FFCP PHASE1:Hg19::chr16:53133070..53133081,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80205 | |EntrezGene=80205 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25701 | |HGNC=25701 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NAR9 | |UniProt=Q8NAR9 | ||
|association_with_transcript=0bp_to_uc002egz.1_5end | |association_with_transcript=0bp_to_uc002egz.1_5end | ||
|cluster_id=chr16:53133070..53133081,+ | |||
|description=CAGE_peak_6_at_CHD9_5end | |description=CAGE_peak_6_at_CHD9_5end | ||
|id=chr16:53133070..53133081,+ | |id=chr16:53133070..53133081,+ | ||
|ontology_enrichment_celltype=CL:0000557!4.91e-28!71;CL:0002009!1.68e-27!65;CL:0000766!9.37e-27!76;CL:0002194!1.80e-26!63;CL:0000576!1.80e-26!63;CL:0000040!1.80e-26!63;CL:0000559!1.80e-26!63;CL:0000839!3.98e-26!70;CL:0002057!4.34e-24!42;CL:0000860!8.04e-21!45;CL:0000738!3.05e-17!140;CL:0000763!1.23e-16!112;CL:0000049!1.23e-16!112;CL:0002031!1.17e-14!124;CL:0002087!5.87e-14!119;CL:0000134!9.20e-14!358;CL:0000219!7.82e-13!390;CL:0002320!1.41e-12!365;CL:0000048!4.00e-12!430;CL:0000034!6.21e-12!444;CL:0000723!8.56e-12!436;CL:0000988!1.18e-11!182;CL:0000037!1.46e-11!172;CL:0000566!1.46e-11!172;CL:0002032!1.73e-10!165;CL:0000837!1.73e-10!165 | |ontology_enrichment_celltype=CL:0000557!4.91e-28!71;CL:0002009!1.68e-27!65;CL:0000766!9.37e-27!76;CL:0002194!1.80e-26!63;CL:0000576!1.80e-26!63;CL:0000040!1.80e-26!63;CL:0000559!1.80e-26!63;CL:0000839!3.98e-26!70;CL:0002057!4.34e-24!42;CL:0000860!8.04e-21!45;CL:0000738!3.05e-17!140;CL:0000763!1.23e-16!112;CL:0000049!1.23e-16!112;CL:0002031!1.17e-14!124;CL:0002087!5.87e-14!119;CL:0000134!9.20e-14!358;CL:0000219!7.82e-13!390;CL:0002320!1.41e-12!365;CL:0000048!4.00e-12!430;CL:0000034!6.21e-12!444;CL:0000723!8.56e-12!436;CL:0000988!1.18e-11!182;CL:0000037!1.46e-11!172;CL:0000566!1.46e-11!172;CL:0002032!1.73e-10!165;CL:0000837!1.73e-10!165 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.34e-49;39!CL:0000234;8.34e-49;39!CL:0000860;9.99e-48;33!CL:0002057;9.99e-48;33!CL:0000576;1.42e-28;48!CL:0000766;5.21e-23;69!CL:0000235;3.14e-13;6!CL:0000763;1.58e-10;100!CL:0000738;2.74e-08;136!CL:0000784;3.13e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.16e-62,48;CL:0000234,1.16e-62,48;CL:0002009,2.21e-59,61;CL:0002194,8.25e-59,59;CL:0000576,8.25e-59,59;CL:0000040,8.25e-59,59;CL:0000559,8.25e-59,59;CL:0000766,2.14e-58,72;CL:0000557,8.14e-56,67;CL:0000839,4.16e-54,66;CL:0000860,4.67e-51,42;CL:0002057,4.67e-51,42;CL:0000763,7.30e-36,108;CL:0000049,7.30e-36,108;CL:0000738,8.19e-31,136;CL:0002031,1.66e-26,120;CL:0002087,1.91e-26,115;CL:0000988,3.37e-22,177;CL:0000037,4.97e-22,168;CL:0002032,2.25e-20,161;CL:0000837,2.25e-20,161;CL:0000134,6.01e-16,354;CL:0002320,2.94e-15,361;CL:0000034,3.18e-13,441;CL:0000235,3.62e-13,6;CL:0000048,5.31e-13,427;CL:0000219,7.60e-13,386;CL:0000723,1.54e-12,433;CL:0000784,4.85e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.64e-37;42!CL:0000049;1.25e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.91e-26!80;UBERON:0001474!9.14e-26!86;UBERON:0004765!1.50e-23!101;UBERON:0001434!1.50e-23!101;UBERON:0002390!1.51e-22!102;UBERON:0003061!1.51e-22!102;UBERON:0002193!4.69e-19!112;UBERON:0002204!2.39e-16!167;UBERON:0002405!3.40e-16!115;UBERON:0002384!4.98e-13!375;UBERON:0003081!9.19e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.01e-49,76;UBERON:0001474,2.97e-49,82;UBERON:0004765,1.68e-45,90;UBERON:0001434,3.40e-41,100;UBERON:0002390,1.18e-40,98;UBERON:0003061,1.18e-40,98;UBERON:0002405,4.38e-38,93;UBERON:0002193,1.56e-35,108;UBERON:0002204,2.89e-24,167;UBERON:0003081,3.24e-17,203;UBERON:0002384,1.11e-15,371;UBERON:0000926,1.11e-11,315;UBERON:0004120,1.11e-11,315;UBERON:0006603,1.11e-11,315 | |||
