FFCP PHASE1:Hg19::chr1:153581468..153581499,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140576 | |EntrezGene=140576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20441 | |HGNC=20441 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FQ6 | |UniProt=Q96FQ6 | ||
|association_with_transcript=0bp_to_uc001fcc.2_5end | |association_with_transcript=0bp_to_uc001fcc.2_5end | ||
|cluster_id=chr1:153581468..153581499,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_3_at_S100A16_5end | |description=CAGE_peak_3_at_S100A16_5end | ||
|id=chr1:153581468..153581499,- | |id=chr1:153581468..153581499,- | ||
|ontology_enrichment_celltype=CL:0000222!4.93e-34!119;CL:0000220!1.36e-27!246;CL:0002321!9.83e-27!248;CL:0000066!2.01e-19!254;CL:0002078!3.75e-18!44;CL:0000213!1.11e-17!57;CL:0000215!1.11e-17!57;CL:0000115!1.11e-17!35;CL:0002139!4.85e-17!24;CL:0000055!1.39e-15!180;CL:0000183!3.10e-14!59;CL:0000680!1.05e-13!57;CL:0000056!1.05e-13!57;CL:0000355!1.05e-13!57;CL:0000071!4.58e-13!18;CL:0002546!4.58e-13!18;CL:0000187!1.29e-12!54;CL:0000359!2.01e-12!32;CL:0000192!2.72e-11!42;CL:0000514!2.72e-11!42;CL:0000076!3.31e-10!62;CL:1000449!6.07e-10!16;CL:0000393!1.20e-09!60;CL:0000211!1.20e-09!60;CL:1000497!2.14e-09!18;CL:0002518!2.14e-09!18;CL:0000057!2.10e-08!75;CL:0002681!3.60e-08!13;CL:0002584!3.60e-08!13;CL:0000548!2.34e-07!679;CL:0000004!2.34e-07!679;CL:0000255!2.34e-07!679;CL:1000507!2.51e-07!12;CL:1000494!2.51e-07!12;CL:1000413!3.32e-07!9;CL:0000012!7.69e-07!682 | |ontology_enrichment_celltype=CL:0000222!4.93e-34!119;CL:0000220!1.36e-27!246;CL:0002321!9.83e-27!248;CL:0000066!2.01e-19!254;CL:0002078!3.75e-18!44;CL:0000213!1.11e-17!57;CL:0000215!1.11e-17!57;CL:0000115!1.11e-17!35;CL:0002139!4.85e-17!24;CL:0000055!1.39e-15!180;CL:0000183!3.10e-14!59;CL:0000680!1.05e-13!57;CL:0000056!1.05e-13!57;CL:0000355!1.05e-13!57;CL:0000071!4.58e-13!18;CL:0002546!4.58e-13!18;CL:0000187!1.29e-12!54;CL:0000359!2.01e-12!32;CL:0000192!2.72e-11!42;CL:0000514!2.72e-11!42;CL:0000076!3.31e-10!62;CL:1000449!6.07e-10!16;CL:0000393!1.20e-09!60;CL:0000211!1.20e-09!60;CL:1000497!2.14e-09!18;CL:0002518!2.14e-09!18;CL:0000057!2.10e-08!75;CL:0002681!3.60e-08!13;CL:0002584!3.60e-08!13;CL:0000548!2.34e-07!679;CL:0000004!2.34e-07!679;CL:0000255!2.34e-07!679;CL:1000507!2.51e-07!12;CL:1000494!2.51e-07!12;CL:1000413!3.32e-07!9;CL:0000012!7.69e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.11e-17;24!CL:0000115;6.92e-16;36!CL:0000071;2.47e-13;18!CL:0002078;1.20e-12;45!CL:0000359;5.98e-12;32!CL:0000213;8.98e-12;58!CL:0000215;8.98e-12;58!CL:1000449;8.33e-11;15!CL:1000497;3.76e-10;17!CL:0002518;3.76e-10;17!CL:0002681;5.54e-09;12!CL:0002584;5.54e-09;12!CL:0000192;2.77e-08;43!CL:1000507;2.06e-07;10!CL:1000494;2.06e-07;10!CL:1000413;2.45e-07;9!CL:0000187;3.15e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.39e-35,121;CL:0002321,1.20e-26,250;CL:0002078,1.57e-19,45;CL:0000213,4.79e-19,58;CL:0000215,4.79e-19,58;CL:0000115,5.24e-19,36;CL:0000066,1.07e-17,253;CL:0002139,2.17e-17,24;CL:0000680,8.86e-14,58;CL:0000056,8.86e-14,58;CL:0000355,8.86e-14,58;CL:0000071,2.52e-13,18;CL:0002546,2.52e-13,18;CL:0000187,1.13e-12,55;CL:0000359,1.14e-12,32;CL:0000192,3.15e-11,43;CL:0000514,3.15e-11,43;CL:1000449,8.62e-11,15;CL:0000076,