FFCP PHASE1:Hg19::chr1:12251915..12251946,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7133 | |EntrezGene=7133 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11917 | |HGNC=11917 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000489921_5end | |association_with_transcript=20bp_to_ENST00000489921_5end | ||
|cluster_id=chr1:12251915..12251946,+ | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_3_at_TNFRSF1B_5end | |description=CAGE_peak_3_at_TNFRSF1B_5end | ||
|id=chr1:12251915..12251946,+ | |id=chr1:12251915..12251946,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.26e-39!140;CL:0000037!3.78e-38!172;CL:0000566!3.78e-38!172;CL:0000766!6.17e-38!76;CL:0002032!6.39e-38!165;CL:0000837!6.39e-38!165;CL:0002057!1.44e-37!42;CL:0000988!4.51e-37!182;CL:0000763!2.22e-36!112;CL:0000049!2.22e-36!112;CL:0002194!2.09e-35!63;CL:0000576!2.09e-35!63;CL:0000040!2.09e-35!63;CL:0000559!2.09e-35!63;CL:0002009!3.57e-35!65;CL:0002087!5.51e-35!119;CL:0000839!7.07e-34!70;CL:0000860!1.06e-33!45;CL:0002031!3.96e-33!124;CL:0000557!3.16e-32!71;CL:0000134!1.20e-10!358;CL:0002320!1.54e-10!365;CL:0000219!1.79e-07!390;CL:0000048!4.46e-07!430;CL:0002393!7.14e-07!9;CL:0002397!7.14e-07!9;CL:0000723!9.04e-07!436 | |ontology_enrichment_celltype=CL:0000738!4.26e-39!140;CL:0000037!3.78e-38!172;CL:0000566!3.78e-38!172;CL:0000766!6.17e-38!76;CL:0002032!6.39e-38!165;CL:0000837!6.39e-38!165;CL:0002057!1.44e-37!42;CL:0000988!4.51e-37!182;CL:0000763!2.22e-36!112;CL:0000049!2.22e-36!112;CL:0002194!2.09e-35!63;CL:0000576!2.09e-35!63;CL:0000040!2.09e-35!63;CL:0000559!2.09e-35!63;CL:0002009!3.57e-35!65;CL:0002087!5.51e-35!119;CL:0000839!7.07e-34!70;CL:0000860!1.06e-33!45;CL:0002031!3.96e-33!124;CL:0000557!3.16e-32!71;CL:0000134!1.20e-10!358;CL:0002320!1.54e-10!365;CL:0000219!1.79e-07!390;CL:0000048!4.46e-07!430;CL:0002393!7.14e-07!9;CL:0002397!7.14e-07!9;CL:0000723!9.04e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.69e-66;33!CL:0002057;1.69e-66;33!CL:0000473;1.60e-61;39!CL:0000234;1.60e-61;39!CL:0000576;2.08e-47;48!CL:0000766;9.59e-40;69!CL:0000763;9.61e-18;100!CL:0002087;5.49e-15;104!CL:0000738;4.30e-14;136!CL:0000094;2.97e-12;8!CL:0002393;3.37e-09;6!CL:0002397;3.37e-09;6!CL:0000235;4.43e-09;6!CL:0000081;1.32e-08;11!CL:0000988;1.67e-08;177!CL:0000775;1.23e-07;3!CL:0000875;4.22e-07;3!CL:0002396;4.22e-07;3!CL:0000226;6.59e-07;3!CL:0000842;6.59e-07;3!CL:0000219;7.24e-07;193!CL:0000453;9.72e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.67e-94,48;CL:0000234,3.67e-94,48;CL:0000860,1.66e-86,42;CL:0002057,1.66e-86,42;CL:0000766,2.56e-80,72;CL:0002009,9.75e-76,61;CL:0002194,1.37e-75,59;CL:0000576,1.37e-75,59;CL:0000040,1.37e-75,59;CL:0000559,1.37e-75,59;CL:0000557,9.55e-68,67;CL:0000839,3.62e-66,66;CL:0000763,4.26e-59,108;CL:0000049,4.26e-59,108;CL:0000738,4.77e-56,136;CL:0002087,1.01e-45,115;CL:0000037,1.27e-43,168;CL:0000988,5.92e-42,177;CL:0002032,2.47e-41,161;CL:0000837,2.47e-41,161;CL:0002031,1.95e-39,120;CL:0002393,1.26e-14,9;CL:0002397,1.26e-14,9;CL:0002320,3.16e-14,361;CL:0000134,3.53e-14,354;CL:0000094,2.51e-12,8;CL:0000219,2.08e-11,386;CL:0000048,2.53e-09,427;CL:0000235,4.77e-09,6;CL:0000723,5.85e-09,433;CL:0000081,1.17e-08,11;CL:0000034,1.72e-08,441;CL:0000775,1.10e-07,3;CL:0000875,3.41e-07,3;CL:0002396,3.41e-07,3;CL:0000226,5.58e-07,3;CL:0000842,5.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.19e-62;42!CL:0000049;4.55e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.45e-40!112;UBERON:0002390!2.16e-39!102;UBERON:0003061!2.16e-39!102;UBERON:0002371!1.34e-29!80;UBERON:0001474!8.47e-26!86;UBERON:0002405!2.17e-25!115;UBERON:0004765!8.93e-20!101;UBERON:0001434!8.93e-20!101;UBERON:0003081!2.19e-15!216;UBERON:0002204!2.25e-10!167;UBERON:0002384!5.96e-10!375;UBERON:0000178!1.64e-08!15;UBERON:0000179!1.64e-08!15;UBERON:0000463!1.64e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.50e-14;15!UBERON:0000179;1.50e-14;15!UBERON:0000463;1.50e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.39e-69,98;UBERON:0003061,3.39e-69,98;UBERON:0002193,1.48e-63,108;UBERON:0002371,1.19e-60,76;UBERON:0001474,3.45e-55,82;UBERON:0002405,3.94e-49,93;UBERON:0004765,4.94e-49,90;UBERON:0001434,1.02e-42,100;UBERON:0003081,1.64e-30,203;UBERON:0002204,4.42e-22,167;UBERON:0000178,7.43e-15,15;UBERON:0000179,7.43e-15,15;UBERON:0000463,7.43e-15,15;UBERON:0000926,2.46e-14,315;UBERON:0004120,2.46e-14,315;UBERON:0006603,2.46e-14,315;UBERON:0002384,2.30e-13,371 