|phase1_expression=0.908391896352783,0.856402095563933,0.422863212287913,0,0,0,2.53299878168311,0,0.522371256399677,0,0,0,0,0.37129905888014,0,0,0,0,0.975865597581014,0.123121058076788,0,0,0.286235987131057,0.684372125364421,0.125542639594803,0.993374274723366,0.903106483949403,1.57421562627358,2.36018566109342,1.15148819429164,1.85779347979291,0.919421224478927,0,0,0.0774672005803016,0.142169232487422,0,3.32397245119126,1.60435557976113,0.868043482863407,1.34349284543955,0.971680998056939,0.515151135268373,4.21654892460738,6.42389104270976,8.24785808038575,3.0215774797739,5.75635043230556,3.09706370895104,1.1507695692886,3.07392847834921,2.36482229888585,1.03423704220986,1.29096936716765,2.70852973188684,4.51781614902251,7.36846605156184,10.562003768919,3.67300670845083,7.38136762275015,6.39337125799041,1.64925650093358,2.79249120670285,7.2458207590558,1.45104619314292,1.70215567407342,1.86846674698672,1.7587406567972,6.25779502104242,3.69221035998698,1.21079900526674,6.2607198117886,8.54448446090388,0.633765858935825,1.27562579979026,0,0.561643155732475,0.450530678524519,0.964353520182481,0.570025487482497,0.39783335439818,2.00930569141097,0,0,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,1.32171328579026,2.24203425192614,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0,0,0,0.12786256184353,0,0,0.579386075843295,2.3858578411533,0.486634870302636,0.283604451492204,0.221729397462564,0,0.196468613246569,0,0,0.97364218096405,1.39303789839414,3.85578085504709,5.24679373471752,1.14398982156026,4.82894751728434,0.198762407366705,0,0.347140501607594,0,0,0,0,0.516833518338658,0,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0.225222960966644,0,0,0,1.31780417436063,0,0,0,0.506522046658319,1.58891016975863,0.860509862246441,0.354668382198357,0,0,0,1.8672662123986,0.67355336034844,0.653847612453835,0.454072282934794,1.72852777344,0,0.312160076830321,0.570471821544449,0.747243402759005,0.117434498643765,0,0.140450806702248,1.02077085627447,0.245668634623536,0.516628905878827,0,0,0,0,0.168336113954066,0.125118519871964,1.10825646193673,0,0.612975591598039,0,0.567160915800105,0,0.213557388818567,0.847727604638247,0,0.206105058476878,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,0,0,0.169560592310488,0.386521706326594,0,0.860413786167011,0,0,0,0,0.252320850875628,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0.34779121492523,0.469634776943287,0,0,0,0,0,1.23108503043699,8.42415354501256,3.71577905721821,0,1.17587489739202,0.567100388969546,0.179117045405697,0,0,8.37527504423104,0.880484340132261,0.207328115540772,0.720599767084807,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0.600686115687835,0,0.112131084345361,0,0.07333828582095,1.29271715757778,0,1.690605505112,0.797814349754612,0,0,0,0,0.428933980974443,0.542621605391443,0,0.65147236858747,1.06617584622764,0,1.20575750823834,0.871533458600294,2.7992437530976,2.43247561282381,4.01805673145701,6.32501818449095,0.479249710983165,0,0,1.88215698667853,2.05476322550383,1.79060963239896,0,0.394061520403854,0.646882724578552,0.513372145118994,2.03275699377971,0,0,0,0,0,0,0,0,0,0,1.45579603071565,0.535286966391485,0.630809660135739,0.117141414992713,1.20378439891088,2.27407504055985,0,0,