FFCP PHASE1:Hg19::chr3:185304059..185304124,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59343 | |EntrezGene=59343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23116 | |HGNC=23116 | ||
|TSSclassifier=strong | |||
|UniProt=F8WED7,Q9HC62,F8WCX8,F8WED6 | |UniProt=F8WED7,Q9HC62,F8WCX8,F8WED6 | ||
|association_with_transcript=0bp_to_ENST00000413407,ENST00000427465,ENST00000439684,ENST00000458551_5end | |association_with_transcript=0bp_to_ENST00000413407,ENST00000427465,ENST00000439684,ENST00000458551_5end | ||
|cluster_id=chr3:185304059..185304124,+ | |||
|description=CAGE_peak_1_at_SENP2_5end | |description=CAGE_peak_1_at_SENP2_5end | ||
|id=chr3:185304059..185304124,+ | |id=chr3:185304059..185304124,+ | ||
|ontology_enrichment_celltype=CL:0000037!6.18e-07!172;CL:0000566!6.18e-07!172 | |ontology_enrichment_celltype=CL:0000037!6.18e-07!172;CL:0000566!6.18e-07!172 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.60e-07;82 | |||
|ontology_enrichment_disease=DOID:0050687!1.65e-18!143;DOID:305!1.44e-17!106;DOID:162!6.04e-17!235;DOID:14566!3.79e-16!239;DOID:1749!8.95e-08!14 | |ontology_enrichment_disease=DOID:0050687!1.65e-18!143;DOID:305!1.44e-17!106;DOID:162!6.04e-17!235;DOID:14566!3.79e-16!239;DOID:1749!8.95e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;9.21e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.65e-18,143;DOID:305,1.44e-17,106;DOID:162,6.04e-17,235;DOID:14566,3.79e-16,239;DOID:1749,8.95e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.26e-16!57;UBERON:0005068!4.26e-16!57;UBERON:0006241!4.26e-16!57;UBERON:0007135!4.26e-16!57;UBERON:0002780!7.79e-16!41;UBERON:0001890!7.79e-16!41;UBERON:0006240!7.79e-16!41;UBERON:0003080!1.32e-15!42;UBERON:0000955!2.23e-14!69;UBERON:0006238!2.23e-14!69;UBERON:0001893!5.25e-13!34;UBERON:0000073!6.49e-13!94;UBERON:0001016!6.49e-13!94;UBERON:0002616!7.32e-13!59;UBERON:0001017!8.17e-13!82;UBERON:0002020!8.74e-13!34;UBERON:0003528!8.74e-13!34;UBERON:0001869!1.46e-12!32;UBERON:0002791!1.74e-12!33;UBERON:0005743!9.84e-12!86;UBERON:0002619!6.74e-10!22;UBERON:0000956!1.41e-09!25;UBERON:0000203!1.41e-09!25;UBERON:0002346!1.73e-09!90;UBERON:0003075!2.22e-09!86;UBERON:0007284!2.22e-09!86;UBERON:0001950!3.89e-09!20;UBERON:0003056!1.40e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.82e-11;34!UBERON:0002780;2.62e-11;41!UBERON:0001890;2.62e-11;41!UBERON:0001869;2.82e-11;32!UBERON:0003528;3.55e-11;34!UBERON:0002020;3.55e-11;34!UBERON:0002791;5.04e-11;32!UBERON:0002619;8.14e-10;22!UBERON:0000073;1.62e-09;53!UBERON:0002616;1.62e-09;53!UBERON:0000956;1.70e-09;25!UBERON:0000203;1.70e-09;25!UBERON:0001950;4.69e-09;20!UBERON:0000955;6.47e-08;68!UBERON:0001017;2.96e-07;75!UBERON:0001016;3.40e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.94e-16,56;UBERON:0005068,2.94e-16,56;UBERON:0006241,2.94e-16,56;UBERON:0007135,2.94e-16,56;UBERON:0002780,7.79e-16,41;UBERON:0001890,7.79e-16,41;UBERON:0003080,7.79e-16,41;UBERON:0006240,7.79e-16,41;UBERON:0000073,2.24e-15,53;UBERON:0002616,2.24e-15,53;UBERON:0000955,1.76e-14,68;UBERON:0006238,1.76e-14,68;UBERON:0001016,4.65e-14,89;UBERON:0001893,5.25e-13,34;UBERON:0001017,7.02e-13,81;UBERON:0003528,8.74e-13,34;UBERON:0002020,8.74e-13,34;UBERON:0001869,1.46e-12,32;UBERON:0002791,2.92e-12,32;UBERON:0002619,6.74e-10,22;UBERON:0000956,1.41e-09,25;UBERON:0000203,1.41e-09,25;UBERON:0001950,3.89e-09,20;UBERON:0002346,6.44e-09,86;UBERON:0003075,8.27e-09,82;UBERON:0007284,8.27e-09,82;UBERON:0003056,6.96e-08,61;UBERON:0011216,5.42e-07,223 | |||
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| ||
|short_description=p1@SENP2 | |short_description=p1@SENP2 | ||
}} | }} |
Latest revision as of 03:53, 17 September 2015
Short description: | p1@SENP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SENP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000413407, ENST00000427465, ENST00000439684, ENST00000458551_5end |
EntrezGene: | SENP2 |
HGNC: | 23116 |
UniProt: | F8WED7Q9HC62F8WCX8F8WED6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.94e-16 | 56 |
neural rod | 2.94e-16 | 56 |
future spinal cord | 2.94e-16 | 56 |
neural keel | 2.94e-16 | 56 |
regional part of forebrain | 7.79e-16 | 41 |
forebrain | 7.79e-16 | 41 |
anterior neural tube | 7.79e-16 | 41 |
future forebrain | 7.79e-16 | 41 |
regional part of nervous system | 2.24e-15 | 53 |
regional part of brain | 2.24e-15 | 53 |
brain | 1.76e-14 | 68 |
future brain | 1.76e-14 | 68 |
nervous system | 4.65e-14 | 89 |
telencephalon | 5.25e-13 | 34 |
central nervous system | 7.02e-13 | 81 |
brain grey matter | 8.74e-13 | 34 |
gray matter | 8.74e-13 | 34 |
cerebral hemisphere | 1.46e-12 | 32 |
regional part of telencephalon | 2.92e-12 | 32 |
regional part of cerebral cortex | 6.74e-10 | 22 |
cerebral cortex | 1.41e-09 | 25 |
pallium | 1.41e-09 | 25 |
neocortex | 3.89e-09 | 20 |
neurectoderm | 6.44e-09 | 86 |
neural plate | 8.27e-09 | 82 |
presumptive neural plate | 8.27e-09 | 82 |
pre-chordal neural plate | 6.96e-08 | 61 |
organ system subdivision | 5.42e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.65e-18 | 143 |
carcinoma | 1.44e-17 | 106 |
cancer | 6.04e-17 | 235 |
disease of cellular proliferation | 3.79e-16 | 239 |
squamous cell carcinoma | 8.95e-08 | 14 |