FFCP PHASE1:Hg19::chr20:62168672..62168713,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:62168672..62168713,-
|short_description=p1@PTK6
|description=CAGE_peak_1_at_PTK6_5end
|association_with_transcript=0bp_to_ENST00000217185,NM_005975,uc002y...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5753 | |EntrezGene=5753 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9617 | |HGNC=9617 | ||
|TSSclassifier=strong | |||
|UniProt=Q13882 | |UniProt=Q13882 | ||
|association_with_transcript=0bp_to_ENST00000217185,NM_005975,uc002yfg.2,uc011aay.1,uc011aba.1_5end | |||
|cluster_id=chr20:62168672..62168713,- | |||
|description=CAGE_peak_1_at_PTK6_5end | |||
|id=chr20:62168672..62168713,- | |||
|ontology_enrichment_celltype=CL:0000066!6.23e-16!254;CL:0002076!1.88e-14!43;CL:0000223!2.53e-11!59;CL:0002368!3.98e-10!13;CL:0000557!1.72e-09!71;CL:0000839!3.21e-08!70;CL:0000766!7.18e-08!76;CL:0002009!1.69e-07!65;CL:0002251!1.99e-07!21;CL:0002159!2.33e-07!13;CL:0000990!3.14e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.83e-16;13!CL:0002076;5.58e-13;42!CL:0002202;3.55e-10;9!CL:0002632;3.55e-10;9!CL:0000244;1.31e-08;4!CL:0000731;1.31e-08;4!CL:0000082;2.62e-07;19!CL:0002328;4.67e-07;3!CL:0002251;5.33e-07;20!CL:0000307;9.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.88e-22,253;CL:0002076,8.56e-17,42;CL:0002368,3.30e-16,13;CL:0000223,6.78e-15,58;CL:0002202,3.61e-10,9;CL:0002632,3.61e-10,9;CL:0000244,1.31e-08,4;CL:0000731,1.31e-08,4;CL:0000082,2.18e-07,19;CL:0002328,4.69e-07,3;CL:0002251,5.87e-07,20;CL:0000068,9.44e-07,3;CL:0000069,9.44e-07,3;CL:0000307,9.44e-07,3;CL:0000377,9.44e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.85e-15;29!UBERON:0006595;7.58e-11;86!CL:0000223;1.93e-08;58!CL:0000377;9.42e-07;3 | |||
|ontology_enrichment_disease=DOID:305!1.11e-17!106;DOID:0050687!5.15e-10!143;DOID:1749!6.09e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.47e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.52e-22,106;DOID:0050687,1.03e-13,143;DOID:1749,1.08e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.80e-27!169;UBERON:0000925!2.80e-27!169;UBERON:0006595!2.80e-27!169;UBERON:0001007!3.05e-22!155;UBERON:0001555!3.05e-22!155;UBERON:0007026!3.05e-22!155;UBERON:0004921!5.85e-21!129;UBERON:0004185!5.85e-21!129;UBERON:0001004!7.03e-20!72;UBERON:0000065!2.61e-18!53;UBERON:0000077!1.11e-17!130;UBERON:0001041!4.02e-16!98;UBERON:0008947!4.52e-15!38;UBERON:0003258!4.52e-15!38;UBERON:0000072!1.43e-14!46;UBERON:0005178!9.97e-09!34;UBERON:0002224!9.97e-09!34;UBERON:0000161!1.00e-08!35;UBERON:0001737!1.33e-08!9;UBERON:0000062!2.05e-08!511;UBERON:0005181!2.74e-08!35;UBERON:0001557!3.35e-08!19;UBERON:0005911!4.50e-08!82;UBERON:0005153!1.99e-07!37;UBERON:0002371!2.93e-07!80;UBERON:0000166!5.18e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;2.39e-18;44!UBERON:0000072;5.09e-17;37!UBERON:0001004;2.45e-13;65!UBERON:0001737;8.42e-13;9!UBERON:0001557;8.42e-13;9!UBERON:0004807;7.43e-11;22!UBERON:0004921;1.84e-10;33!UBERON:0005178;5.77e-10;34!UBERON:0002224;5.77e-10;34!UBERON:0005911;6.63e-10;36!UBERON:0005181;6.15e-09;35!UBERON:0007196;8.52e-09;15!UBERON:0001558;8.52e-09;15!UBERON:0005409;1.09e-08;22!UBERON:0002294;2.11e-08;7!UBERON:0001173;2.11e-08;7!UBERON:0001555;4.78e-08;54!UBERON:0000161;2.50e-07;19!UBERON:0000166;2.50e-07;19!UBERON:0004