FFCP PHASE1:Hg19::chr5:179234348..179234393,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11282 | |EntrezGene=11282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7048 | |HGNC=7048 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQ53 | |UniProt=Q9UQ53 | ||
|association_with_transcript=-396bp_to_ENST00000518168,NM_014275,uc003mks.2_5end | |association_with_transcript=-396bp_to_ENST00000518168,NM_014275,uc003mks.2_5end | ||
|cluster_id=chr5:179234348..179234393,- | |||
|description=CAGE_peak_8_at_MGAT4B_5end | |description=CAGE_peak_8_at_MGAT4B_5end | ||
|id=chr5:179234348..179234393,- | |id=chr5:179234348..179234393,- | ||
|ontology_enrichment_celltype=CL:0000766!2.26e-24!76;CL:0000557!9.13e-22!71;CL:0002057!1.07e-21!42;CL:0002009!1.60e-21!65;CL:0002194!2.98e-21!63;CL:0000576!2.98e-21!63;CL:0000040!2.98e-21!63;CL:0000559!2.98e-21!63;CL:0000860!1.29e-19!45;CL:0000839!3.12e-19!70;CL:0000144!2.17e-16!625;CL:0002371!2.70e-15!591;CL:0000012!9.90e-15!682;CL:0000548!1.62e-14!679;CL:0000004!1.62e-14!679;CL:0000255!1.62e-14!679;CL:0000763!2.89e-14!112;CL:0000049!2.89e-14!112;CL:0000063!9.49e-14!578;CL:0000213!1.68e-11!57;CL:0000215!1.68e-11!57;CL:0000003!3.94e-10!722;CL:0000115!9.44e-10!35;CL:0002139!2.09e-09!24;CL:0000048!3.01e-08!430;CL:0002078!4.05e-08!44;CL:0000222!6.24e-08!119;CL:0000034!1.38e-07!444;CL:0000723!1.76e-07!436;CL:0002393!4.20e-07!9;CL:0002397!4.20e-07!9;CL:0000134!7.91e-07!358 | |ontology_enrichment_celltype=CL:0000766!2.26e-24!76;CL:0000557!9.13e-22!71;CL:0002057!1.07e-21!42;CL:0002009!1.60e-21!65;CL:0002194!2.98e-21!63;CL:0000576!2.98e-21!63;CL:0000040!2.98e-21!63;CL:0000559!2.98e-21!63;CL:0000860!1.29e-19!45;CL:0000839!3.12e-19!70;CL:0000144!2.17e-16!625;CL:0002371!2.70e-15!591;CL:0000012!9.90e-15!682;CL:0000548!1.62e-14!679;CL:0000004!1.62e-14!679;CL:0000255!1.62e-14!679;CL:0000763!2.89e-14!112;CL:0000049!2.89e-14!112;CL:0000063!9.49e-14!578;CL:0000213!1.68e-11!57;CL:0000215!1.68e-11!57;CL:0000003!3.94e-10!722;CL:0000115!9.44e-10!35;CL:0002139!2.09e-09!24;CL:0000048!3.01e-08!430;CL:0002078!4.05e-08!44;CL:0000222!6.24e-08!119;CL:0000034!1.38e-07!444;CL:0000723!1.76e-07!436;CL:0002393!4.20e-07!9;CL:0002397!4.20e-07!9;CL:0000134!7.91e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.70e-17;33!CL:0002057;9.70e-17;33!CL:0000473;8.95e-16;39!CL:0000234;8.95e-16;39!CL:0000576;2.31e-15;48!CL:0000766;7.70e-14;69!CL:0002139;1.96e-10;24!CL:0000115;1.26e-08;36!CL:0000071;2.01e-07;18!CL:0002078;6.58e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.05e-30,72;CL:0000557,1.49e-27,67;CL:0000473,2.95e-27,48;CL:0000234,2.95e-27,48;CL:0002009,3.66e-27,61;CL:0002194,6.95e-27,59;CL:0000576,6.95e-27,59;CL:0000040,6.95e-27,59;CL:0000559,6.95e-27,59;CL:0000860,2.98e-25,42;CL:0002057,2.98e-25,42;CL:0000839,6.09e-25,66;CL:0000763,2.60e-17,108;CL:0000049,2.60e-17,108;CL:0000213,1.40e-12,58;CL:0000215,1.40e-12,58;CL:0000048,3.93e-12,427;CL:0000723,2.56e-11,433;CL:0000034,3.37e-11,441;CL:0000115,6.75e-11,36;CL:0002139,8.65e-11,24;CL:0000134,8.75e-11,354;CL:0002320,2.66e-10,361;CL:0000219,2.13e-09,386;CL:0002078,2.79e-09,45;CL:0002393,4.39e-08,9;CL:0002397,4.39e-08,9;CL:0000222,8.03e-08,121;CL:0000071,1.35e-07,18;CL:0002546,1.35e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;2.75e-18;42!CL:0002546;2.01e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!7.11e-21!86;UBERON:0003081!1.49e-20!216;UBERON:0002371!1.80e-19!80;UBERON:0004765!1.58e-17!101;UBERON:0001434!1.58e-17!101;UBERON:0002193!1.32e-15!112;UBERON:0002405!4.52e-15!115;UBERON:0002390!2.13e-14!102;UBERON:0003061!2.13e-14!102;UBERON:0000926!2.93e-13!448;UBERON:0004120!2.93e-13!448;UBERON:0006603!2.93e-13!448;UBERON:0002204!3.40e-13!167;UBERON:0000055!8.28e-07!69;UBERON:0002384!8.79e-07!375;UBERON:0000467!9.50e-07!625 | |ontology_enrichment_uberon=UBERON:0001474!7.11e-21!86;UBERON:0003081!1.49e-20!216;UBERON:0002371!1.80e-19!80;UBERON:0004765!1.58e-17!101;UBERON:0001434!1.58e-17!101;UBERON:0002193!1.32e-15!112;UBERON:0002405!4.52e-15!115;UBERON:0002390!2.13e-14!102;UBERON:0003061!2.13e-14!102;UBERON:0000926!2.93e-13!448;UBERON:0004120!2.93e-13!448;UBERON:0006603!2.93e-13!448;UBERON:0002204!3.40e-13!167;UBERON:0000055!8.28e-07!69;UBERON:0002384!8.79e-07!375;UBERON:0000467!9.50e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0000487;1.30e-07;22!UBERON:0006914;1.43e-07;25!UBERON:0004638;2.01e-07;18!UBERON:0001986;2.01e-07;18!UBERON:0004852;2.01e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,4.25e-25,82;UBERON:0002371,1.88e-23,76;UBERON:0003081,5.83e-22,203;UBERON:0002405,5.94e-21,93;UBERON:0004765,9.54e-21,90;UBERON:0002193,8.55e-20,108;UBERON:0001434,5.55e-18,100;UBERON:0002390,8.09e-18,98;UBERON:0003061,8.09e-18,98;UBERON:0000926,3.29e-16,315;UBERON:0004120,3.29e-16,315;UBERON:0006603,3.29e-16,315;UBERON:0002204,4.21e-13,167;UBERON:0002384,1.18e-10,371;UBERON:0000487,9.91e-08,22;UBERON:0006914,1.31e-07,25;UBERON:0004638,1.35e-07,18;UBERON:0001986,1.35e-07,18;UBERON:0004852,1.35e-07,18 | |||
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| ||
|short_description=p8@MGAT4B | |short_description=p8@MGAT4B | ||
}} | }} |
Latest revision as of 09:32, 17 September 2015
Short description: | p8@MGAT4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MGAT4B_5end |
Coexpression cluster: | NA |
Association with transcript: | -396bp_to_ENST00000518168, NM_014275, uc003mks.2_5end |
EntrezGene: | MGAT4B |
HGNC: | 7048 |
UniProt: | Q9UQ53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.05e-30 | 72 |
granulocyte monocyte progenitor cell | 1.49e-27 | 67 |
defensive cell | 2.95e-27 | 48 |
phagocyte | 2.95e-27 | 48 |
macrophage dendritic cell progenitor | 3.66e-27 | 61 |
monopoietic cell | 6.95e-27 | 59 |
monocyte | 6.95e-27 | 59 |
monoblast | 6.95e-27 | 59 |
promonocyte | 6.95e-27 | 59 |
classical monocyte | 2.98e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.98e-25 | 42 |
myeloid lineage restricted progenitor cell | 6.09e-25 | 66 |
myeloid cell | 2.60e-17 | 108 |
common myeloid progenitor | 2.60e-17 | 108 |
lining cell | 1.40e-12 | 58 |
barrier cell | 1.40e-12 | 58 |
multi fate stem cell | 3.93e-12 | 427 |
somatic stem cell | 2.56e-11 | 433 |
stem cell | 3.37e-11 | 441 |
endothelial cell | 6.75e-11 | 36 |
endothelial cell of vascular tree | 8.65e-11 | 24 |
mesenchymal cell | 8.75e-11 | 354 |
connective tissue cell | 2.66e-10 | 361 |
motile cell | 2.13e-09 | 386 |
meso-epithelial cell | 2.79e-09 | 45 |
intermediate monocyte | 4.39e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.39e-08 | 9 |
mesodermal cell | 8.03e-08 | 121 |
blood vessel endothelial cell | 1.35e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.35e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
bone element | 4.25e-25 | 82 |
bone marrow | 1.88e-23 | 76 |
lateral plate mesoderm | 5.83e-22 | 203 |
immune system | 5.94e-21 | 93 |
skeletal element | 9.54e-21 | 90 |
hemolymphoid system | 8.55e-20 | 108 |
skeletal system | 5.55e-18 | 100 |
hematopoietic system | 8.09e-18 | 98 |
blood island | 8.09e-18 | 98 |
mesoderm | 3.29e-16 | 315 |
mesoderm-derived structure | 3.29e-16 | 315 |
presumptive mesoderm | 3.29e-16 | 315 |
musculoskeletal system | 4.21e-13 | 167 |
connective tissue | 1.18e-10 | 371 |
simple squamous epithelium | 9.91e-08 | 22 |
squamous epithelium | 1.31e-07 | 25 |
blood vessel endothelium | 1.35e-07 | 18 |
endothelium | 1.35e-07 | 18 |
cardiovascular system endothelium | 1.35e-07 | 18 |