FFCP PHASE1:Hg19::chr2:39892091..39892110,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130733 | |EntrezGene=130733 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28517 | |HGNC=28517 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000437068_5end | |association_with_transcript=-11bp_to_ENST00000437068_5end | ||
|cluster_id=chr2:39892091..39892110,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_10_at_TMEM178_5end | |description=CAGE_peak_10_at_TMEM178_5end | ||
|id=chr2:39892091..39892110,+ | |id=chr2:39892091..39892110,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.06e-99;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.84e-50;6!UBERON:0002680;8.87e-34;9!UBERON:0001895;8.87e-34;9!UBERON:0004733;1.41e-25;12!UBERON:0002028;1.41e-25;12!UBERON:0004732;1.11e-23;13!UBERON:0000073;2.64e-09;53!UBERON:0002616;2.64e-09;53!UBERON:0000955;6.41e-08;68!UBERON:0002021;6.55e-08;5!UBERON:0001872;7.25e-08;5!UBERON:0001016;1.31e-07;83!UBERON:0001950;3.00e-07;20!UBERON:0001017;5.68e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.84e-50,6;UBERON:0006215,3.84e-50,6;UBERON:0002680,8.87e-34,9;UBERON:0001895,8.87e-34,9;UBERON:0010092,8.87e-34,9;UBERON:0004733,1.41e-25,12;UBERON:0002028,1.41e-25,12;UBERON:0007277,1.41e-25,12;UBERON:0004732,1.11e-23,13;UBERON:0003076,1.20e-20,15;UBERON:0003057,1.20e-20,15;UBERON:0000073,9.39e-16,53;UBERON:0002616,9.39e-16,53;UBERON:0001049,5.94e-15,56;UBERON:0005068,5.94e-15,56;UBERON:0006241,5.94e-15,56;UBERON:0007135,5.94e-15,56;UBERON:0000955,2.88e-12,68;UBERON:0006238,2.88e-12,68;UBERON:0001017,2.04e-10,81;UBERON:0003075,2.04e-10,82;UBERON:0007284,2.04e-10,82;UBERON:0002346,5.89e-10,86;UBERON:0001016,1.94e-09,89;UBERON:0010371,2.57e-08,104;UBERON:0002021,6.55e-08,5;UBERON:0001872,7.49e-08,5;UBERON:0007023,1.09e-07,114;UBERON:0001950,3.05e-07,20 | |||
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| ||
|short_description=p10@TMEM178 | |short_description=p10@TMEM178 | ||
}} | }} |
Latest revision as of 05:04, 17 September 2015
Short description: | p10@TMEM178 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TMEM178_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -11bp_to_ENST00000437068_5end |
EntrezGene: | TMEM178 |
HGNC: | 28517 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.84e-50 | 6 |
rhombic lip | 3.84e-50 | 6 |
regional part of metencephalon | 8.87e-34 | 9 |
metencephalon | 8.87e-34 | 9 |
future metencephalon | 8.87e-34 | 9 |
segmental subdivision of hindbrain | 1.41e-25 | 12 |
hindbrain | 1.41e-25 | 12 |
presumptive hindbrain | 1.41e-25 | 12 |
segmental subdivision of nervous system | 1.11e-23 | 13 |
posterior neural tube | 1.20e-20 | 15 |
chordal neural plate | 1.20e-20 | 15 |
regional part of nervous system | 9.39e-16 | 53 |
regional part of brain | 9.39e-16 | 53 |
neural tube | 5.94e-15 | 56 |
neural rod | 5.94e-15 | 56 |
future spinal cord | 5.94e-15 | 56 |
neural keel | 5.94e-15 | 56 |
brain | 2.88e-12 | 68 |
future brain | 2.88e-12 | 68 |
central nervous system | 2.04e-10 | 81 |
neural plate | 2.04e-10 | 82 |
presumptive neural plate | 2.04e-10 | 82 |
neurectoderm | 5.89e-10 | 86 |
nervous system | 1.94e-09 | 89 |
ecto-epithelium | 2.57e-08 | 104 |
occipital lobe | 6.55e-08 | 5 |
parietal lobe | 7.49e-08 | 5 |
adult organism | 1.09e-07 | 114 |
neocortex | 3.05e-07 | 20 |