FFCP PHASE1:Hg19::chr12:120687798..120687841,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5829 | |EntrezGene=5829 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9718 | |HGNC=9718 | ||
|TSSclassifier=strong | |||
|UniProt=P49023 | |UniProt=P49023 | ||
|association_with_transcript=115bp_to_uc001txx.2_5end | |association_with_transcript=115bp_to_uc001txx.2_5end | ||
|cluster_id=chr12:120687798..120687841,- | |||
|coexpression_cluster_id=C3244 | |coexpression_cluster_id=C3244 | ||
|description=CAGE_peak_11_at_PXN_5end | |description=CAGE_peak_11_at_PXN_5end | ||
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|ontology_enrichment_celltype=CL:0002139!1.24e-14!24;CL:0000115!6.15e-14!35;CL:0000071!2.37e-10!18;CL:0002546!2.37e-10!18;CL:0002078!4.71e-10!44;CL:0000213!3.52e-09!57;CL:0000215!3.52e-09!57 | |ontology_enrichment_celltype=CL:0002139!1.24e-14!24;CL:0000115!6.15e-14!35;CL:0000071!2.37e-10!18;CL:0002546!2.37e-10!18;CL:0002078!4.71e-10!44;CL:0000213!3.52e-09!57;CL:0000215!3.52e-09!57 | ||
|ontology_enrichment_celltype_v019=CL:0000115;9.66e-16;36!CL:0002139;1.39e-14;24!CL:0000071;7.94e-11;18!CL:0002078;6.26e-09;45!CL:0000213;1.20e-07;58!CL:0000215;1.20e-07;58!CL:0002188;6.49e-07;5!CL:0002577;8.34e-07;3 | |ontology_enrichment_celltype_v019=CL:0000115;9.66e-16;36!CL:0002139;1.39e-14;24!CL:0000071;7.94e-11;18!CL:0002078;6.26e-09;45!CL:0000213;1.20e-07;58!CL:0000215;1.20e-07;58!CL:0002188;6.49e-07;5!CL:0002577;8.34e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.67e-18,36;CL:0002078,6.18e-15,45;CL:0002139,1.01e-14,24;CL:0000071,5.93e-11,18;CL:0002546,5.93e-11,18;CL:0000213,4.17e-10,58;CL:0000215,4.17e-10,58;CL:0002188,6.65e-07,5;CL:0002577,8.26e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;7.94e-11;18 | |ontology_enrichment_development_v019=CL:0002546;7.94e-11;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.55e-39!115;UBERON:0004111!8.22e-16!241;UBERON:0001049!6.91e-13!57;UBERON:0005068!6.91e-13!57;UBERON:0006241!6.91e-13!57;UBERON:0007135!6.91e-13!57;UBERON:0000025!7.88e-13!194;UBERON:0000477!6.39e-12!286;UBERON:0003075!1.14e-10!86;UBERON:0007284!1.14e-10!86;UBERON:0003080!2.22e-10!42;UBERON:0001986!2.37e-10!18;UBERON:0004638!2.37e-10!18;UBERON:0004852!2.37e-10!18;UBERON:0002780!1.01e-09!41;UBERON:0001890!1.01e-09!41;UBERON:0006240!1.01e-09!41;UBERON:0002616!1.29e-09!59;UBERON:0002346!1.55e-09!90;UBERON:0000955!4.10e-09!69;UBERON:0006238!4.10e-09!69;UBERON:0000487!1.92e-08!22;UBERON:0001017!3.62e-08!82;UBERON:0000064!3.70e-08!219;UBERON:0002020!6.25e-08!34;UBERON:0003528!6.25e-08!34;UBERON:0000483!7.20e-08!309;UBERON:0005743!7.36e-08!86;UBERON:0000119!8.96e-08!312;UBERON:0001893!1.79e-07!34;UBERON:0002791!3.76e-07!33;UBERON:0002308!7.24e-07!9;UBERON:0000125!7.24e-07!9;UBERON:0003124!7.97e-07!7;UBERON:0006914!9.31e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!1.55e-39!115;UBERON:0004111!8.22e-16!241;UBERON:0001049!6.91e-13!57;UBERON:0005068!6.91e-13!57;UBERON:0006241!6.91e-13!57;UBERON:0007135!6.91e-13!57;UBERON:0000025!7.88e-13!194;UBERON:0000477!6.39e-12!286;UBERON:0003075!1.14e-10!86;UBERON:0007284!1.14e-10!86;UBERON:0003080!2.22e-10!42;UBERON:0001986!2.37e-10!18;UBERON:0004638!2.37e-10!18;UBERON:0004852!2.37e-10!18;UBERON:0002780!1.01e-09!41;UBERON:0001890!1.01e-09!41;UBERON:0006240!1.01e-09!41;UBERON:0002616!1.29e-09!59;UBERON:0002346!1.55e-09!90;UBERON:0000955!4.10e-09!69;UBERON:0006238!4.10e-09!69;UBERON:0000487!1.92e-08!22;UBERON:0001017!3.62e-08!82;UBERON:0000064!3.70e-08!219;UBERON:0002020!6.25e-08!34;UBERON:0003528!6.25e-08!34;UBERON:0000483!7.20e-08!309;UBERON:0005743!7.36e-08!86;UBERON:0000119!8.96e-08!312;UBERON:0001