FFCP PHASE1:Hg19::chr20:60813597..60813627,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9885 | |EntrezGene=9885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15761 | |HGNC=15761 | ||
|TSSclassifier=strong | |||
|UniProt=F8W926 | |UniProt=F8W926 | ||
|association_with_transcript=-9bp_to_ENST00000253000_5end | |association_with_transcript=-9bp_to_ENST00000253000_5end | ||
|cluster_id=chr20:60813597..60813627,+ | |||
|description=CAGE_peak_1_at_OSBPL2_5end | |description=CAGE_peak_1_at_OSBPL2_5end | ||
|id=chr20:60813597..60813627,+ | |id=chr20:60813597..60813627,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.74e-13!254;CL:0000223!4.63e-12!59;CL:0002076!2.70e-09!43 | |ontology_enrichment_celltype=CL:0000066!1.74e-13!254;CL:0000223!4.63e-12!59;CL:0002076!2.70e-09!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.75e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.89e-14,253;CL:0000223,6.22e-13,58;CL:0002076,3.50e-10,42 | |||
|ontology_enrichment_development_v019=CL:0000223;1.05e-07;58 | |||
|ontology_enrichment_disease=DOID:305!9.66e-16!106;DOID:0050687!5.81e-12!143;DOID:299!4.82e-08!25;DOID:1749!3.05e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;5.75e-08;25!DOID:1749;3.77e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.66e-16,106;DOID:0050687,5.81e-12,143;DOID:299,4.82e-08,25;DOID:1749,3.05e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.57e-24!115;UBERON:0004119!1.66e-11!169;UBERON:0000925!1.66e-11!169;UBERON:0006595!1.66e-11!169;UBERON:0004921!1.49e-09!129;UBERON:0004185!1.49e-09!129;UBERON:0001049!1.84e-09!57;UBERON:0005068!1.84e-09!57;UBERON:0006241!1.84e-09!57;UBERON:0007135!1.84e-09!57;UBERON:0001007!5.00e-09!155;UBERON:0001555!5.00e-09!155;UBERON:0007026!5.00e-09!155;UBERON:0005911!8.67e-09!82;UBERON:0000077!2.96e-08!130;UBERON:0005177!3.72e-08!107;UBERON:0001041!7.58e-08!98;UBERON:0000475!8.00e-08!365;UBERON:0000955!8.61e-08!69;UBERON:0006238!8.61e-08!69;UBERON:0002616!1.05e-07!59;UBERON:0004111!1.12e-07!241;UBERON:0000466!2.14e-07!126;UBERON:0000153!2.44e-07!129;UBERON:0007811!2.44e-07!129;UBERON:0002530!2.46e-07!59;UBERON:0003075!2.60e-07!86;UBERON:0007284!2.60e-07!86;UBERON:0000481!2.85e-07!347;UBERON:0001017!4.50e-07!82;UBERON:0000033!4.60e-07!123;UBERON:0005743!4.98e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!2.57e-24!115;UBERON:0004119!1.66e-11!169;UBERON:0000925!1.66e-11!169;UBERON:0006595!1.66e-11!169;UBERON:0004921!1.49e-09!129;UBERON:0004185!1.49e-09!129;UBERON:0001049!1.84e-09!57;UBERON:0005068!1.84e-09!57;UBERON:0006241!1.84e-09!57;UBERON:0007135!1.84e-09!57;UBERON:0001007!5.00e-09!155;UBERON:0001555!5.00e-09!155;UBERON:0007026!5.00e-09!155;UBERON:0005911!8.67e-09!82;UBERON:0000077!2.96e-08!130;UBERON:0005177!3.72e-08!107;UBERON:0001041!7.58e-08!98;UBERON:0000475!8.00e-08!365;UBERON:0000955!8.61e-08!69;UBERON:0006238!8.61e-08!69;UBERON:0002616!1.05e-07!59;UBERON:0004111!1.12e-07!241;UBERON:0000466!2.14e-07!126;UBERON:0000153!2.44e-07!129;UBERON:0007811!2.44e-07!129;UBERON:0002530!2.46e-07!59;UBERON:0003075!2.60e-07!86;UBERON:0007284!2.60e-07!86;UBERON:0000481!2.85e-07!347;UBERON:0001017!4.50e-07!82;UBERON:0000033!4.60e-07!123;UBERON:0005743!4.98e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.12e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.77e-24,114;UBERON:0011216,1.24e-11,223;UBERON:0004119,3.53e-10,160;UBERON:0000925,3.53e-10,160;UBERON:0006595,3.53e-10,160;UBERON:0001049,1.54e-09,56;UBERON:0005068,1.54e-09,56;UBERON:0006241,1.54e-09,56;UBERON:0007135,1.54e-09,56;UBERON:0000073,7.67e-09,53;UBERON:0002616,7.67e-09,53;UBERON:0004921,8.51e-09,118;UBERON:0005911,8.67e-09,82;UBERON:0005177,8.69e-09,101;UBERON:0001007,3.48e-08,145;UBERON:0001555,3.48e-08,145;UBERON:0007026,3.48e-08,145;UBERON:0010371,3.81e-08,104;UBERON:0004111,6.52e-08,240;UBERON:0000955,7.85e-08,68;UBERON:0006238,7.85e-08,68;UBERON:0002530,2.46e-07,59;UBERON:0001041,3.86e-07,87;UBERON:0001017,4.26e-07,81 | |||
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| ||
|short_description=p1@OSBPL2 | |short_description=p1@OSBPL2 | ||
}} | }} |
Latest revision as of 10:14, 17 September 2015
Short description: | p1@OSBPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OSBPL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000253000_5end |
EntrezGene: | OSBPL2 |
HGNC: | 15761 |
UniProt: | F8W926 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.89e-14 | 253 |
endodermal cell | 6.22e-13 | 58 |
endo-epithelial cell | 3.50e-10 | 42 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.77e-24 | 114 |
organ system subdivision | 1.24e-11 | 223 |
endoderm-derived structure | 3.53e-10 | 160 |
endoderm | 3.53e-10 | 160 |
presumptive endoderm | 3.53e-10 | 160 |
neural tube | 1.54e-09 | 56 |
neural rod | 1.54e-09 | 56 |
future spinal cord | 1.54e-09 | 56 |
neural keel | 1.54e-09 | 56 |
regional part of nervous system | 7.67e-09 | 53 |
regional part of brain | 7.67e-09 | 53 |
subdivision of digestive tract | 8.51e-09 | 118 |
endo-epithelium | 8.67e-09 | 82 |
trunk region element | 8.69e-09 | 101 |
digestive system | 3.48e-08 | 145 |
digestive tract | 3.48e-08 | 145 |
primitive gut | 3.48e-08 | 145 |
ecto-epithelium | 3.81e-08 | 104 |
anatomical conduit | 6.52e-08 | 240 |
brain | 7.85e-08 | 68 |
future brain | 7.85e-08 | 68 |
gland | 2.46e-07 | 59 |
foregut | 3.86e-07 | 87 |
central nervous system | 4.26e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.66e-16 | 106 |
cell type cancer | 5.81e-12 | 143 |
adenocarcinoma | 4.82e-08 | 25 |
squamous cell carcinoma | 3.05e-07 | 14 |