FFCP PHASE1:Hg19::chr16:55542958..55542972,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54947 | |EntrezGene=54947 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26032 | |HGNC=26032 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L5N7 | |UniProt=Q7L5N7 | ||
|association_with_transcript=45bp_to_NM_017839,uc002eie.3_5end | |association_with_transcript=45bp_to_NM_017839,uc002eie.3_5end | ||
|cluster_id=chr16:55542958..55542972,+ | |||
|coexpression_cluster_id=C3571 | |coexpression_cluster_id=C3571 | ||
|description=CAGE_peak_3_at_LPCAT2_5end | |description=CAGE_peak_3_at_LPCAT2_5end | ||
|id=chr16:55542958..55542972,+ | |id=chr16:55542958..55542972,+ | ||
|ontology_enrichment_celltype=CL:0000473;1.03e-13;39!CL:0000234;1.03e-13;39!CL:0000860;6.36e-13;33!CL:0002057;6.36e-13;33!CL:0000766;3.14e-12;69!CL:0000576;7.55e-10;48!CL:0000763;9.88e-09;100 | |ontology_enrichment_celltype=CL:0000763!3.62e-23!112;CL:0000049!3.62e-23!112;CL:0000766!1.56e-21!76;CL:0000557!9.45e-20!71;CL:0000839!1.89e-18!70;CL:0002009!1.73e-16!65;CL:0002194!3.34e-16!63;CL:0000576!3.34e-16!63;CL:0000040!3.34e-16!63;CL:0000559!3.34e-16!63;CL:0002057!9.57e-14!42;CL:0000860!1.16e-11!45 | ||
| | |ontology_enrichment_celltype_v019=CL:0000473;1.03e-13;39!CL:0000234;1.03e-13;39!CL:0000860;6.36e-13;33!CL:0002057;6.36e-13;33!CL:0000766;3.14e-12;69!CL:0000576;7.55e-10;48!CL:0000763;9.88e-09;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.98e-26,108;CL:0000049,1.98e-26,108;CL:0000766,2.81e-26,72;CL:0000557,2.23e-23,67;CL:0000839,1.22e-21,66;CL:0002194,1.39e-19,59;CL:0000576,1.39e-19,59;CL:0000040,1.39e-19,59;CL:0000559,1.39e-19,59;CL:0002009,1.80e-19,61;CL:0000473,3.02e-19,48;CL:0000234,3.02e-19,48;CL:0000860,6.51e-16,42;CL:0002057,6.51e-16,42;CL:0002032,8.46e-08,161;CL:0000837,8.46e-08,161;CL:0000037,3.31e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;8.05e-12;42!CL:0000049;4.39e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.39e-18!216;UBERON:0002371!5.72e-16!80;UBERON:0002390!7.13e-15!102;UBERON:0003061!7.13e-15!102;UBERON:0002193!1.46e-14!112;UBERON:0001474!1.91e-13!86;UBERON:0000467!3.10e-13!625;UBERON:0000480!5.98e-13!626;UBERON:0004765!1.15e-11!101;UBERON:0001434!1.15e-11!101;UBERON:0000468!1.84e-11!659;UBERON:0002204!1.07e-09!167;UBERON:0000062!4.06e-09!511;UBERON:0002050!5.20e-09!605;UBERON:0005423!5.20e-09!605;UBERON:0000923!7.20e-09!604;UBERON:0005291!7.20e-09!604;UBERON:0006598!7.20e-09!604;UBERON:0002532!7.20e-09!604;UBERON:0002405!8.43e-09!115;UBERON:0000922!1.20e-08!612;UBERON:0000926!2.55e-08!448;UBERON:0004120!2.55e-08!448;UBERON:0006603!2.55e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.91e-22,203;UBERON:0002371,2.57e-19,76;UBERON:0002390,5.14e-17,98;UBERON:0003061,5.14e-17,98;UBERON:0002193,6.43e-17,108;UBERON:0001474,1.36e-16,82;UBERON:0002405,4.24e-16,93;UBERON:0004765,9.37e-15,90;UBERON:0001434,1.77e-12,100;UBERON:0000926,2.43e-12,315;UBERON:0004120,2.43e-12,315;UBERON:0006603,2.43e-12,315;UBERON:0002050,4.70e-09,564;UBERON:0002204,1.68e-08,167;UBERON:0000923,1.92e-08,560;UBERON:0010316,1.92e-08,560;UBERON:0005291,1.92e-08,560;UBERON:0006598,1.92e-08,560;UBERON:0010317,1.92e-08,560;UBERON:0002532,1.92e-08,560;UBERON:0005423,2.19e-07,581;UBERON:0000922,4.61e-07,592 | |||
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| ||
|short_description=p3@LPCAT2 | |short_description=p3@LPCAT2 | ||
}} | }} |
Latest revision as of 00:27, 17 September 2015
Short description: | p3@LPCAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LPCAT2_5end |
Coexpression cluster: | C3571_Neutrophils_Mast_CD14_Eosinophils_Dendritic_thyroid_Prostate |
Association with transcript: | 45bp_to_NM_017839, uc002eie.3_5end |
EntrezGene: | LPCAT2 |
HGNC: | 26032 |
UniProt: | Q7L5N7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.98e-26 | 108 |
common myeloid progenitor | 1.98e-26 | 108 |
myeloid leukocyte | 2.81e-26 | 72 |
granulocyte monocyte progenitor cell | 2.23e-23 | 67 |
myeloid lineage restricted progenitor cell | 1.22e-21 | 66 |
monopoietic cell | 1.39e-19 | 59 |
monocyte | 1.39e-19 | 59 |
monoblast | 1.39e-19 | 59 |
promonocyte | 1.39e-19 | 59 |
macrophage dendritic cell progenitor | 1.80e-19 | 61 |
defensive cell | 3.02e-19 | 48 |
phagocyte | 3.02e-19 | 48 |
classical monocyte | 6.51e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.51e-16 | 42 |
hematopoietic oligopotent progenitor cell | 8.46e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.46e-08 | 161 |
hematopoietic stem cell | 3.31e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.91e-22 | 203 |
bone marrow | 2.57e-19 | 76 |
hematopoietic system | 5.14e-17 | 98 |
blood island | 5.14e-17 | 98 |
hemolymphoid system | 6.43e-17 | 108 |
bone element | 1.36e-16 | 82 |
immune system | 4.24e-16 | 93 |
skeletal element | 9.37e-15 | 90 |
skeletal system | 1.77e-12 | 100 |
mesoderm | 2.43e-12 | 315 |
mesoderm-derived structure | 2.43e-12 | 315 |
presumptive mesoderm | 2.43e-12 | 315 |
embryonic structure | 4.70e-09 | 564 |
musculoskeletal system | 1.68e-08 | 167 |
germ layer | 1.92e-08 | 560 |
germ layer / neural crest | 1.92e-08 | 560 |
embryonic tissue | 1.92e-08 | 560 |
presumptive structure | 1.92e-08 | 560 |
germ layer / neural crest derived structure | 1.92e-08 | 560 |
epiblast (generic) | 1.92e-08 | 560 |
developing anatomical structure | 2.19e-07 | 581 |
embryo | 4.61e-07 | 592 |