FFCP PHASE1:Hg19::chr1:12251915..12251946,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7133 | |EntrezGene=7133 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11917 | |HGNC=11917 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000489921_5end | |association_with_transcript=20bp_to_ENST00000489921_5end | ||
|cluster_id=chr1:12251915..12251946,+ | |||
|coexpression_cluster_id=C329 | |coexpression_cluster_id=C329 | ||
|description=CAGE_peak_3_at_TNFRSF1B_5end | |description=CAGE_peak_3_at_TNFRSF1B_5end | ||
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|ontology_enrichment_celltype=CL:0000738!4.26e-39!140;CL:0000037!3.78e-38!172;CL:0000566!3.78e-38!172;CL:0000766!6.17e-38!76;CL:0002032!6.39e-38!165;CL:0000837!6.39e-38!165;CL:0002057!1.44e-37!42;CL:0000988!4.51e-37!182;CL:0000763!2.22e-36!112;CL:0000049!2.22e-36!112;CL:0002194!2.09e-35!63;CL:0000576!2.09e-35!63;CL:0000040!2.09e-35!63;CL:0000559!2.09e-35!63;CL:0002009!3.57e-35!65;CL:0002087!5.51e-35!119;CL:0000839!7.07e-34!70;CL:0000860!1.06e-33!45;CL:0002031!3.96e-33!124;CL:0000557!3.16e-32!71;CL:0000134!1.20e-10!358;CL:0002320!1.54e-10!365;CL:0000219!1.79e-07!390;CL:0000048!4.46e-07!430;CL:0002393!7.14e-07!9;CL:0002397!7.14e-07!9;CL:0000723!9.04e-07!436 | |ontology_enrichment_celltype=CL:0000738!4.26e-39!140;CL:0000037!3.78e-38!172;CL:0000566!3.78e-38!172;CL:0000766!6.17e-38!76;CL:0002032!6.39e-38!165;CL:0000837!6.39e-38!165;CL:0002057!1.44e-37!42;CL:0000988!4.51e-37!182;CL:0000763!2.22e-36!112;CL:0000049!2.22e-36!112;CL:0002194!2.09e-35!63;CL:0000576!2.09e-35!63;CL:0000040!2.09e-35!63;CL:0000559!2.09e-35!63;CL:0002009!3.57e-35!65;CL:0002087!5.51e-35!119;CL:0000839!7.07e-34!70;CL:0000860!1.06e-33!45;CL:0002031!3.96e-33!124;CL:0000557!3.16e-32!71;CL:0000134!1.20e-10!358;CL:0002320!1.54e-10!365;CL:0000219!1.79e-07!390;CL:0000048!4.46e-07!430;CL:0002393!7.14e-07!9;CL:0002397!7.14e-07!9;CL:0000723!9.04e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.69e-66;33!CL:0002057;1.69e-66;33!CL:0000473;1.60e-61;39!CL:0000234;1.60e-61;39!CL:0000576;2.08e-47;48!CL:0000766;9.59e-40;69!CL:0000763;9.61e-18;100!CL:0002087;5.49e-15;104!CL:0000738;4.30e-14;136!CL:0000094;2.97e-12;8!CL:0002393;3.37e-09;6!CL:0002397;3.37e-09;6!CL:0000235;4.43e-09;6!CL:0000081;1.32e-08;11!CL:0000988;1.67e-08;177!CL:0000775;1.23e-07;3!CL:0000875;4.22e-07;3!CL:0002396;4.22e-07;3!CL:0000226;6.59e-07;3!CL:0000842;6.59e-07;3!CL:0000219;7.24e-07;193!CL:0000453;9.72e-07;5 | |ontology_enrichment_celltype_v019=CL:0000860;1.69e-66;33!CL:0002057;1.69e-66;33!CL:0000473;1.60e-61;39!CL:0000234;1.60e-61;39!CL:0000576;2.08e-47;48!CL:0000766;9.59e-40;69!CL:0000763;9.61e-18;100!CL:0002087;5.49e-15;104!CL:0000738;4.30e-14;136!CL:0000094;2.97e-12;8!CL:0002393;3.37e-09;6!CL:0002397;3.37e-09;6!CL:0000235;4.43e-09;6!CL:0000081;1.32e-08;11!CL:0000988;1.67e-08;177!CL:0000775;1.23e-07;3!CL:0000875;4.22e-07;3!CL:0002396;4.22e-07;3!CL:0000226;6.59e-07;3!CL:0000842;6.59e-07;3!CL:0000219;7.24e-07;193!CL:0000453;9.72e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.67e-94,48;CL:0000234,3.67e-94,48;CL:0000860,1.66e-86,42;CL:0002057,1.66e-86,42;CL:0000766,2.56e-80,72;CL:0002009,9.75e-76,61;CL:0002194,1.37e-75,59;CL:0000576,1.37e-75,59;CL:0000040,1.37e-75,59;CL:0000559,1.37e-75,59;CL:0000557,9.55e-68,67;CL:0000839,3.62e-66,66;CL:0000763,4.26e-59,108;CL:0000049