802;2.62e-07;19!UBERON:0000115;2.62e-07;19!UBERON:0000486;3.05e-07;12!UBERON:0002048;3.23e-07;22!UBERON:0000117;3.23e-07;22!UBERON:0000171;3.23e-07;22!UBERON:0000170;3.23e-07;22!UBERON:0004815;4.67e-07;3!UBERON:0002031;4.67e-07;3!UBERON:0000365;7.84e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.78e-36,160;UBERON:0000925,7.78e-36,160;UBERON:0006595,7.78e-36,160;UBERON:0001007,1.52e-29,145;UBERON:0001555,1.52e-29,145;UBERON:0007026,1.52e-29,145;UBERON:0004921,3.01e-28,118;UBERON:0001004,5.31e-28,74;UBERON:0000065,3.88e-26,54;UBERON:0000072,1.96e-21,47;UBERON:0008947,2.52e-21,38;UBERON:0003258,2.52e-21,38;UBERON:0001041,2.23e-20,87;UBERON:0001737,4.80e-13,9;UBERON:0001557,2.93e-12,19;UBERON:0005178,6.57e-11,34;UBERON:0002224,6.57e-11,34;UBERON:0000161,1.12e-10,36;UBERON:0005911,1.58e-10,82;UBERON:0005181,1.82e-10,35;UBERON:0000166,5.02e-09,22;UBERON:0007196,8.94e-09,15;UBERON:0001558,8.94e-09,15;UBERON:0011216,2.45e-08,223;UBERON:0004807,6.99e-08,28;UBERON:0005153,1.19e-07,37;UBERON:0000915,2.17e-07,52;UBERON:0004802,2.18e-07,19;UBERON:0000115,2.18e-07,19;UBERON:0005409,2.37e-07,25;UBERON:0002048,2.84e-07,22;UBERON:0000117,2.84e-07,22;UBERON:0000171,2.84e-07,22;UBERON:0000170,2.84e-07,22;UBERON:0005597,2.84e-07,22;UBERON:0000118,2.84e-07,22;UBERON:0005157,3.00e-07,47;UBERON:0004815,4.69e-07,3;UBERON:0002031,4.69e-07,3;UBERON:0000365,7.86e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.767658796194425,0.154816123316076,17.4690032650996,13.5542663450213,25.5130267015083,0,0,0,1.10799081706375,0.200544447470142,0.217010870715852,0.895661896959697,0.32389366601898,0,0.436194716338694,0.377875943688809,0.242584061187816,0,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0,0.211255286311942,0.425208599930087,0.419317291016752,0.561643155732475,0.600707571366025,0.32145117339416,0.855038231223746,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,22.2220125858451,22.2470665670658,1.62273696827342,1.21890816109487,0.930705723632056,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,14.1080422809207,4.09119180886252,9.17774705244812,0,0,0,0,0,0,0,0,0,0,0,3.31259040111563,2.86593973132773,1.68707720918437,2.31617342738027,1.96091499683166,2.60997681022206,3.91010793664477,1.37355025587742,2.30848294167834,0,0,0,0,1.26755034821831,0,0,0,1.10689594688802,0,16.133291955068,20.2323155863715,11.8624187445724,0.370353780634118,0,0,0,0,0,0,0,0,0,4.29243081047436,1.47730203652438,0.936017060556951,1.48631162288728,0.93733833986777,0.671928512795438,0.567100388969546,0.0895585227028483,0,0.383382679165211,0.985326475791887,1.14462964217194,2.28060927094849,1.44119953416961,3.66103056936502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,1.65745780084613,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,5.16838984196555,11.0510241826209,0,0,0,0,0,0,0,0,0,6.94196644516108,9.4173133008902,3.95599408733211,6.77757131732185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1617650761594,16.7575568883947,8.71127878890581,0.188287601553558,8.6101074534246,20.2165770801151,23.0583679839071,9.6483828086923,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0.447352215784832,0,0.19538809540204,0,0,0,0,0,8.98274593959455,0.146508179271894,0,0.334330152832435,0,0.23874448473769,0,0.614321404198464,0,0,0,0,0,0.796991953004279,4.42054264849836,0