FFCP PHASE1:Hg19::chr2:32236002..32236048,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51072 | |EntrezGene=51072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14014 | |HGNC=14014 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y316 | |UniProt=Q9Y316 | ||
|association_with_transcript=0bp_to_ENST00000404530_5end | |association_with_transcript=0bp_to_ENST00000404530_5end | ||
|cluster_id=chr2:32236002..32236048,- | |||
|description=CAGE_peak_2_at_MEMO1_5end | |description=CAGE_peak_2_at_MEMO1_5end | ||
|id=chr2:32236002..32236048,- | |id=chr2:32236002..32236048,- | ||
|ontology_enrichment_celltype=CL:0000791!1.94e-08!18;CL:0000789!1.94e-08!18;CL:0002420!1.94e-08!18;CL:0002419!1.94e-08!18;CL:0000790!1.94e-08!18;CL:0000738!9.64e-08!140 | |ontology_enrichment_celltype=CL:0000791!1.94e-08!18;CL:0000789!1.94e-08!18;CL:0002420!1.94e-08!18;CL:0002419!1.94e-08!18;CL:0000790!1.94e-08!18;CL:0000738!9.64e-08!140 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.20e-08;18!CL:0000789;1.20e-08;18!CL:0002419;1.20e-08;18!CL:0000625;9.36e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.24e-08,18;CL:0000789,2.24e-08,18;CL:0002420,2.24e-08,18;CL:0002419,2.24e-08,18;CL:0000790,2.24e-08,18;CL:0000738,4.95e-08,136;CL:0002087,5.24e-07,115;CL:0000838,6.63e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000790;1.20e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.52e-24!115;UBERON:0001049!8.33e-21!57;UBERON:0005068!8.33e-21!57;UBERON:0006241!8.33e-21!57;UBERON:0007135!8.33e-21!57;UBERON:0002780!6.14e-20!41;UBERON:0001890!6.14e-20!41;UBERON:0006240!6.14e-20!41;UBERON:0003080!2.95e-19!42;UBERON:0002616!2.40e-18!59;UBERON:0005743!3.98e-18!86;UBERON:0001017!9.92e-18!82;UBERON:0000073!1.11e-17!94;UBERON:0001016!1.11e-17!94;UBERON:0001893!5.93e-17!34;UBERON:0000955!6.37e-17!69;UBERON:0006238!6.37e-17!69;UBERON:0002020!1.11e-16!34;UBERON:0003528!1.11e-16!34;UBERON:0001869!2.24e-16!32;UBERON:0002791!2.57e-16!33;UBERON:0002619!7.49e-14!22;UBERON:0000956!5.25e-13!25;UBERON:0000203!5.25e-13!25;UBERON:0001950!8.28e-13!20;UBERON:0002346!2.34e-12!90;UBERON:0003075!2.94e-12!86;UBERON:0007284!2.94e-12!86;UBERON:0003056!5.44e-11!61;UBERON:0000153!3.93e-08!129;UBERON:0007811!3.93e-08!129;UBERON:0000033!1.73e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!1.52e-24!115;UBERON:0001049!8.33e-21!57;UBERON:0005068!8.33e-21!57;UBERON:0006241!8.33e-21!57;UBERON:0007135!8.33e-21!57;UBERON:0002780!6.14e-20!41;UBERON:0001890!6.14e-20!41;UBERON:0006240!6.14e-20!41;UBERON:0003080!2.95e-19!42;UBERON:0002616!2.40e-18!59;UBERON:0005743!3.98e-18!86;UBERON:0001017!9.92e-18!82;UBERON:0000073!1.11e-17!94;UBERON:0001016!1.11e-17!94;UBERON:0001893!5.93e-17!34;UBERON:0000955!6.37e-17!69;UBERON:0006238!6.37e-17!69;UBERON:0002020!1.11e-16!34;UBERON:0003528!1.11e-16!34;UBERON:0001869!2.24e-16!32;UBERON:0002791!2.57e-16!33;UBERON:0002619!7.49e-14!22;UBERON:0000956!5.25e-13!25;UBERON:0000203!5.25e-13!25;UBERON:0001950!8.28e-13!20;UBERON:0002346!2.34e-12!90;UBERON:0003075!2.94e-12!86;UBERON:0007284!2.94e-12!86;UBERON:0003056!5.44e-11!61;UBERON:0000153!3.93e-08!129;UBERON:0007811!3.93e-08!129;UBERON