0.184369168541703,0.521301686808497,0,0,0.413536052245775,1.07857100409308,0.213455115606889,0,0,0,0.496215615637554,0.61384789315225,0,0.384417447767103,0,0.321707842287215,0,0.154209693802656,0.710246901252508,0.328508624055237,0,0.116210378459959,0,0.802025881213139,0.184161977871793,0.34444334449382,0,0.393373244878272,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,1.19040304263846,1.32015199872941,0,0.650060246036521,0,0,0.308097234229289,0.460511024178389,0.137836572484531,0.429680979473094,0.435050081742686,0.596586391912706,0.267096106940212,0.661139661443912,0.384380134730212,1.27612712494584,0.2023155617111,0,0,0.6970372701606,0.308033580176089,0,0,0,0.286249773483982,0,0.949138274156178,0.190630193923825,0.511795582622668,0,0,0,0.899362287916574,0.54907405947211,0.235624804691373,0.202182481573316,0,0,0,1.21856744815642,0,0.272999822815972,0.565621727814851,0,0,0.66343897524122,0,0,0,0.405820753925408,0,0,0,0.0982490410131212,0.7133421029625,0.709522128141196,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0.284567373393656,0,0,0.5745161103971,0,0,0.280797178113459,0.684704037099577,0,0,0.169291777801603,0,0,0,0.687010689511529,0.307240764308458,0.223676107892416,0.333698283423817,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,1.61158997199083,0,0,0,0,0.296964680832639,0,0,0,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| ||
|short_description=p6@CHD9 | |short_description=p6@CHD9 | ||
}} | }} |
Latest revision as of 22:23, 16 September 2015
Short description: | p6@CHD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CHD9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002egz.1_5end |
EntrezGene: | CHD9 |
HGNC: | 25701 |
UniProt: | Q8NAR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.16e-62 | 48 |
phagocyte | 1.16e-62 | 48 |
macrophage dendritic cell progenitor | 2.21e-59 | 61 |
monopoietic cell | 8.25e-59 | 59 |
monocyte | 8.25e-59 | 59 |
monoblast | 8.25e-59 | 59 |
promonocyte | 8.25e-59 | 59 |
myeloid leukocyte | 2.14e-58 | 72 |
granulocyte monocyte progenitor cell | 8.14e-56 | 67 |
myeloid lineage restricted progenitor cell | 4.16e-54 | 66 |
classical monocyte | 4.67e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.67e-51 | 42 |
myeloid cell | 7.30e-36 | 108 |
common myeloid progenitor | 7.30e-36 | 108 |
leukocyte | 8.19e-31 | 136 |
hematopoietic lineage restricted progenitor cell | 1.66e-26 | 120 |
nongranular leukocyte | 1.91e-26 | 115 |
hematopoietic cell | 3.37e-22 | 177 |
hematopoietic stem cell | 4.97e-22 | 168 |
hematopoietic oligopotent progenitor cell | 2.25e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.25e-20 | 161 |
mesenchymal cell | 6.01e-16 | 354 |
connective tissue cell | 2.94e-15 | 361 |
stem cell | 3.18e-13 | 441 |
macrophage | 3.62e-13 | 6 |
multi fate stem cell | 5.31e-13 | 427 |
motile cell | 7.60e-13 | 386 |
somatic stem cell | 1.54e-12 | 433 |
plasmacytoid dendritic cell | 4.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.01e-49 | 76 |
bone element | 2.97e-49 | 82 |
skeletal element | 1.68e-45 | 90 |
skeletal system | 3.40e-41 | 100 |
hematopoietic system | 1.18e-40 | 98 |
blood island | 1.18e-40 | 98 |
immune system | 4.38e-38 | 93 |
hemolymphoid system | 1.56e-35 | 108 |
musculoskeletal system | 2.89e-24 | 167 |
lateral plate mesoderm | 3.24e-17 | 203 |
connective tissue | 1.11e-15 | 371 |
mesoderm | 1.11e-11 | 315 |
mesoderm-derived structure | 1.11e-11 | 315 |
presumptive mesoderm | 1.11e-11 | 315 |