893!1.79e-07!34;UBERON:0002791!3.76e-07!33;UBERON:0002308!7.24e-07!9;UBERON:0000125!7.24e-07!9;UBERON:0003124!7.97e-07!7;UBERON:0006914!9.31e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.94e-11;18!UBERON:0001986;7.94e-11;18!UBERON:0004852;7.94e-11;18!UBERON:0007023;2.77e-09;114!UBERON:0001987;1.98e-08;4!UBERON:0000487;2.48e-08;22!UBERON:0006914;5.30e-07;25!UBERON:0007100;7.00e-07;25!UBERON:0004151;8.03e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004638;7.94e-11;18!UBERON:0001986;7.94e-11;18!UBERON:0004852;7.94e-11;18!UBERON:0007023;2.77e-09;114!UBERON:0001987;1.98e-08;4!UBERON:0000487;2.48e-08;22!UBERON:0006914;5.30e-07;25!UBERON:0007100;7.00e-07;25!UBERON:0004151;8.03e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-34,114;UBERON:0004111,4.74e-12,240;UBERON:0004638,5.93e-11,18;UBERON:0001986,5.93e-11,18;UBERON:0004852,5.93e-11,18;UBERON:0000025,1.27e-10,192;UBERON:0004872,7.16e-10,83;UBERON:0003124,1.26e-09,7;UBERON:0003103,1.83e-09,68;UBERON:0000055,2.92e-09,68;UBERON:0001987,1.76e-08,4;UBERON:0004340,1.76e-08,4;UBERON:0000487,1.97e-08,22;UBERON:0001009,4.48e-08,112;UBERON:0005631,2.11e-07,14;UBERON:0000158,2.11e-07,14;UBERON:0002049,2.97e-07,78;UBERON:0007798,2.97e-07,78;UBERON:0004876,3.42e-07,11;UBERON:0007100,3.85e-07,27;UBERON:0006914,4.37e-07,25;UBERON:0000080,6.13e-07,9;UBERON:0002120,6.13e-07,9;UBERON:0004875,6.13e-07,9;UBERON:0005721,6.13e-07,9;UBERON:0005754,6.13e-07,9;UBERON:0007297,6.13e-07,9;UBERON:0004151,8.42e-07,3;UBERON:0001049,8.89e-07,56;UBERON:0005068,8.89e-07,56;UBERON:0006241,8.89e-07,56;UBERON:0007135,8.89e-07,56 | |||
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| ||
|short_description=p11@PXN | |short_description=p11@PXN | ||
}} | }} |
Latest revision as of 19:37, 16 September 2015
Short description: | p11@PXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PXN_5end |
Coexpression cluster: | C3244_heart_lung_giant_Endothelial_Renal_Placental_skeletal |
Association with transcript: | 115bp_to_uc001txx.2_5end |
EntrezGene: | PXN |
HGNC: | 9718 |
UniProt: | P49023 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.67e-18 | 36 |
meso-epithelial cell | 6.18e-15 | 45 |
endothelial cell of vascular tree | 1.01e-14 | 24 |
blood vessel endothelial cell | 5.93e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.93e-11 | 18 |
lining cell | 4.17e-10 | 58 |
barrier cell | 4.17e-10 | 58 |
glomerular endothelial cell | 6.65e-07 | 5 |
placental epithelial cell | 8.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.12e-34 | 114 |
anatomical conduit | 4.74e-12 | 240 |
blood vessel endothelium | 5.93e-11 | 18 |
endothelium | 5.93e-11 | 18 |
cardiovascular system endothelium | 5.93e-11 | 18 |
tube | 1.27e-10 | 192 |
splanchnic layer of lateral plate mesoderm | 7.16e-10 | 83 |
chorion | 1.26e-09 | 7 |
compound organ | 1.83e-09 | 68 |
vessel | 2.92e-09 | 68 |
placenta | 1.76e-08 | 4 |
allantois | 1.76e-08 | 4 |
simple squamous epithelium | 1.97e-08 | 22 |
circulatory system | 4.48e-08 | 112 |
extraembryonic membrane | 2.11e-07 | 14 |
membranous layer | 2.11e-07 | 14 |
vasculature | 2.97e-07 | 78 |
vascular system | 2.97e-07 | 78 |
urogenital ridge | 3.42e-07 | 11 |
primary circulatory organ | 3.85e-07 | 27 |
squamous epithelium | 4.37e-07 | 25 |
mesonephros | 6.13e-07 | 9 |
pronephros | 6.13e-07 | 9 |
nephrogenic cord | 6.13e-07 | 9 |
pronephric mesoderm | 6.13e-07 | 9 |
rostral part of nephrogenic cord | 6.13e-07 | 9 |
presumptive pronephric mesoderm | 6.13e-07 | 9 |
cardiac chamber | 8.42e-07 | 3 |
neural tube | 8.89e-07 | 56 |
neural rod | 8.89e-07 | 56 |
future spinal cord | 8.89e-07 | 56 |
neural keel | 8.89e-07 | 56 |