FFCP PHASE1:Hg19::chr16:67063142..67063153,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:67063142..67063153,+
|short_description=p4@CBFB
|description=CAGE_peak_4_at_CBFB_5end
|association_with_transcript=92bp_to_ENST00000290858,ENST00000412916...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=865 | |EntrezGene=865 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1539 | |HGNC=1539 | ||
|TSSclassifier=strong | |||
|UniProt=Q13951 | |UniProt=Q13951 | ||
|association_with_transcript=92bp_to_ENST00000290858,ENST00000412916,NM_001755,NM_022845,uc002era.2,uc002erb.2,uc010vja.1_5end | |||
|cluster_id=chr16:67063142..67063153,+ | |||
|description=CAGE_peak_4_at_CBFB_5end | |||
|id=chr16:67063142..67063153,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.39e-12!182;CL:0000037!6.84e-12!172;CL:0000566!6.84e-12!172;CL:0000134!4.70e-11!358;CL:0002320!7.57e-11!365;CL:0002032!1.03e-10!165;CL:0000837!1.03e-10!165;CL:0002031!1.77e-10!124;CL:0000219!2.00e-10!390;CL:0000738!3.32e-10!140;CL:0000048!2.37e-09!430;CL:0002087!3.58e-09!119;CL:0000723!7.35e-09!436;CL:0000034!1.32e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.51e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.76e-13,177;CL:0000037,1.47e-12,168;CL:0002032,1.46e-11,161;CL:0000837,1.46e-11,161;CL:0000738,1.64e-10,136;CL:0002031,3.02e-10,120;CL:0000134,7.25e-10,354;CL:0000048,1.01e-09,427;CL:0000219,1.98e-09,386;CL:0000034,2.38e-09,441;CL:0000723,3.87e-09,433;CL:0002320,3.99e-09,361;CL:0002087,1.98e-07,115;CL:0000763,2.40e-07,108;CL:0000049,2.40e-07,108;CL:0000084,2.41e-07,25;CL:0000827,2.41e-07,25;CL:0000557,5.54e-07,67;CL:0000097,7.41e-07,5;CL:0002028,7.41e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.54e-11!375;UBERON:0002390!8.03e-07!102;UBERON:0003061!8.03e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.19e-09,371;UBERON:0002390,1.30e-08,98;UBERON:0003061,1.30e-08,98;UBERON:0002371,3.59e-07,76;UBERON:0002193,8.82e-07,108 | |||
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| ||
|short_description=p4@CBFB | |||
}} | }} |
Latest revision as of 09:26, 17 September 2015
Short description: | p4@CBFB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CBFB_5end |
Coexpression cluster: | NA |
Association with transcript: | 92bp_to_ENST00000290858, ENST00000412916, NM_001755, NM_022845, uc002era.2, uc002erb.2, uc010vja.1_5end |
EntrezGene: | CBFB |
HGNC: | 1539 |
UniProt: | Q13951 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.76e-13 | 177 |
hematopoietic stem cell | 1.47e-12 | 168 |
hematopoietic oligopotent progenitor cell | 1.46e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.46e-11 | 161 |
leukocyte | 1.64e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 3.02e-10 | 120 |
mesenchymal cell | 7.25e-10 | 354 |
multi fate stem cell | 1.01e-09 | 427 |
motile cell | 1.98e-09 | 386 |
stem cell | 2.38e-09 | 441 |
somatic stem cell | 3.87e-09 | 433 |
connective tissue cell | 3.99e-09 | 361 |
nongranular leukocyte | 1.98e-07 | 115 |
myeloid cell | 2.40e-07 | 108 |
common myeloid progenitor | 2.40e-07 | 108 |
T cell | 2.41e-07 | 25 |
pro-T cell | 2.41e-07 | 25 |
granulocyte monocyte progenitor cell | 5.54e-07 | 67 |
mast cell | 7.41e-07 | 5 |
basophil mast progenitor cell | 7.41e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.19e-09 | 371 |
hematopoietic system | 1.30e-08 | 98 |
blood island | 1.30e-08 | 98 |
bone marrow | 3.59e-07 | 76 |
hemolymphoid system | 8.82e-07 | 108 |