FFCP PHASE1:Hg19::chr7:150497777..150497810,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28959 | |EntrezGene=28959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29596 | |HGNC=29596 | ||
|TSSclassifier=strong | |||
|UniProt=Q3YBM2,E9PAV4 | |UniProt=Q3YBM2,E9PAV4 | ||
|association_with_transcript=-156bp_to_ENST00000434545,NM_001101311,NM_001101312,NM_001101314,uc003whu.3,uc003whv.3_5end | |association_with_transcript=-156bp_to_ENST00000434545,NM_001101311,NM_001101312,NM_001101314,uc003whu.3,uc003whv.3_5end | ||
|cluster_id=chr7:150497777..150497810,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_5_at_TMEM176B_5end | |description=CAGE_peak_5_at_TMEM176B_5end | ||
|id=chr7:150497777..150497810,- | |id=chr7:150497777..150497810,- | ||
|ontology_enrichment_celltype=CL:0002194!6.23e-13!63;CL:0000576!6.23e-13!63;CL:0000040!6.23e-13!63;CL:0000559!6.23e-13!63;CL:0002009!2.77e-12!65;CL:0000839!7.74e-11!70;CL:0000557!1.42e-10!71;CL:0000766!2.26e-09!76;CL:0002057!2.66e-09!42;CL:0000860!2.48e-08!45 | |ontology_enrichment_celltype=CL:0002194!6.23e-13!63;CL:0000576!6.23e-13!63;CL:0000040!6.23e-13!63;CL:0000559!6.23e-13!63;CL:0002009!2.77e-12!65;CL:0000839!7.74e-11!70;CL:0000557!1.42e-10!71;CL:0000766!2.26e-09!76;CL:0002057!2.66e-09!42;CL:0000860!2.48e-08!45 | ||
|ontology_enrichment_celltype_v019=CL:0002619;3.00e-18;3!CL:0000990;4.55e-16;8!CL:0000451;4.08e-13;10!CL:0000453;4.24e-11;5!CL:0000235;8.94e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,1.66e-18,3;CL:0000990,4.94e-16,8;CL:0000451,4.36e-13,10;CL:0000453,3.89e-11,5;CL:0000235,9.92e-10,6;CL:0002194,3.92e-08,59;CL:0000576,3.92e-08,59;CL:0000040,3.92e-08,59;CL:0000559,3.92e-08,59;CL:0002009,8.15e-08,61;CL:0000839,4.18e-07,66;CL:0000557,5.63e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.44e-08;3!UBERON:0000358;2.67e-07;1!UBERON:0006242;4.88e-07;1!UBERON:0005425;4.88e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.29e-18!115;UBERON:0002405!2.74e-11!115;UBERON:0002390!3.24e-10!102;UBERON:0003061!3.24e-10!102;UBERON:0002193!6.69e-10!112;UBERON:0000062!5.52e-09!511;UBERON:0002371!1.58e-08!80;UBERON:0000923!1.72e-08!604;UBERON:0005291!1.72e-08!604;UBERON:0006598!1.72e-08!604;UBERON:0002532!1.72e-08!604;UBERON:0000922!1.76e-08!612;UBERON:0002050!1.99e-08!605;UBERON:0005423!1.99e-08!605;UBERON:0001155!3.28e-08!9;UBERON:0000467!3.92e-08!625;UBERON:0000480!4.51e-08!626;UBERON:0000468!1.58e-07!659;UBERON:0001474!1.99e-07!86;UBERON:0000160!4.45e-07!27 | |ontology_enrichment_uberon=UBERON:0007023!1.29e-18!115;UBERON:0002405!2.74e-11!115;UBERON:0002390!3.24e-10!102;UBERON:0003061!3.24e-10!102;UBERON:0002193!6.69e-10!112;UBERON:0000062!5.52e-09!511;UBERON:0002371!1.58e-08!80;UBERON:0000923!1.72e-08!604;UBERON:0005291!1.72e-08!604;UBERON:0006598!1.72e-08!604;UBERON:0002532!1.72e-08!604;UBERON:0000922!1.76e-08!612;UBERON:0002050!1.99e-08!605;UBERON:0005423!1.99e-08!605;UBERON:0001155!3.28e-08!9;UBERON:0000467!3.92e-08!625;UBERON:0000480!4.51e-08!626;UBERON:0000468!1.58e-07!659;UBERON:0001474!1.99e-07!86;UBERON:0000160!4.45e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;3.32e-11;4!UBERON:0002423;3.40e-08;25!UBERON:0000160;3.73e-08;17!UBERON:0002107;7.06e-08;19!UBERON:0006925;7.06e-08;19!UBERON:0000996;4.88e-07;1!UBERON:0000941;4.88e-07;1!UBERON:0001785;4.88e-07;1!UBERON:0002464;4.88e-07;1!UBERON:0004904;4.88e-07;1!UBERON:0001021;4.88e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.21e-11,4;UBERON:0000160,3.10e-08,17;UBERON:0009497,3.31e-08,25;UBERON:0000015,3.31e-08,25;UBERON:0002423,3.31e-08,25;UBERON:0006235,3.31e-08,25;UBERON:0004161,3.31e-08,25;UBERON:0002107,7.27e-08,19;UBERON:0006925,7.27e-08,19;UBERON:0008836,7.27e-08,19;UBERON:0000941,4.08e-07,1;UBERON:0001785,4.08e-07,1;UBERON:0002464,4.08e-07,1;UBERON:0004904,4.08e-07,1;UBERON:0001021,4.08e-07,1;UBERON:0003902,4.08e-07,1;UBERON:0005425,4.08e-07,1;UBERON:0000996,4.89e-07,1;UBERON:0008835,9.40e-07,22;UBERON:0003894,9.40e-07,22 | |||
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| ||
|short_description=p5@TMEM176B | |short_description=p5@TMEM176B | ||
}} | }} |
Latest revision as of 04:01, 17 September 2015
Short description: | p5@TMEM176B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TMEM176B_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -156bp_to_ENST00000434545, NM_001101311, NM_001101312, NM_001101314, uc003whu.3, uc003whv.3_5end |
EntrezGene: | TMEM176B |
HGNC: | 29596 |
UniProt: | Q3YBM2E9PAV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 1.66e-18 | 3 |
conventional dendritic cell | 4.94e-16 | 8 |
dendritic cell | 4.36e-13 | 10 |
Langerhans cell | 3.89e-11 | 5 |
macrophage | 9.92e-10 | 6 |
monopoietic cell | 3.92e-08 | 59 |
monocyte | 3.92e-08 | 59 |
monoblast | 3.92e-08 | 59 |
promonocyte | 3.92e-08 | 59 |
macrophage dendritic cell progenitor | 8.15e-08 | 61 |
myeloid lineage restricted progenitor cell | 4.18e-07 | 66 |
granulocyte monocyte progenitor cell | 5.63e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.21e-11 | 4 |
intestine | 3.10e-08 | 17 |
epithelium of foregut-midgut junction | 3.31e-08 | 25 |
anatomical boundary | 3.31e-08 | 25 |
hepatobiliary system | 3.31e-08 | 25 |
foregut-midgut junction | 3.31e-08 | 25 |
septum transversum | 3.31e-08 | 25 |
liver | 7.27e-08 | 19 |
digestive gland | 7.27e-08 | 19 |
liver bud | 7.27e-08 | 19 |
cranial nerve II | 4.08e-07 | 1 |
cranial nerve | 4.08e-07 | 1 |
nerve trunk | 4.08e-07 | 1 |
nerve connecting eye with brain | 4.08e-07 | 1 |
nerve | 4.08e-07 | 1 |
retinal neural layer | 4.08e-07 | 1 |
presumptive neural retina | 4.08e-07 | 1 |
vagina | 4.89e-07 | 1 |
hepatic diverticulum | 9.40e-07 | 22 |
liver primordium | 9.40e-07 | 22 |