3.14e-10,63;CL:1000497,4.00e-10,17;CL:0002518,4.00e-10,17;CL:0000393,1.04e-09,61;CL:0000211,1.04e-09,61;CL:0002681,5.66e-09,12;CL:0002584,5.66e-09,12;CL:0000057,1.68e-08,76;CL:1000507,2.12e-07,10;CL:1000494,2.12e-07,10;CL:1000413,2.47e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;2.47e-13;18!CL:0000222;1.72e-10;121!CL:0000514;2.77e-08;43!CL:0000355;1.50e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!6.91e-32!118;UBERON:0002049!1.40e-29!79;UBERON:0007798!1.40e-29!79;UBERON:0000483!9.38e-29!309;UBERON:0000119!2.04e-28!312;UBERON:0000055!3.35e-28!69;UBERON:0004872!3.32e-27!84;UBERON:0001981!1.04e-24!60;UBERON:0007500!1.04e-24!60;UBERON:0004537!1.04e-24!60;UBERON:0006965!1.04e-24!60;UBERON:0002100!2.24e-24!216;UBERON:0000490!2.23e-23!138;UBERON:0005256!4.35e-23!143;UBERON:0000477!2.23e-20!286;UBERON:0000475!2.59e-20!365;UBERON:0004111!4.79e-20!241;UBERON:0004535!8.49e-20!110;UBERON:0001009!8.56e-20!113;UBERON:0000481!1.91e-19!347;UBERON:0003104!5.61e-19!238;UBERON:0009142!5.61e-19!238;UBERON:0000486!1.31e-17!82;UBERON:0001637!1.82e-17!42;UBERON:0003509!1.82e-17!42;UBERON:0004572!1.82e-17!42;UBERON:0000025!5.35e-17!194;UBERON:0000914!1.14e-16!83;UBERON:0002329!1.14e-16!83;UBERON:0003077!1.14e-16!83;UBERON:0003059!1.14e-16!83;UBERON:0007282!1.14e-16!83;UBERON:0009618!1.14e-16!83;UBERON:0007285!1.14e-16!83;UBERON:0004290!1.83e-15!70;UBERON:0000468!3.81e-14!659;UBERON:0001134!5.63e-14!61;UBERON:0002036!5.63e-14!61;UBERON:0003082!5.63e-14!61;UBERON:0002385!1.69e-13!63;UBERON:0001015!1.69e-13!63;UBERON:0000383!1.69e-13!63;UBERON:0000487!1.98e-13!22;UBERON:0000467!2.82e-13!625;UBERON:0001986!4.58e-13!18;UBERON:0004638!4.58e-13!18;UBERON:0004852!4.58e-13!18;UBERON:0000480!5.31e-13!626;UBERON:0004573!9.74e-13!33;UBERON:0004571!9.74e-13!33;UBERON:0006914!2.38e-11!25;UBERON:0004211!6.07e-10!16;UBERON:0001285!6.07e-10!16;UBERON:0007684!6.07e-10!16;UBERON:0003220!6.07e-10!16;UBERON:0004208!6.07e-10!16;UBERON:0003103!1.14e-09!69;UBERON:0006555!1.63e-09!17;UBERON:0005103!1.63e-09!17;UBERON:0000083!1.63e-09!17;UBERON:0009201!1.63e-09!17;UBERON:0004819!1.63e-09!17;UBERON:0006553!1.63e-09!17;UBERON:0003074!1.63e-09!17;UBERON:0003060!1.63e-09!17;UBERON:0000058!1.83e-09!26;UBERON:0002050!3.06e-09!605;UBERON:0005423!3.06e-09!605;UBERON:0000923!4.15e-09!604;UBERON:0005291!4.15e-09!604;UBERON:0006598!4.15e-09!604;UBERON:0002532!4.15e-09!604;UBERON:0009569!5.23e-09!113;UBERON:0000353!5.73e-09!17;UBERON:0001048!9.68e-09!168;UBERON:0000080!9.96e-09!18;UBERON:0002120!9.96e-09!18;UBERON:0004875!9.96e-09!18;UBERON:0005721!9.96e-09!18;UBERON:0005754!9.96e-09!18;UBERON:0007297!9.96e-09!18;UBERON:0000926!1.19e-08!448;UBERON:0004120!1.19e-08!448;UBERON:0006603!1.19e-08!448;UBERON:0000922!1.26e-08!612;UBERON:0000466!1.51e-08!126;UBERON:0004876!2.16e-08!20;UBERON:0001225!3.60e-08!13;UBERON:0008987!3.60e-08!13;UBERON:0000947!4.31e-08!21;UBERON:0010191!4.31e-08!21;UBERON:0000464!4.41e-08!104;UBERON:0003887!4.82e-08!21;UBERON:0000064!1.74e-07!219;UBERON:0003064!1.80e-07!37;UBERON:0009773!2.51e-07!12;UBERON:0001231!2.51e-07!12;UBERON:0004810!2.51e-07!12;UBERON:0001851!2.81e-07!16;UBERON:0003915!3.32e-07!9;UBERON:0004700!3.32e-07!9;UBERON:0001917!3.32e-07!9;UBERON:0000915!7.63e-07!52 | |||
