FFCP PHASE1:Hg19::chr1:247579451..247579465,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114548 | |EntrezGene=114548 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16400 | |HGNC=16400 | ||
|TSSclassifier=strong | |||
|UniProt=Q96P20,B2RC97 | |UniProt=Q96P20,B2RC97 | ||
|association_with_transcript=0bp_to_ENST00000366497,ENST00000391828,NM_001079821,NM_001127461,uc001icr.2,uc001ics.2_5end | |association_with_transcript=0bp_to_ENST00000366497,ENST00000391828,NM_001079821,NM_001127461,uc001icr.2,uc001ics.2_5end | ||
|cluster_id=chr1:247579451..247579465,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_NLRP3_5end | |description=CAGE_peak_2_at_NLRP3_5end | ||
|id=chr1:247579451..247579465,+ | |id=chr1:247579451..247579465,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.47e-49!172;CL:0000566!3.47e-49!172;CL:0000763!5.37e-47!112;CL:0000049!5.37e-47!112;CL:0002032!8.41e-46!165;CL:0000837!8.41e-46!165;CL:0000766!6.83e-45!76;CL:0000988!3.41e-43!182;CL:0000738!8.12e-41!140;CL:0000839!1.40e-38!70;CL:0000557!1.47e-38!71;CL:0002194!2.72e-37!63;CL:0000576!2.72e-37!63;CL:0000040!2.72e-37!63;CL:0000559!2.72e-37!63;CL:0002009!8.60e-37!65;CL:0002087!4.91e-35!119;CL:0002031!2.17e-34!124;CL:0002057!4.04e-34!42;CL:0000860!3.07e-30!45;CL:0002393!2.68e-08!9;CL:0002397!2.68e-08!9;CL:0000094!1.20e-07!8;CL:0000134!1.46e-07!358 | |ontology_enrichment_celltype=CL:0000037!3.47e-49!172;CL:0000566!3.47e-49!172;CL:0000763!5.37e-47!112;CL:0000049!5.37e-47!112;CL:0002032!8.41e-46!165;CL:0000837!8.41e-46!165;CL:0000766!6.83e-45!76;CL:0000988!3.41e-43!182;CL:0000738!8.12e-41!140;CL:0000839!1.40e-38!70;CL:0000557!1.47e-38!71;CL:0002194!2.72e-37!63;CL:0000576!2.72e-37!63;CL:0000040!2.72e-37!63;CL:0000559!2.72e-37!63;CL:0002009!8.60e-37!65;CL:0002087!4.91e-35!119;CL:0002031!2.17e-34!124;CL:0002057!4.04e-34!42;CL:0000860!3.07e-30!45;CL:0002393!2.68e-08!9;CL:0002397!2.68e-08!9;CL:0000094!1.20e-07!8;CL:0000134!1.46e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.85e-41;33!CL:0002057;1.85e-41;33!CL:0000576;4.05e-40;48!CL:0000473;2.72e-37;39!CL:0000234;2.72e-37;39!CL:0000766;2.64e-32;69!CL:0000763;1.96e-24;100!CL:0002087;9.28e-15;104!CL:0000738;1.01e-13;136!CL:0000094;5.01e-12;8!CL:0000988;5.57e-11;177!CL:0002393;8.24e-10;6!CL:0002397;8.24e-10;6!CL:0000081;3.63e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.83e-74,108;CL:0000049,3.83e-74,108;CL:0000766,2.14e-72,72;CL:0000037,1.52e-70,168;CL:0000988,3.06e-65,177;CL:0002032,1.27e-64,161;CL:0000837,1.27e-64,161;CL:0002194,7.32e-64,59;CL:0000576,7.32e-64,59;CL:0000040,7.32e-64,59;CL:0000559,7.32e-64,59;CL:0002009,1.95e-63,61;CL:0000557,4.98e-62,67;CL:0000473,3.22e-61,48;CL:0000234,3.22e-61,48;CL:0000738,2.22e-59,136;CL:0000839,9.18e-59,66;CL:0000860,1.07e-57,42;CL:0002057,1.07e-57,42;CL:0002087,8.85e-51,115;CL:0002031,1.52e-46,120;CL:0000134,4.48e-20,354;CL:0002320,4.52e-19,361;CL:0000219,8.68e-17,386;CL:0000034,1.26e-13,441;CL:0000048,2.51e-13,427;CL:0002393,3.90e-13,9;CL:0002397,3.90e-13,9;CL:0000723,1.02e-12,433;CL:0000094,5.11e-12,8;CL:0000081,3.68e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.88e-41;42!CL:0000049;2.37e-21;108 | |||