,4.26e-59,108;CL:0000738,4.77e-56,136;CL:0002087,1.01e-45,115;CL:0000037,1.27e-43,168;CL:0000988,5.92e-42,177;CL:0002032,2.47e-41,161;CL:0000837,2.47e-41,161;CL:0002031,1.95e-39,120;CL:0002393,1.26e-14,9;CL:0002397,1.26e-14,9;CL:0002320,3.16e-14,361;CL:0000134,3.53e-14,354;CL:0000094,2.51e-12,8;CL:0000219,2.08e-11,386;CL:0000048,2.53e-09,427;CL:0000235,4.77e-09,6;CL:0000723,5.85e-09,433;CL:0000081,1.17e-08,11;CL:0000034,1.72e-08,441;CL:0000775,1.10e-07,3;CL:0000875,3.41e-07,3;CL:0002396,3.41e-07,3;CL:0000226,5.58e-07,3;CL:0000842,5.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.19e-62;42!CL:0000049;4.55e-19;108 | |ontology_enrichment_development_v019=CL:0002057;4.19e-62;42!CL:0000049;4.55e-19;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.45e-40!112;UBERON:0002390!2.16e-39!102;UBERON:0003061!2.16e-39!102;UBERON:0002371!1.34e-29!80;UBERON:0001474!8.47e-26!86;UBERON:0002405!2.17e-25!115;UBERON:0004765!8.93e-20!101;UBERON:0001434!8.93e-20!101;UBERON:0003081!2.19e-15!216;UBERON:0002204!2.25e-10!167;UBERON:0002384!5.96e-10!375;UBERON:0000178!1.64e-08!15;UBERON:0000179!1.64e-08!15;UBERON:0000463!1.64e-08!15 | |ontology_enrichment_uberon=UBERON:0002193!8.45e-40!112;UBERON:0002390!2.16e-39!102;UBERON:0003061!2.16e-39!102;UBERON:0002371!1.34e-29!80;UBERON:0001474!8.47e-26!86;UBERON:0002405!2.17e-25!115;UBERON:0004765!8.93e-20!101;UBERON:0001434!8.93e-20!101;UBERON:0003081!2.19e-15!216;UBERON:0002204!2.25e-10!167;UBERON:0002384!5.96e-10!375;UBERON:0000178!1.64e-08!15;UBERON:0000179!1.64e-08!15;UBERON:0000463!1.64e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.50e-14;15!UBERON:0000179;1.50e-14;15!UBERON:0000463;1.50e-14;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.50e-14;15!UBERON:0000179;1.50e-14;15!UBERON:0000463;1.50e-14;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.39e-69,98;UBERON:0003061,3.39e-69,98;UBERON:0002193,1.48e-63,108;UBERON:0002371,1.19e-60,76;UBERON:0001474,3.45e-55,82;UBERON:0002405,3.94e-49,93;UBERON:0004765,4.94e-49,90;UBERON:0001434,1.02e-42,100;UBERON:0003081,1.64e-30,203;UBERON:0002204,4.42e-22,167;UBERON:0000178,7.43e-15,15;UBERON:0000179,7.43e-15,15;UBERON:0000463,7.43e-15,15;UBERON:0000926,2.46e-14,315;UBERON:0004120,2.46e-14,315;UBERON:0006603,2.46e-14,315;UBERON:0002384,2.30e-13,371 | |||
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| ||
|short_description=p3@TNFRSF1B | |short_description=p3@TNFRSF1B | ||
}} | }} |
Latest revision as of 13:53, 16 September 2015
Short description: | p3@TNFRSF1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TNFRSF1B_5end |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | 20bp_to_ENST00000489921_5end |
EntrezGene: | TNFRSF1B |
HGNC: | 11917 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.39e-69 | 98 |
blood island | 3.39e-69 | 98 |
hemolymphoid system | 1.48e-63 | 108 |
bone marrow | 1.19e-60 | 76 |
bone element | 3.45e-55 | 82 |
immune system | 3.94e-49 | 93 |
skeletal element | 4.94e-49 | 90 |
skeletal system | 1.02e-42 | 100 |
lateral plate mesoderm | 1.64e-30 | 203 |
musculoskeletal system | 4.42e-22 | 167 |
blood | 7.43e-15 | 15 |
haemolymphatic fluid | 7.43e-15 | 15 |
organism substance | 7.43e-15 | 15 |
mesoderm | 2.46e-14 | 315 |
mesoderm-derived structure | 2.46e-14 | 315 |
presumptive mesoderm | 2.46e-14 | 315 |
connective tissue | 2.30e-13 | 371 |