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|phase1_expression=12.717486548939,7.70761886007539,4.22863212287913,7.00513088471913,1.78784437770915,4.36169262050184,7.59899634504932,10.1075179748293,1.04474251279935,45.9522461257822,189.8019176885,8.08233076881637,12.9245819331942,7.79728023648294,2.98257638155124,41.6841590800101,45.8047841298222,50.3913962367288,52.2088094705842,7.63350560076085,21.0120711981581,4.70182082217132,2.86235987131057,9.71808418017478,5.39833350257652,0,0,0,0,0,0.619264493264304,25.74379428541,34.939886578277,30.3198288336766,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0,0.639337125799041,0,0.598390972864896,0.426224750532694,0,0,0,0.251248665256743,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4140171940727,15.4713699830672,3.2529523714611,8.02140657017423,7.24232594804119,4.7717156823066,1.94653948121054,7.09011128730509,13.747222642679,12.7360439255033,6.61444331263449,20.0362408560898,10.7527488407485,0,0,0.26591592103773,0,0,0.371457501329565,64.3990199868124,65.3778292280655,96.1579189453036,57.096102134325,163.604780121863,230.824037187717,123.725020189792,175.981812994313,150.133362853792,114.809170178282,301.719158514751,156.616053778014,332.900646495703,164.345396914603,256.004855530636,103.855583994385,99.4665120733932,95.044089527924,171.714633961789,139.542051956515,181.186524747173,0,0,12.210633459991,4.47274756525787,17.2217495863828,4.8991396900891,2.86836620748814,19.1520926387113,8.97084160227691,49.1045380356643,91.5136604627663,3.42332138939743,30.4446118877495,19.942352179842,0.756787138224657,0.576175924479999,12.8876787508588,29.6552072988804,21.6779292186891,6.27684458317565,16.2059608128396,23.1478310446428,19.6631129383148,10.0035543914898,11.9149287792415,3.51307655997603,3.56400857184616,10.6324779589779,13.6524204290704,25.8702531053846,13.1302168884172,14.138392745532,8.86605169549385,13.608306247306,12.5659996277598,16.8266625975388,39.5878319228473,4.30535125653269,12.813443329114,4.4505699243508,3.60109315301283,8.65641245602887,3.09168648054755,6.51408997160564,3.54430297706659,13.8360547328902,2.27190396819703,7.36399189138395,2.42469085228218,3.55009592516614,12.3925080819998,8.30846902321389,20.2923895821462,25.3653892149476,24.9519997988433,0.121973706129595,0,0.464775771478074,0.621966330092223,0,0,4.69348596989448,8.36213219650751,6.90674606762403,6.50115099244771,5.77503585335668,1.77460200059766,1.34867752062481,0.964044119533928,1.98529150918309,0.653638332277218,1.66089433377768,1.61797569792197,1.17732879075208,1.53898862778556,180.848086383039,179.509470468411,13.1703683626048,11.7606969108434,0,0.982827216677626,12.4065880403095,0,3.19769940212095,13.5538570135835,15.1455393863903,13.4882103909143,11.3597738825143,10.3699058577553,2.93227474779292,49.9168696934198,44.7427160278347,6.02838105870399,14.4412693910061,236.039142089356,207.417509634322,170.277466249965,6.3216351836742,0.858486162094873,0,0.702012795417713,0.148631162288728,27.1828118561653,13.2705881277099,17.5801120580559,6.71688920271362,10.1721878479887,16.8688378832693,0,0,0.207328115540772,0,0.12624243342638,2.28592419451809,4.58386110669933,0,15.3965201420435,4.62723717164956,0.901029173531752,0,3.7003257833969,0.87192013766656