|ontology_enrichment_disease=DOID:8692!8.67e-08!31;DOID:1240!1.86e-07!39 | |ontology_enrichment_disease=DOID:8692!8.67e-08!31;DOID:1240!1.86e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.22e-11;31!DOID:1240;2.16e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.71e-11,31;DOID:1240,5.12e-09,39;DOID:2531,5.72e-07,51;DOID:0060083,5.72e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.56e-38!102;UBERON:0003061!4.56e-38!102;UBERON:0002193!2.48e-33!112;UBERON:0002371!8.96e-33!80;UBERON:0001474!3.18e-29!86;UBERON:0004765!1.81e-23!101;UBERON:0001434!1.81e-23!101;UBERON:0002405!1.89e-20!115;UBERON:0003081!7.95e-16!216;UBERON:0007023!1.47e-12!115;UBERON:0002204!2.23e-10!167 | |ontology_enrichment_uberon=UBERON:0002390!4.56e-38!102;UBERON:0003061!4.56e-38!102;UBERON:0002193!2.48e-33!112;UBERON:0002371!8.96e-33!80;UBERON:0001474!3.18e-29!86;UBERON:0004765!1.81e-23!101;UBERON:0001434!1.81e-23!101;UBERON:0002405!1.89e-20!115;UBERON:0003081!7.95e-16!216;UBERON:0007023!1.47e-12!115;UBERON:0002204!2.23e-10!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.55e-11;15!UBERON:0000179;6.55e-11;15!UBERON:0000463;6.55e-11;15!UBERON:0002390;2.19e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.48e-62,98;UBERON:0003061,3.48e-62,98;UBERON:0002193,9.19e-56,108;UBERON:0002371,3.01e-54,76;UBERON:0001474,9.89e-49,82;UBERON:0002405,4.26e-45,93;UBERON:0004765,4.22e-44,90;UBERON:0001434,1.39e-37,100;UBERON:0003081,2.06e-23,203;UBERON:0002384,1.95e-19,371;UBERON:0002204,1.87e-17,167;UBERON:0000178,6.74e-11,15;UBERON:0000179,6.74e-11,15;UBERON:0000463,6.74e-11,15;UBERON:0000926,2.01e-08,315;UBERON:0004120,2.01e-08,315;UBERON:0006603,2.01e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52826811495903,2.62721886239826,1.73163718890094,40.5165205154371,23.41359328393,36.2269728559618,0,0,0,0,0,4.11040615068786,74.7893801518035,83.0254012526387,67.9244025340616,5.82180233023803,4.21061765824673,3.8636335145128,12.9404432513813,8.69114670484262,10.1885305698883,17.8970358417377,13.5685403047203,17.3435567701258,29.6323164091815,25.359909946381,34.5264055637334,58.6067657252252,61.3210449404635,62.2961838333972,18.6359916147179,13.6453075028923,15.7306439111559,71.9297147071621,62.9020893069143,74.1631065926888,23.7492936134436,19.1485111316767,25.5734850319616,60.3635216347455,59.5754485925697,59.1681136545796,16.0799145764316,25.0311800841697,24.9767171410884,50.2481587185696,66.6582521137492,67.0900261374675,21.9705497764419,22.7486600962597,21.5948404873627,29.9917445161142,38.2951076745841,36.6454337669343,8.26536956849621,8.35450044236178,10.2291926108195,0,0,0,0,0,0,0,0,1.70763890732835,1.17447437874188,0.764546456250458,3.96513985737078,26.3439024601322,6.32121803460185,1.96709770113833,1.17903228824749,2.05601498999509,0,0,0,0,0.222820913770347,0.589211814949674,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0.552700035571697,0.579606171470105,0.14828656316206,0.535081656179426,0,0.113309342697566,0,0.34362744548263,1.77113784413652,0.95569624297229,0.651083453856419,0.950452044448374,1.35517607169996,1.27986611154418,2.49861453104692,0.236777252044017,1.64225599384209,1.81446068902259,2.13952156626806,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0.324547393654683,0.174129737299267,0.398873881556595,2.62339686735876,1.71598473234038,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,28.9916918359339,34.9002237733493,0,0,0,0.264818361626438,0.286836620748814,1.06400514659507,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.573609190778008,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70838706696137,0.702012795417713,2.82399208348584,1.87467667973554,0.839910640994298,0.425325291727159,0.985143749731331,2.03443756959773,0.766765358330422,0.492663237895943,0.44024217006613,1.03664057770386,1.29707958075265,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,8.51366464488333,3.51579964002488,6.32501818449095,0,0,0,0,0,0,0.336255431980582,4.72