,0,0,0,6.38065293146021,1.25314822272926,0.511572370226872,2.56472854656027,0,0,0,0,0,0.260427761085233,3.14855999986305,0,15.020735173686,3.55955110409873,8.74634422541365,0,0,0,0,0,0,0,0,0,1.52513848926586,0.975966209950223,4.84786628573922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,22.8910244148056,11.6763985144408,4.888241159469,0,0,0,0.067401132980677,0,0,0,3.7176277597097,1.45668227720456,0,1.20990716048664,0,0,0,0,0.664653872707185,0.330991955875499,0,0,0.284609546029793,0,0,10.7791637155815,1.65412492502765,0,1.89184635718778,3.67674058898524,3.21592995179216,4.92692742319255,32.2003534741552,0,2.03382666702479,0,0,0,3.32437350649165,1.52301758477914,8.96502577905281,0.39961921916426,4.32271251462318,0,0,4.03353434366819,0.99402028452346,4.24249262310232,0.407712618220842,0.941425616810999,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.349843349309,6.96421759102155,0,0,0.394028536495991,0.209818352539992,1.5840050477911,1.43429871466276,3.83830394638891,0,0,0.25426853765475,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0.855434189421647,3.52407511158336,0.640724475406168,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.97894681802587,0,0,0,0.530067437837643,0.192914038270915,0,0,0,0,0,0.584580926518165,0.930053882193542,1.14495775979091,0,0.737318726261158,23.0330214460903,0,0,0,0,0,20.0027696038806,6.8428498603627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.18330626556461,0.11796972334774,1.65085738669511,6.00733463981759,0,0,0,0,0,0.781514011233092,0,0.327543835020193,6.2099556211159,0,0,0,0,0,1.09651553371436,2.97726707033577,0,3.83287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,1.06374456795571,4.11556187000656,0.863424021355654,0,1.68163297988273,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,2.58136415292167,0,0,0,0.68732060563215,0,0,0,15.4095866775931,3.90137359943262,0,0,0,2.91426595835484,0,0,0,0,0,0,15.5891799378048,0,0,0.735444965261716,0,0,0,0,0,0,0,0.0999411559249289,0.71421575442263,9.17526666460799,1.68506870047253,5.84269110597214,2.2936464170227,0,0,0,0,2.1161073620616,0,0,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| ||
|short_description=p1@PTK6 | |||
}} | }} |
Latest revision as of 13:27, 17 September 2015
Short description: | p1@PTK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTK6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000217185, NM_005975, uc002yfg.2, uc011aay.1, uc011aba.1_5end |
EntrezGene: | PTK6 |
HGNC: | 9617 |
UniProt: | Q13882 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.88e-22 | 253 |
endo-epithelial cell | 8.56e-17 | 42 |
respiratory epithelial cell | 3.30e-16 | 13 |
endodermal cell | 6.78e-15 | 58 |
epithelial cell of tracheobronchial tree | 3.61e-10 | 9 |
epithelial cell of lower respiratory tract | 3.61e-10 | 9 |
transitional epithelial cell | 1.31e-08 | 4 |
urothelial cell | 1.31e-08 | 4 |
epithelial cell of lung | 2.18e-07 | 19 |
bronchial epithelial cell | 4.69e-07 | 3 |
epithelial cell of alimentary canal | 5.87e-07 | 20 |
duct epithelial cell | 9.44e-07 | 3 |
branched duct epithelial cell | 9.44e-07 | 3 |
tracheal epithelial cell | 9.44e-07 | 3 |
tracheoblast | 9.44e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.52e-22 | 106 |
cell type cancer | 1.03e-13 | 143 |
squamous cell carcinoma | 1.08e-10 | 14 |