FFCP PHASE1:Hg19::chr3:182971063..182971082,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84002 | |EntrezGene=84002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15684 | |HGNC=15684 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000493370_5end | |association_with_transcript=0bp_to_ENST00000493370_5end | ||
|cluster_id=chr3:182971063..182971082,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_1_at_B3GNT5_5end | |description=CAGE_peak_1_at_B3GNT5_5end | ||
|id=chr3:182971063..182971082,+ | |id=chr3:182971063..182971082,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.33e-21!42;CL:0000766!9.32e-20!76;CL:0000860!4.06e-18!45;CL:0000557!6.53e-17!71;CL:0000839!6.15e-15!70;CL:0002009!6.74e-15!65;CL:0002194!7.68e-14!63;CL:0000576!7.68e-14!63;CL:0000040!7.68e-14!63;CL:0000559!7.68e-14!63;CL:0000763!1.95e-12!112;CL:0000049!1.95e-12!112;CL:0002076!4.81e-08!43 | |ontology_enrichment_celltype=CL:0002057!1.33e-21!42;CL:0000766!9.32e-20!76;CL:0000860!4.06e-18!45;CL:0000557!6.53e-17!71;CL:0000839!6.15e-15!70;CL:0002009!6.74e-15!65;CL:0002194!7.68e-14!63;CL:0000576!7.68e-14!63;CL:0000040!7.68e-14!63;CL:0000559!7.68e-14!63;CL:0000763!1.95e-12!112;CL:0000049!1.95e-12!112;CL:0002076!4.81e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.59e-22;33!CL:0002057;4.59e-22;33!CL:0000473;1.06e-14;39!CL:0000234;1.06e-14;39!CL:0000576;9.33e-13;48!CL:0000766;2.04e-10;69!CL:0002076;3.31e-08;42!CL:0000094;6.98e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.66e-24,72;CL:0000860,1.30e-23,42;CL:0002057,1.30e-23,42;CL:0000557,6.54e-21,67;CL:0000473,3.09e-19,48;CL:0000234,3.09e-19,48;CL:0002009,1.50e-18,61;CL:0000839,5.50e-18,66;CL:0002194,2.80e-17,59;CL:0000576,2.80e-17,59;CL:0000040,2.80e-17,59;CL:0000559,2.80e-17,59;CL:0000763,1.23e-15,108;CL:0000049,1.23e-15,108;CL:0002076,9.34e-10,42;CL:0000094,7.55e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.42e-17;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002050!1.22e-15!605;UBERON:0005423!1.22e-15!605;UBERON:0000922!1.40e-15!612;UBERON:0000923!1.50e-15!604;UBERON:0005291!1.50e-15!604;UBERON:0006598!1.50e-15!604;UBERON:0002532!1.50e-15!604;UBERON:0000467!3.72e-13!625;UBERON:0002371!6.73e-13!80;UBERON:0000480!6.85e-13!626;UBERON:0002193!8.84e-13!112;UBERON:0000468!1.91e-12!659;UBERON:0002390!3.17e-11!102;UBERON:0003061!3.17e-11!102;UBERON:0001474!5.02e-10!86;UBERON:0004765!1.54e-09!101;UBERON:0001434!1.54e-09!101;UBERON:0002405!8.67e-09!115;UBERON:0000062!1.15e-07!511 | |ontology_enrichment_uberon=UBERON:0002050!1.22e-15!605;UBERON:0005423!1.22e-15!605;UBERON:0000922!1.40e-15!612;UBERON:0000923!1.50e-15!604;UBERON:0005291!1.50e-15!604;UBERON:0006598!1.50e-15!604;UBERON:0002532!1.50e-15!604;UBERON:0000467!3.72e-13!625;UBERON:0002371!6.73e-13!80;UBERON:0000480!6.85e-13!626;UBERON:0002193!8.84e-13!112;UBERON:0000468!1.91e-12!659;UBERON:0002390!3.17e-11!102;UBERON:0003061!3.17e-11!102;UBERON:0001474!5.02e-10!86;UBERON:0004765!1.54e-09!101;UBERON:0001434!1.54e-09!101;UBERON:0002405!8.67e-09!115;UBERON:0000062!1.15e-07!511 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.21e-16,108;UBERON:0002371,2.34e-16,76;UBERON:0002405,6.82e-16,93;UBERON:0004765,1.32e-15,90;UBERON:0002390,2.18e-14,98;UBERON:0003061,2.18e-14,98;UBERON:0001434,1.06e-13,100;UBERON:0001474,2.25e-13,82;UBERON:0000922,1.57e-12,592;UBERON:0005423,2.90e-12,581;UBERON:0002050,5.99e-12,564;UBERON:0000923,7.18e-11,560;UBERON:0010316,7.18e-11,560;UBERON:0005291,7.18e-11,560;UBERON:0006598,7.18e-11,560;UBERON:0010317,7.18e-11,560;UBERON:0002532,7.18e-11,560;UBERON:0002204,3.40e-07,167 | |||
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| ||
|short_description=p1@B3GNT5 | |short_description=p1@B3GNT5 | ||
}} | }} |
Latest revision as of 23:42, 16 September 2015
Short description: | p1@B3GNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_B3GNT5_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000493370_5end |
EntrezGene: | B3GNT5 |
HGNC: | 15684 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.66e-24 | 72 |
classical monocyte | 1.30e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.30e-23 | 42 |
granulocyte monocyte progenitor cell | 6.54e-21 | 67 |
defensive cell | 3.09e-19 | 48 |
phagocyte | 3.09e-19 | 48 |
macrophage dendritic cell progenitor | 1.50e-18 | 61 |
myeloid lineage restricted progenitor cell | 5.50e-18 | 66 |
monopoietic cell | 2.80e-17 | 59 |
monocyte | 2.80e-17 | 59 |
monoblast | 2.80e-17 | 59 |
promonocyte | 2.80e-17 | 59 |
myeloid cell | 1.23e-15 | 108 |
common myeloid progenitor | 1.23e-15 | 108 |
endo-epithelial cell | 9.34e-10 | 42 |
granulocyte | 7.55e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.21e-16 | 108 |
bone marrow | 2.34e-16 | 76 |
immune system | 6.82e-16 | 93 |
skeletal element | 1.32e-15 | 90 |
hematopoietic system | 2.18e-14 | 98 |
blood island | 2.18e-14 | 98 |
skeletal system | 1.06e-13 | 100 |
bone element | 2.25e-13 | 82 |
embryo | 1.57e-12 | 592 |
developing anatomical structure | 2.90e-12 | 581 |
embryonic structure | 5.99e-12 | 564 |
germ layer | 7.18e-11 | 560 |
germ layer / neural crest | 7.18e-11 | 560 |
embryonic tissue | 7.18e-11 | 560 |
presumptive structure | 7.18e-11 | 560 |
germ layer / neural crest derived structure | 7.18e-11 | 560 |
epiblast (generic) | 7.18e-11 | 560 |
musculoskeletal system | 3.40e-07 | 167 |