:0000033!1.73e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.65e-16;34!UBERON:0002020;8.65e-16;34!UBERON:0001869;8.69e-16;32!UBERON:0001893;1.15e-15;34!UBERON:0002791;1.39e-15;32!UBERON:0002780;2.76e-15;41!UBERON:0001890;2.76e-15;41!UBERON:0002619;1.77e-14;22!UBERON:0000956;5.15e-14;25!UBERON:0000203;5.15e-14;25!UBERON:0001950;2.37e-13;20!UBERON:0000073;2.68e-13;53!UBERON:0002616;2.68e-13;53!UBERON:0000955;1.56e-09;68!UBERON:0001017;2.41e-08;75!UBERON:0001016;9.78e-08;83!UBERON:0007023;2.42e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.52e-24,114;UBERON:0001049,1.34e-21,56;UBERON:0005068,1.34e-21,56;UBERON:0006241,1.34e-21,56;UBERON:0007135,1.34e-21,56;UBERON:0000073,2.78e-21,53;UBERON:0002616,2.78e-21,53;UBERON:0002780,4.59e-20,41;UBERON:0001890,4.59e-20,41;UBERON:0003080,4.59e-20,41;UBERON:0006240,4.59e-20,41;UBERON:0001017,2.27e-18,81;UBERON:0001016,7.53e-18,89;UBERON:0000955,1.22e-17,68;UBERON:0006238,1.22e-17,68;UBERON:0001893,4.65e-17,34;UBERON:0003528,8.76e-17,34;UBERON:0002020,8.76e-17,34;UBERON:0001869,1.78e-16,32;UBERON:0002791,3.54e-16,32;UBERON:0002619,6.17e-14,22;UBERON:0000956,4.38e-13,25;UBERON:0000203,4.38e-13,25;UBERON:0001950,6.93e-13,20;UBERON:0002346,1.49e-12,86;UBERON:0003075,1.62e-12,82;UBERON:0007284,1.62e-12,82;UBERON:0003056,5.04e-11,61;UBERON:0010371,9.71e-07,104 | |||
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| ||
|short_description=p2@MEMO1 | |short_description=p2@MEMO1 | ||
}} | }} |
Latest revision as of 22:57, 16 September 2015
Short description: | p2@MEMO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MEMO1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000404530_5end |
EntrezGene: | MEMO1 |
HGNC: | 14014 |
UniProt: | Q9Y316 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.24e-08 | 18 |
alpha-beta T cell | 2.24e-08 | 18 |
immature T cell | 2.24e-08 | 18 |
mature T cell | 2.24e-08 | 18 |
immature alpha-beta T cell | 2.24e-08 | 18 |
leukocyte | 4.95e-08 | 136 |
nongranular leukocyte | 5.24e-07 | 115 |
lymphoid lineage restricted progenitor cell | 6.63e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.52e-24 | 114 |
neural tube | 1.34e-21 | 56 |
neural rod | 1.34e-21 | 56 |
future spinal cord | 1.34e-21 | 56 |
neural keel | 1.34e-21 | 56 |
regional part of nervous system | 2.78e-21 | 53 |
regional part of brain | 2.78e-21 | 53 |
regional part of forebrain | 4.59e-20 | 41 |
forebrain | 4.59e-20 | 41 |
anterior neural tube | 4.59e-20 | 41 |
future forebrain | 4.59e-20 | 41 |
central nervous system | 2.27e-18 | 81 |
nervous system | 7.53e-18 | 89 |
brain | 1.22e-17 | 68 |
future brain | 1.22e-17 | 68 |
telencephalon | 4.65e-17 | 34 |
brain grey matter | 8.76e-17 | 34 |
gray matter | 8.76e-17 | 34 |
cerebral hemisphere | 1.78e-16 | 32 |
regional part of telencephalon | 3.54e-16 | 32 |
regional part of cerebral cortex | 6.17e-14 | 22 |
cerebral cortex | 4.38e-13 | 25 |
pallium | 4.38e-13 | 25 |
neocortex | 6.93e-13 | 20 |
neurectoderm | 1.49e-12 | 86 |
neural plate | 1.62e-12 | 82 |
presumptive neural plate | 1.62e-12 | 82 |
pre-chordal neural plate | 5.04e-11 | 61 |
ecto-epithelium | 9.71e-07 | 104 |