FFCP PHASE1:Hg19::chr9:18474125..18474160,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:18474125..18474160,+ to FFCP PHASE1:Hg19::chr9:18474125..18474160,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92949 | |EntrezGene=92949 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14632 | |HGNC=14632 | ||
|TSSclassifier=strong | |||
|UniProt=A6NIB9,F8WEP3 | |UniProt=A6NIB9,F8WEP3 | ||
|association_with_transcript=0bp_to_ENST00000380570,ENST00000431052_5end | |||
|cluster_id=chr9:18474125..18474160,+ | |||
|coexpression_cluster_id=C4811 | |||
|description=CAGE_peak_1_at_ADAMTSL1_5end | |||
|id=chr9:18474125..18474160,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.46e-46!180;CL:0000057!2.49e-25!75;CL:0000222!3.58e-21!119;CL:0000680!3.76e-20!57;CL:0000056!3.76e-20!57;CL:0000355!3.76e-20!57;CL:0000183!3.43e-19!59;CL:0000187!1.69e-18!54;CL:0000393!1.08e-17!60;CL:0000211!1.08e-17!60;CL:0000192!4.96e-14!42;CL:0000514!4.96e-14!42;CL:0002620!6.58e-13!23;CL:0000220!4.67e-12!246;CL:0000359!5.42e-12!32;CL:0002321!9.92e-12!248;CL:0002371!4.55e-08!591;CL:0002334!9.25e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.90e-14;23!CL:0000359;3.06e-12;32!CL:0000192;1.48e-11;43!CL:0000187;1.77e-11;55!CL:0000057;1.14e-10;73!CL:0000393;7.52e-10;61!CL:0000211;7.52e-10;61!CL:0002320;4.84e-08;188!CL:0002334;2.98e-07;12!CL:0002139;5.03e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.04e-28,76;CL:0000680,2.33e-22,58;CL:0000056,2.33e-22,58;CL:0000355,2.33e-22,58;CL:0000222,1.05e-21,121;CL:0000187,1.52e-20,55;CL:0000393,1.09e-18,61;CL:0000211,1.09e-18,61;CL:0000192,1.21e-15,43;CL:0000514,1.21e-15,43;CL:0002620,4.06e-14,23;CL:0000359,5.73e-13,32;CL:0002321,8.33e-10,250;CL:0000048,1.04e-09,427;CL:0000723,1.82e-09,433;CL:0000034,2.76e-08,441;CL:0002334,3.00e-07,12;CL:0002139,5.06e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000355;5.19e-12;58!CL:0000514;1.48e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.25e-26!83;UBERON:0002329!5.25e-26!83;UBERON:0003077!5.25e-26!83;UBERON:0003059!5.25e-26!83;UBERON:0007282!5.25e-26!83;UBERON:0009618!5.25e-26!83;UBERON:0007285!5.25e-26!83;UBERON:0004290!4.16e-23!70;UBERON:0002049!1.09e-22!79;UBERON:0007798!1.09e-22!79;UBERON:0000486!1.10e-19!82;UBERON:0001134!2.30e-19!61;UBERON:0002036!2.30e-19!61;UBERON:0003082!2.30e-19!61;UBERON:0000055!2.47e-19!69;UBERON:0002385!2.61e-19!63;UBERON:0001015!2.61e-19!63;UBERON:0000383!2.61e-19!63;UBERON:0004872!3.65e-19!84;UBERON:0001981!8.12e-18!60;UBERON:0007500!8.12e-18!60;UBERON:0004537!8.12e-18!60;UBERON:0006965!8.12e-18!60;UBERON:0004535!4.47e-16!110;UBERON:0005256!8.06e-16!143;UBERON:0001009!1.11e-15!113;UBERON:0001637!6.14e-15!42;UBERON:0003509!6.14e-15!42;UBERON:0004572!6.14e-15!42;UBERON:0000475!1.60e-14!365;UBERON:0003914!1.35e-12!118;UBERON:0004573!1.54e-12!33;UBERON:0004571!1.54e-12!33;UBERON:0000490!3.56e-12!138;UBERON:0000119!6.43e-12!312;UBERON:0000468!7.59e-12!659;UBERON:0000483!1.78e-11!309;UBERON:0002199!2.70e-11!45;UBERON:0002416!2.70e-11!45;UBERON:0003102!2.83e-10!95;UBERON:0002097!7.11e-10!40;UBERON:0002100!9.90e-10!216;UBERON:0000481!1.25e-09!347;UBERON:0000467!4.93e-09!625;UBERON:0000480!7.43e-09!626;UBERON:0000947!1.08e-08!21;UBERON:0010191!1.08e-08!21;UBERON:0000477!1.18e-08!286;UBERON:0003104!3.52e-07!238;UBERON:0009142!3.52e-07!238;UBERON:0004111!9.01e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.34e-12;33!UBERON:0004571;1.34e-12;33!UBERON:0001637;3.73e-12;42!UBERON:0003509;3.73e-12;42!UBERON:0004572;3.73e-12;42!UBERON:0007500;4.74e-11;56!UBERON:0001981;4.74e-11;56!UBERON:0004537;4.74e-11;56!UBERON:0002385;1.09e-10;31!UBERON:0001015;1.09e-10;31!UBERON:0000383;1.09e-10;31!UBERON:0000055;1.55e-10;65!UBERON:0002049;1.77e-10;75!UBERON:0007798;1.77e-10;75!UBERON:0000947;2.33e-09;21!UBERON:0010191;2.33e-09;21!UBERON:0002199;8.38e-09;46!UBERON:0002416;8.38e-09;46!UBERON:0002097;1.06e-08;41!UBERON:0002204;1.82e-08;70!UBERON:0003914;9.36e-08;74!UBERON:0003102;1.04e-07;50!UBERON:0002384;3.63e-07;198!UBERON:0001013;4.41e-07;14 | |||
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| ||
|short_description=p1@ADAMTSL1 | |||
}} | }} |
Latest revision as of 20:36, 16 September 2015
Short description: | p1@ADAMTSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAMTSL1_5end |
Coexpression cluster: | C4811_Fibroblast_extraskeletal_leiomyoma_Smooth_giant_mesenchymal_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000380570, ENST00000431052_5end |
EntrezGene: | ADAMTSL1 |
HGNC: | 14632 |
UniProt: | A6NIB9F8WEP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.04e-28 | 76 |
muscle precursor cell | 2.33e-22 | 58 |
myoblast | 2.33e-22 | 58 |
multi-potent skeletal muscle stem cell | 2.33e-22 | 58 |
mesodermal cell | 1.05e-21 | 121 |
muscle cell | 1.52e-20 | 55 |
electrically responsive cell | 1.09e-18 | 61 |
electrically active cell | 1.09e-18 | 61 |
smooth muscle cell | 1.21e-15 | 43 |
smooth muscle myoblast | 1.21e-15 | 43 |
skin fibroblast | 4.06e-14 | 23 |
vascular associated smooth muscle cell | 5.73e-13 | 32 |
embryonic cell | 8.33e-10 | 250 |
multi fate stem cell | 1.04e-09 | 427 |
somatic stem cell | 1.82e-09 | 433 |
stem cell | 2.76e-08 | 441 |
preadipocyte | 3.00e-07 | 12 |
endothelial cell of vascular tree | 5.06e-07 | 24 |