,3.5202377194056,24.1738108467044,28.6125156681506,46.49165139058,14.6265964121679,8.32059495290929,14.40361295868,15.6034045225606,18.3831303521109,1.42977993658148,2.17048642156577,18.9345277459577,45.2773296168292,1.06617584622764,27.71831555267,55.1634060019043,70.5942101466238,90.7754759933078,0,0,0,7.18874566474748,3.44585807502342,27.1010119577365,29.1010426401834,18.6983453520849,27.9335102654237,0,0,0,0,2.54094624222463,0,2.31986643833309,1.50764638800914,0,0,0,0,3.6807447515742,12.0040925054323,9.49427582949075,11.854339107256,7.13715955188647,6.15039418632345,7.84847480451178,3.00946099727719,9.09630016223939,11.3820378421755,9.29915837949611,7.74350507875153,3.12781012085098,6.2656370388077,9.60801586670397,0,0,0,8.18444442904901,29.9583791118895,21.772101119737,8.68377327365719,3.99001130548962,13.7523446272206,2.30650468660262,8.69902323413396,14.7985607452119,7.42090332224955,18.0425341749107,21.8400922135146,13.9616165223476,21.8086860257121,18.5936605535935,2.90062679019893,28.872931723673,6.62983120338454,5.85553685639494,6.3731908802351,3.54035920390445,69.033540774834,60.53405496407,133.339460760065,92.0677115315542,50.0314720952231,226.329434301084,192.886261783569,92.8438439239199,265.270874627298,70.1751273238579,102.846403640245,31.6046578575847,48.202408517866,77.9084146433181,0,0,6.15480300279334,20.9929373247812,5.20605431462885,5.66725564062472,0,0,19.5250282918699,20.1518676271322,8.03419649220798,23.5876552632778,10.6293545809105,9.3637241582939,26.4646219170299,9.23814105867153,5.65565106265491,18.8350846589583,10.861908348902,11.9005139059904,18.06586633232,4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| ||
|short_description=p3@S100A16 | |short_description=p3@S100A16 | ||
}} | }} |
Latest revision as of 06:23, 17 September 2015
Short description: | p3@S100A16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_S100A16_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_uc001fcc.2_5end |
EntrezGene: | S100A16 |
HGNC: | 20441 |
UniProt: | Q96FQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.39e-35 | 121 |
embryonic cell | 1.20e-26 | 250 |
meso-epithelial cell | 1.57e-19 | 45 |
lining cell | 4.79e-19 | 58 |
barrier cell | 4.79e-19 | 58 |
endothelial cell | 5.24e-19 | 36 |
epithelial cell | 1.07e-17 | 253 |
endothelial cell of vascular tree | 2.17e-17 | 24 |
muscle precursor cell | 8.86e-14 | 58 |
myoblast | 8.86e-14 | 58 |
multi-potent skeletal muscle stem cell | 8.86e-14 | 58 |
blood vessel endothelial cell | 2.52e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.52e-13 | 18 |
muscle cell | 1.13e-12 | 55 |
vascular associated smooth muscle cell | 1.14e-12 | 32 |
smooth muscle cell | 3.15e-11 | 43 |
smooth muscle myoblast | 3.15e-11 | 43 |
epithelial cell of nephron | 8.62e-11 | 15 |
squamous epithelial cell | 3.14e-10 | 63 |
kidney cell | 4.00e-10 | 17 |
kidney epithelial cell | 4.00e-10 | 17 |
electrically responsive cell | 1.04e-09 | 61 |
electrically active cell | 1.04e-09 | 61 |
kidney cortical cell | 5.66e-09 | 12 |
renal cortical epithelial cell | 5.66e-09 | 12 |
fibroblast | 1.68e-08 | 76 |
kidney tubule cell | 2.12e-07 | 10 |
nephron tubule epithelial cell | 2.12e-07 | 10 |
endothelial cell of artery | 2.47e-07 | 9 |