873824484625,0.862510299438069,4.87703537863044,0,0,0,0,0,12.7331194071021,11.966458368161,30.2523324808306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.6429624816743,22.0028484834989,17.0764092485511,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0,0,1.35359883872224,0.385076685522074,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,1.27438136522519,0.831076008928724,0.447749509444357,0.657779629937804,0.261435451024901,0,0,0,0.515205058238611,0,0,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0.192190067365106,0.255225424989168,0,0.464845549297286,0,1.3940745403212,0.308033580176089,0.532306030317022,3.47973196830029,0,0,0,0.316379424718726,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,1.32687795048244,0,0,0,0.608731130888112,0.6196469961995,1.40847801266121,0.143411352204052,0,0.7133421029625,0,0,0,0,0,0,0,0,0.847294206991012,0,0,1.33029046061003,0.689170200620878,12.6861902308042,6.88173486428138,4.5571774973933,3.81170840732462,3.70226045777575,9.07862635669804,8.64050299580984,2.37937552888281,0,0,0,0.743212700502875,0.144269212976445,0,0,4.98948428582042,1.53204296105893,4.44514523720154,1.62310970137278,1.40398589056729,6.61880569196257,1.09675927041116,2.50634477090067,4.23229444504008,9.63528450622197,10.0899853595524,5.96184732766457,7.90062292938259,8.29550063632837,8.05233988412697,10.5114959278502,8.40168810228773,0,0,0.270455678475983,3.66379164797602,0,0,1.17206543417515,0,0,4.54617834890261,0.23874448473769,1.18785872333055,0,0.994147647766298,0.562677665642051,1.55832187032068,0.494411622680279,0,0.19924798825107,0.552567831062295,0,0,0,0,2.24670877868317,0,7.67358555340308,0.493217028184668,2.3948309234694,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,3.05163472634166,0.110579259931225,0,0.219385397153973,0,0,0.153900517007594,0.683652335082007,0,0,0,0,0,0.533034776018635,3.06579894587209,2.5116841023204,0.332423363800313,0,0,0,0,0.317873157960757,3.58696709697646,0,0,0,0,0.442287822516696,0,0,0,0,1.88723172345896,0,0.937057782901357,0,0,0.242780379534093,0.789168805698781,0,0,2.84339608328196,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0.51595809741485,0,0,0,0.193978032976839,0,0.225980740780532,1.50746117111426,1.78843150532691,0.823040347426423,0,0.881747022766871,0.8538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| ||
|short_description=p2@NLRP3 | |short_description=p2@NLRP3 | ||
}} | }} |
Latest revision as of 23:53, 16 September 2015
Short description: | p2@NLRP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NLRP3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000366497, ENST00000391828, NM_001079821, NM_001127461, uc001icr.2, uc001ics.2_5end |
EntrezGene: | NLRP3 |
HGNC: | 16400 |
UniProt: | Q96P20B2RC97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.48e-62 | 98 |
blood island | 3.48e-62 | 98 |
hemolymphoid system | 9.19e-56 | 108 |
bone marrow | 3.01e-54 | 76 |
bone element | 9.89e-49 | 82 |
immune system | 4.26e-45 | 93 |
skeletal element | 4.22e-44 | 90 |
skeletal system | 1.39e-37 | 100 |
lateral plate mesoderm | 2.06e-23 | 203 |
connective tissue | 1.95e-19 | 371 |
musculoskeletal system | 1.87e-17 | 167 |
blood | 6.74e-11 | 15 |
haemolymphatic fluid | 6.74e-11 | 15 |
organism substance | 6.74e-11 | 15 |
mesoderm | 2.01e-08 | 315 |
mesoderm-derived structure | 2.01e-08 | 315 |
presumptive mesoderm | 2.01e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.71e-11 | 31 |
leukemia | 5.12e-09 | 39 |
hematologic cancer | 5.72e-07 | 51 |
immune system cancer | 5.72e-07 | 51 |