woj.1_5end | |||
|cluster_id=chr17:57784869..57784883,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_VMP1_5end | |||
|id=chr17:57784869..57784883,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.72e-33!140;CL:0002087!6.07e-29!119;CL:0002031!1.65e-27!124;CL:0000037!4.70e-25!172;CL:0000566!4.70e-25!172;CL:0002032!2.52e-24!165;CL:0000837!2.52e-24!165;CL:0000988!7.58e-22!182;CL:0000542!1.32e-19!53;CL:0000051!1.32e-19!53;CL:0000838!1.35e-19!52;CL:0002057!1.20e-15!42;CL:0000766!3.73e-15!76;CL:0000860!2.39e-14!45;CL:0000791!2.07e-12!18;CL:0000789!2.07e-12!18;CL:0002420!2.07e-12!18;CL:0002419!2.07e-12!18;CL:0000790!2.07e-12!18;CL:0000084!3.40e-11!25;CL:0000827!3.40e-11!25;CL:0000839!8.41e-11!70;CL:0000557!2.28e-10!71;CL:0002194!2.51e-09!63;CL:0000576!2.51e-09!63;CL:0000040!2.51e-09!63;CL:0000559!2.51e-09!63;CL:0000625!2.45e-08!11;CL:0002009!2.59e-08!65;CL:0000763!2.65e-08!112;CL:0000049!2.65e-08!112;CL:0000236!2.68e-08!14;CL:0000945!3.81e-08!24;CL:0000826!3.81e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.71e-19;18!CL:0000789;4.71e-19;18!CL:0002419;4.71e-19;18!CL:0000084;1.14e-15;25!CL:0000542;5.05e-15;53!CL:0000860;7.36e-15;33!CL:0002057;7.36e-15;33!CL:0002087;8.76e-13;104!CL:0000625;1.73e-12;11!CL:0000576;2.69e-12;48!CL:0000236;4.72e-12;13!CL:0000766;1.02e-11;69!CL:0000473;6.21e-10;39!CL:0000234;6.21e-10;39!CL:0000094;6.76e-10;8!CL:0000738;8.45e-10;136!CL:0000945;4.33e-08;24!CL:0000624;1.91e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.72e-45,136;CL:0002031,2.02e-39,120;CL:0002087,3.88e-39,115;CL:0000037,8.23e-34,168;CL:0002032,1.95e-32,161;CL:0000837,1.95e-32,161;CL:0000988,2.52e-30,177;CL:0000838,3.49e-24,52;CL:0000860,4.14e-24,42;CL:0002057,4.14e-24,42;CL:0000542,2.00e-23,53;CL:0000051,2.00e-23,53;CL:0000766,2.98e-23,72;CL:0000473,2.35e-19,48;CL:0000234,2.35e-19,48;CL:0000791,5.37e-19,18;CL:0000789,5.37e-19,18;CL:0002420,5.37e-19,18;CL:0002419,5.37e-19,18;CL:0000790,5.37e-19,18;CL:0000839,1.33e-16,66;CL:0000557,2.54e-16,67;CL:0000084,3.06e-15,25;CL:0000827,3.06e-15,25;CL:0002194,9.01e-14,59;CL:0000576,9.01e-14,59;CL:0000040,9.01e-14,59;CL:0000559,9.01e-14,59;CL:0002009,6.40e-13,61;CL:0000625,1.88e-12,11;CL:0000236,2.17e-12,14;CL:0000763,8.00e-12,108;CL:0000049,8.00e-12,108;CL:0000094,8.00e-10,8;CL:0002393,2.23e-08,9;CL:0002397,2.23e-08,9;CL:0000945,3.40e-08,24;CL:0000826,3.40e-08,24;CL:0000624,2.03e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;4.71e-19;18!CL:0002057;4.86e-17;42!CL:0000051;5.05e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.00e-19!115;UBERON:0002193!1.91e-18!112;UBERON:0002390!1.16e-17!102;UBERON:0003061!1.16e-17!102;UBERON:0002371!2.26e-09!80;UBERON:0001474!5.72e-09!86;UBERON:0000178!1.81e-08!15;UBERON:0000179!1.81e-08!15;UBERON:0000463!1.81e-08!15;UBERON:0002405!3.71e-08!115;UBERON:0004765!2.78e-07!101;UBERON:0001434!2.78e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.90e-10;15!UBERON:0000179;5.90e-10;15!UBERON:0000463;5.90e-10;15!UBERON:0002390;3.46e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.60e-26,108;UBERON:0002390,5.05e-25,98;UBERON:0003061,5.05e-25,98;UBERON:0002405,1.54e-18,93;UBERON:0002371,4.10e-14,76;UBERON:0001474,1.06e-12,82;UBERON:0004765,7.18e-11,90;UBERON:0000178,6.47e-10,15;UBERON:0000179,6.47e-10,15;UBERON:0000463,6.47e-10,15;UBERON:0007023,7.58e-10,114;UBERON:0001434,4.49e-09,100 | |||
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| ||
|short_description=p2@VMP1 | |||
}} | }} |
Latest revision as of 13:04, 16 September 2015
Short description: | p2@VMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VMP1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 6bp_to_ENST00000262291, NM_030938, uc002ixu.3, uc010wog.1, uc010woh.1, uc010woi.1, uc010woj.1_5end |
EntrezGene: | VMP1 |
HGNC: | 29559 |
UniProt: | Q96GC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.60e-26 | 108 |
hematopoietic system | 5.05e-25 | 98 |
blood island | 5.05e-25 | 98 |
immune system | 1.54e-18 | 93 |
bone marrow | 4.10e-14 | 76 |
bone element | 1.06e-12 | 82 |
skeletal element | 7.18e-11 | 90 |
blood | 6.47e-10 | 15 |
haemolymphatic fluid | 6.47e-10 | 15 |
organism substance | 6.47e-10 | 15 |
adult organism | 7.58e-10 | 114 |
skeletal system | 4.49e-09 | 100 |