FFCP PHASE1:Hg19::chr2:118572350..118572364,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8886 | |EntrezGene=8886 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2741 | |HGNC=2741 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N254,Q9NVP1 | |UniProt=Q8N254,Q9NVP1 | ||
|association_with_transcript=95bp_to_NM_006773,uc002tlh.1_5end | |association_with_transcript=95bp_to_NM_006773,uc002tlh.1_5end | ||
|cluster_id=chr2:118572350..118572364,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_DDX18_5end | |description=CAGE_peak_3_at_DDX18_5end | ||
|id=chr2:118572350..118572364,+ | |id=chr2:118572350..118572364,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.74e-27!140;CL:0000037!1.06e-23!172;CL:0000566!1.06e-23!172;CL:0002057!6.87e-23!42;CL:0000988!7.02e-23!182;CL:0002032!1.05e-21!165;CL:0000837!1.05e-21!165;CL:0002087!4.57e-21!119;CL:0002031!5.00e-21!124;CL:0000860!1.45e-20!45;CL:0000766!1.59e-16!76;CL:0000557!1.06e-13!71;CL:0000763!2.43e-13!112;CL:0000049!2.43e-13!112;CL:0000839!8.73e-13!70;CL:0002009!1.24e-12!65;CL:0002194!7.13e-12!63;CL:0000576!7.13e-12!63;CL:0000040!7.13e-12!63;CL:0000559!7.13e-12!63;CL:0000542!2.31e-08!53;CL:0000051!2.31e-08!53;CL:0000838!5.89e-08!52 | |ontology_enrichment_celltype=CL:0000738!5.74e-27!140;CL:0000037!1.06e-23!172;CL:0000566!1.06e-23!172;CL:0002057!6.87e-23!42;CL:0000988!7.02e-23!182;CL:0002032!1.05e-21!165;CL:0000837!1.05e-21!165;CL:0002087!4.57e-21!119;CL:0002031!5.00e-21!124;CL:0000860!1.45e-20!45;CL:0000766!1.59e-16!76;CL:0000557!1.06e-13!71;CL:0000763!2.43e-13!112;CL:0000049!2.43e-13!112;CL:0000839!8.73e-13!70;CL:0002009!1.24e-12!65;CL:0002194!7.13e-12!63;CL:0000576!7.13e-12!63;CL:0000040!7.13e-12!63;CL:0000559!7.13e-12!63;CL:0000542!2.31e-08!53;CL:0000051!2.31e-08!53;CL:0000838!5.89e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.35e-43;33!CL:0002057;2.35e-43;33!CL:0000473;1.35e-32;39!CL:0000234;1.35e-32;39!CL:0000576;3.52e-22;48!CL:0000766;2.46e-21;69!CL:0002087;3.44e-14;104!CL:0000738;2.02e-11;136!CL:0000624;1.04e-10;6!CL:0000094;1.16e-10;8!CL:0000081;1.19e-09;11!CL:0000763;1.98e-09;100!CL:0000988;2.05e-08;177!CL:0000084;3.22e-08;25!CL:0000542;5.73e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.97e-55,136;CL:0000988,1.66e-45,177;CL:0000037,1.86e-44,168;CL:0002087,8.70e-44,115;CL:0002031,5.65e-43,120;CL:0000766,2.41e-42,72;CL:0000860,6.41e-42,42;CL:0002057,6.41e-42,42;CL:0002032,2.43e-40,161;CL:0000837,2.43e-40,161;CL:0000473,5.78e-40,48;CL:0000234,5.78e-40,48;CL:0000557,1.74e-33,67;CL:0000839,3.13e-32,66;CL:0002009,4.83e-30,61;CL:0002194,1.72e-29,59;CL:0000576,1.72e-29,59;CL:0000040,1.72e-29,59;CL:0000559,1.72e-29,59;CL:0000763,4.62e-27,108;CL:0000049,4.62e-27,108;CL:0000134,2.49e-14,354;CL:0002320,1.31e-13,361;CL:0000542,6.98e-12,53;CL:0000051,6.98e-12,53;CL:0000219,4.19e-11,386;CL:0000838,4.81e-11,52;CL:0000624,8.59e-11,6;CL:0000094,1.21e-10,8;CL:0000081,1.19e-09,11;CL:0000048,1.43e-09,427;CL:0000723,3.91e-09,433;CL:0000034,4.83e-09,441;CL:0000084,3.15e-08,25;CL:0000827,3.15e-08,25 | |||
|ontology_enrichment_development_v019=CL:0002057;4.66e-31;42!CL:0000051;5.73e-08;53!CL:0000049;1.30e-07;108 | |||
|ontology_enrichment_disease=DOID:162!1.89e-08!235;DOID:14566!6.64e-08!239 | |ontology_enrichment_disease=DOID:162!1.89e-08!235;DOID:14566!6.64e-08!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.15e-11!80;UBERON:0002390!1.50e-10!102;UBERON:0003061!1.50e-10!102;UBERON:0001474!1.76e-10!86;UBERON:0004765!9.06e-09!101;UBERON:0001434!9.06e-09!101;UBERON:0002193!1.07e-08!112;UBERON:0002405!4.34e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.37e-29,98;UBERON:0003061,1.37e-29,98;UBERON:0002371,2.05e-29,76;UBERON:0001474,2.72e-26,82;UBERON:0002193,1.96e-25,108;UBERON:0002405,5.02e-23,93;UBERON:0004765,8.61e-23,90;UBERON:0001434,3.15e-19,100;UBERON:0002384,1.24e-12,371;UBERON:0003081,2.07e-09,203;UBERON:0002204,4.72e-08,167 | |||
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|short_description=p3@DDX18 | |short_description=p3@DDX18 | ||
}} | }} |
Latest revision as of 15:39, 16 September 2015
Short description: | p3@DDX18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DDX18_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 95bp_to_NM_006773, uc002tlh.1_5end |
EntrezGene: | DDX18 |
HGNC: | 2741 |
UniProt: | Q8N254Q9NVP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.37e-29 | 98 |
blood island | 1.37e-29 | 98 |
bone marrow | 2.05e-29 | 76 |
bone element | 2.72e-26 | 82 |
hemolymphoid system | 1.96e-25 | 108 |
immune system | 5.02e-23 | 93 |
skeletal element | 8.61e-23 | 90 |
skeletal system | 3.15e-19 | 100 |
connective tissue | 1.24e-12 | 371 |
lateral plate mesoderm | 2.07e-09 | 203 |
musculoskeletal system | 4.72e-08 | 167 |