FFCP PHASE1:Hg19::chr6:166756093..166756102,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:166756093..166756102,- to FFCP PHASE1:Hg19::chr6:166756093..166756102,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=113402 | |EntrezGene=113402 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21102 | |HGNC=21102 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WV19 | |UniProt=Q8WV19 | ||
|association_with_transcript=-14bp_to_ENST00000361731_5end | |||
|cluster_id=chr6:166756093..166756102,- | |||
|description=CAGE_peak_2_at_SFT2D1_5end | |||
|id=chr6:166756093..166756102,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.06e-07;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!6.46e-11!511;UBERON:0000033!3.60e-09!123;UBERON:0007023!5.49e-09!115;UBERON:0001049!5.53e-09!57;UBERON:0005068!5.53e-09!57;UBERON:0006241!5.53e-09!57;UBERON:0007135!5.53e-09!57;UBERON:0000468!8.31e-09!659;UBERON:0000481!1.02e-08!347;UBERON:0002616!1.59e-08!59;UBERON:0000153!2.96e-08!129;UBERON:0007811!2.96e-08!129;UBERON:0000475!3.39e-08!365;UBERON:0003080!4.75e-08!42;UBERON:0001893!7.21e-08!34;UBERON:0002780!7.41e-08!41;UBERON:0001890!7.41e-08!41;UBERON:0006240!7.41e-08!41;UBERON:0003075!9.83e-08!86;UBERON:0007284!9.83e-08!86;UBERON:0002020!1.28e-07!34;UBERON:0003528!1.28e-07!34;UBERON:0002791!1.44e-07!33;UBERON:0000064!2.06e-07!219;UBERON:0000467!2.12e-07!625;UBERON:0000955!2.78e-07!69;UBERON:0006238!2.78e-07!69;UBERON:0000480!3.26e-07!626;UBERON:0002050!4.92e-07!605;UBERON:0005423!4.92e-07!605;UBERON:0000922!5.30e-07!612;UBERON:0004121!5.31e-07!169;UBERON:0001869!7.96e-07!32;UBERON:0000923!8.42e-07!604;UBERON:0005291!8.42e-07!604;UBERON:0006598!8.42e-07!604;UBERON:0002532!8.42e-07!604;UBERON:0003056!8.45e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.52e-10;34!UBERON:0002791;4.76e-10;32!UBERON:0003528;5.57e-10;34!UBERON:0002020;5.57e-10;34!UBERON:0002780;3.53e-09;41!UBERON:0001890;3.53e-09;41!UBERON:0002619;9.28e-09;22!UBERON:0001869;1.42e-08;32!UBERON:0001950;2.33e-08;20!UBERON:0000073;6.96e-08;53!UBERON:0002616;6.96e-08;53!UBERON:0000956;2.22e-07;25!UBERON:0000203;2.22e-07;25!UBERON:0002420;8.46e-07;9!UBERON:0007245;8.46e-07;9!UBERON:0010009;8.46e-07;9!UBERON:0010011;8.46e-07;9!UBERON:0000454;8.46e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.84e-13,56;UBERON:0005068,2.84e-13,56;UBERON:0006241,2.84e-13,56;UBERON:0007135,2.84e-13,56;UBERON:0000073,4.82e-13,53;UBERON:0002616,4.82e-13,53;UBERON:0002780,6.75e-13,41;UBERON:0001890,6.75e-13,41;UBERON:0003080,6.75e-13,41;UBERON:0006240,6.75e-13,41;UBERON:0010371,7.58e-13,104;UBERON:0001893,1.20e-11,34;UBERON:0000955,2.31e-11,68;UBERON:0006238,2.31e-11,68;UBERON:0003528,2.77e-11,34;UBERON:0002020,2.77e-11,34;UBERON:0003056,3.03e-11,61;UBERON:0002791,5.19e-11,32;UBERON:0003075,1.17e-10,82;UBERON:0007284,1.17e-10,82;UBERON:0001017,3.85e-10,81;UBERON:0002346,8.95e-10,86;UBERON:0004121,1.38e-09,171;UBERON:0000924,1.38e-09,171;UBERON:0006601,1.38e-09,171;UBERON:0001869,1.77e-09,32;UBERON:0010314,4.66e-09,132;UBERON:0002619,2.20e-08,22;UBERON:0001016,2.38e-08,89;UBERON:0001950,4.19e-08,20;UBERON:0007023,3.66e-07,114;UBERON:0000956,4.62e-07,25;UBERON:0000203,4.62e-07,25 | |||
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| ||
|short_description=p2@SFT2D1 | |||
}} | }} |
Latest revision as of 20:24, 16 September 2015
Short description: | p2@SFT2D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SFT2D1_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000361731_5end |
EntrezGene: | SFT2D1 |
HGNC: | 21102 |
UniProt: | Q8WV19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.84e-13 | 56 |
neural rod | 2.84e-13 | 56 |
future spinal cord | 2.84e-13 | 56 |
neural keel | 2.84e-13 | 56 |
regional part of nervous system | 4.82e-13 | 53 |
regional part of brain | 4.82e-13 | 53 |
regional part of forebrain | 6.75e-13 | 41 |
forebrain | 6.75e-13 | 41 |
anterior neural tube | 6.75e-13 | 41 |
future forebrain | 6.75e-13 | 41 |
ecto-epithelium | 7.58e-13 | 104 |
telencephalon | 1.20e-11 | 34 |
brain | 2.31e-11 | 68 |
future brain | 2.31e-11 | 68 |
brain grey matter | 2.77e-11 | 34 |
gray matter | 2.77e-11 | 34 |
pre-chordal neural plate | 3.03e-11 | 61 |
regional part of telencephalon | 5.19e-11 | 32 |
neural plate | 1.17e-10 | 82 |
presumptive neural plate | 1.17e-10 | 82 |
central nervous system | 3.85e-10 | 81 |
neurectoderm | 8.95e-10 | 86 |
ectoderm-derived structure | 1.38e-09 | 171 |
ectoderm | 1.38e-09 | 171 |
presumptive ectoderm | 1.38e-09 | 171 |
cerebral hemisphere | 1.77e-09 | 32 |
structure with developmental contribution from neural crest | 4.66e-09 | 132 |
regional part of cerebral cortex | 2.20e-08 | 22 |
nervous system | 2.38e-08 | 89 |
neocortex | 4.19e-08 | 20 |
adult organism | 3.66e-07 | 114 |
cerebral cortex | 4.62e-07 | 25 |
pallium | 4.62e-07 | 25 |