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0.687720651731561,0.410502947249729,0.236132343941038,1.96682138424452,1.15148819429164,2.01260960310899,0,0,0,0,0,0,0,2.60707781711184,2.17010870715852,0.895661896959697,1.29557466407592,0.257575567634187,10.3232749533491,11.3362783106643,6.79235371325885,14.8754583619638,9.86802931252382,13.6270803193846,9.78154133895312,8.19714260893122,6.62150243688039,11.3766074643084,7.74581620300591,9.47985406160392,22.2125960660274,18.0118059038178,8.98893937780339,17.7528657575123,12.1953030288916,16.6227652707751,7.25672860410775,8.17800996248691,8.52449501065388,20.0244374653723,11.9150897185139,13.7020894779026,12.5624332628372,8.34372669472322,6.73285418585862,20.5835830895345,6.2607198117886,6.0127853613768,6.97142444829408,8.2915676986367,2.30624510059213,4.04383072127382,3.45406853535464,3.53596290733576,1.71007646244749,6.36533367037088,3.47061892152804,0,0,0.889509253863555,0,0,1.14950487990897,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0.786839080455332,0.393010762749165,0.822405995998037,4.84840836632966,0,0.946895611469467,3.89653456815823,7.24167969753628,0.883817722424512,1.77227115666897,1.89562704635511,7.68547918354051,7.54344215847294,1.31550323682941,0.829050053357545,0.579606171470105,0.444859689486181,0,0,0.566546713487831,0,1.03088233644789,1.51811815211702,0.318565414324097,0,0,1.05402583354441,0.76791966692651,0,0.710331756132051,0,0.403213486449465,0.802320587350522,0.579297615531196,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0.665188192387692,0.087834785693126,0.261958150995425,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.732186172644509,0.367663080345869,0,0.17859945656816,0,0.112611480483322,1.53316637465883,0,0.549605231791222,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,1.36221684880438,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0,0,0,0.247266929278557,1.82032272387605,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.570762456703795,0,0,0.984868024349589,2.10603838625314,1.33768046059855,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0.672786506072164,0,0.2933531432838,0,0,0,0.26593811658487,1.04007436911366,0,1.41849132023278,0.799266537048298,0.428933980974443,0.542621605391443,0,0,0,0,0,0,0,6.08118903205952,2.51128545716063,10.5416969741516,0,0,0,0,0.205476322550383,0,0.336255431980582,0.591092280605782,1.07813787429759,1.02674429023799,0,0,0,0,0,2.99602809578873,14.9580729602012,4.14415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17480694477644,0.343143423810856,2.06768026122887,3.45142721309787,1.921096040462,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,3.04468565539302,0.764637207142375,2.84823593587081,1.66762242820452,1.64544909234478,1.94541993357815,1.62009431171434,4.75875105776562,0,0,0.490080431962063,0,0,0,0,0,0.191505370132367,0,0.324621940274555,0.280797178113459,0.228234679033192,0,2.50634477090067,0.50787533340481,0.481764225311099,0.80719882876419,0,0.687010689511529,0,0.671028323677248,0.166849141711909,0.390776190804081,0,0,0,0,0,0.18714054040822,0.879049075631364,0,0.334330152832435,0.568272293612826,0,0,0,0.994147647766298,0,0,0,0,0,0.828851746593443,0,0,0.246169610922139,0,0,0,0,0.295930216910801,4.7896618469388,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0.31396051279005,0,0.225595660617181,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0,0,0,0.858452096273142,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0.160753148465019,0,0,1.1248694577575,0,0.0607495566580247,0,0.315222829196793,0.104909176269996,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0,0,0,0.640724475406168,0.471612915298998,0.828478110694391,0.496166021811951,0.592834895693833,0,0,0,0.2506898940227,0,0,0,0,0,0.125190930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| ||
|short_description=p3@TNFRSF1B | |short_description=p3@TNFRSF1B | ||
}} | }} |
Latest revision as of 13:53, 16 September 2015
Short description: | p3@TNFRSF1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TNFRSF1B_5end |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | 20bp_to_ENST00000489921_5end |
EntrezGene: | TNFRSF1B |
HGNC: | 11917 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.39e-69 | 98 |
blood island | 3.39e-69 | 98 |
hemolymphoid system | 1.48e-63 | 108 |
bone marrow | 1.19e-60 | 76 |
bone element | 3.45e-55 | 82 |
immune system | 3.94e-49 | 93 |
skeletal element | 4.94e-49 | 90 |
skeletal system | 1.02e-42 | 100 |
lateral plate mesoderm | 1.64e-30 | 203 |
musculoskeletal system | 4.42e-22 | 167 |
blood | 7.43e-15 | 15 |
haemolymphatic fluid | 7.43e-15 | 15 |
organism substance | 7.43e-15 | 15 |
mesoderm | 2.46e-14 | 315 |
mesoderm-derived structure | 2.46e-14 | 315 |
presumptive mesoderm | 2.46e-14 | 315 |
connective tissue | 2.30e-13 | 371 |