FFCP PHASE1:Hg19::chr19:36389839..36389857,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:36389839..36389857,- to FFCP PHASE1:Hg19::chr19:36389839..36389857,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84807 | |EntrezGene=84807 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=15671 | |HGNC=15671 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK126825_5end | |||
|cluster_id=chr19:36389839..36389857,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_4_at_NFKBID_5end | |||
|id=chr19:36389839..36389857,- | |||
|ontology_enrichment_celltype=CL:0002057!1.42e-37!42;CL:0000766!1.91e-34!76;CL:0000860!7.42e-34!45;CL:0000557!1.36e-31!71;CL:0002009!1.69e-29!65;CL:0000839!4.72e-29!70;CL:0000738!1.45e-28!140;CL:0002194!1.10e-27!63;CL:0000576!1.10e-27!63;CL:0000040!1.10e-27!63;CL:0000559!1.10e-27!63;CL:0002031!3.54e-22!124;CL:0000763!1.17e-21!112;CL:0000049!1.17e-21!112;CL:0000037!7.22e-21!172;CL:0000566!7.22e-21!172;CL:0002087!1.13e-20!119;CL:0000988!9.25e-19!182;CL:0002032!1.05e-18!165;CL:0000837!1.05e-18!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.63e-87;33!CL:0002057;7.63e-87;33!CL:0000473;8.54e-60;39!CL:0000234;8.54e-60;39!CL:0000576;1.68e-46;48!CL:0000766;8.60e-36;69!CL:0000763;1.77e-15;100!CL:0000775;8.31e-13;3!CL:0002087;3.23e-12;104!CL:0000738;1.11e-11;136!CL:0000097;2.01e-11;5!CL:0000094;2.93e-08;8!CL:0001014;2.96e-08;2!CL:0001016;2.96e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.85e-84,42;CL:0002057,9.85e-84,42;CL:0000766,2.60e-73,72;CL:0000473,3.10e-72,48;CL:0000234,3.10e-72,48;CL:0000557,3.38e-70,67;CL:0000839,1.50e-63,66;CL:0002009,1.47e-61,61;CL:0002194,3.86e-56,59;CL:0000576,3.86e-56,59;CL:0000040,3.86e-56,59;CL:0000559,3.86e-56,59;CL:0000763,3.13e-51,108;CL:0000049,3.13e-51,108;CL:0000738,5.35e-43,136;CL:0002031,1.76e-37,120;CL:0002032,5.73e-33,161;CL:0000837,5.73e-33,161;CL:0000037,6.33e-33,168;CL:0000988,9.61e-31,177;CL:0002087,9.03e-29,115;CL:0000775,7.85e-13,3;CL:0000097,1.20e-11,5;CL:0002028,1.20e-11,5;CL:0000134,4.13e-11,354;CL:0002320,1.07e-10,361;CL:0000219,2.98e-09,386;CL:0000094,2.85e-08,8;CL:0001014,3.02e-08,2;CL:0001016,3.02e-08,2;CL:0000048,1.71e-07,427;CL:0000723,2.99e-07,433;CL:0000034,6.12e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-62;42!CL:0000049;3.07e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.35e-33!102;UBERON:0003061!6.35e-33!102;UBERON:0002193!1.62e-29!112;UBERON:0002371!3.66e-28!80;UBERON:0001474!5.42e-26!86;UBERON:0004765!9.06e-20!101;UBERON:0001434!9.06e-20!101;UBERON:0002405!2.00e-18!115;UBERON:0003081!1.83e-11!216;UBERON:0007023!1.01e-10!115;UBERON:0002204!6.43e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.64e-61,76;UBERON:0002390,2.09e-59,98;UBERON:0003061,2.09e-59,98;UBERON:0001474,6.39e-59,82;UBERON:0002193,4.89e-53,108;UBERON:0004765,6.57e-53,90;UBERON:0002405,3.33e-48,93;UBERON:0001434,9.85e-47,100;UBERON:0002204,2.00e-27,167;UBERON:0003081,4.96e-25,203;UBERON:0000926,2.36e-14,315;UBERON:0004120,2.36e-14,315;UBERON:0006603,2.36e-14,315;UBERON:0002384,3.88e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.383829398097213,0.619264493264304,0,0.30120591877825,0,0,0,0.880801318004542,2.76997704265939,0.802177789880567,2.60413044859022,0.223915474239924,0,0.515151135268373,2.4717700592526,1.51150377475524,3.39617685662943,7.43772918098191,9.45686142450199,14.2464930611748,9.78154133895312,11.0149103807513,6.3850202069918,17.9267753983042,14.2006630388442,29.7938270507552,5.64727018627814,6.27684145133045,5.61808711112712,13.1616073719488,10.269728866435,12.7867425159808,2.96866170168044,1.39624560335142,1.27867425159808,6.38460324982885,4.53908179752912,9.34233373493363,10.0499466102697,6.25779502104242,6.5156653411535,3.02699751316684,5.89244217580104,4.43047342417238,0.633765858935825,0.425208599930087,0.628975936525128,0.786300418025466,0.600707571366025,0.64290234678832,0,0.59675003159727,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,0,0.167186495390678,0,0,0,1.44833593950726,0,0,0.270803863765016,0.896639238079726,0.260118695119756,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.339928028092699,0,0,0.253019692019503,0,1.30216690771284,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0.821127996921047,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0.348259474598534,0.531831842075461,0.476981248610684,0.571994910780128,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,27.6738876615733,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.427114777637135,0,0.900273288253207,0,0,0,0.168776332241266,0,0.757301322732344,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.594524649154913,0,0,0,0,0,0,8.37527504423104,1.67292024625129,1.4512968087854,0,1.64115163454294,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0.197030760201927,0.431255149719035,0.77005821767849,0,0,0,0,0,17.9761685747324,14.9580729602012,20.7207756718018,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0.647142602455851,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0.569647187174163,0.238231775457789,1.23408681925858,3.24236655596359,3.24018862342869,0.79312517629427,0,0,0,0.743212700502875,0,0,0,0,0,0.846694330895531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.67401132980677,1.60515529459758,0,0.182454789215666,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,2.92466059016951,5.41661368190565,0.121499113316049,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0,0,1.19730191562487,0.164185041498678,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0.320362237703084,0.314408610199332,0.828478110694391,0,0,0,0,0.544017803369474,0,0.306345576763462,0.327872630709804,0,0,0,0.1251909307065,1.14681839138014,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,1.05802783107205,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0.19024743058172,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0.230467975111559,0,0.40781839786099,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0.193373663920732,0.199882311849858,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.426467963801962,0.23806443146374,0.322944549180031,0.620747142958579,0,0.12729431655633,0.404234377916439,0.653150243690884,0.342233301085281,0.134704106029175,0.286888821570705,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0,0.665756774185513,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.383829398097213,0.619264493264304,0,0.30120591877825,0,0,0,0.880801318004542,2.76997704265939,0.802177789880567,2.60413044859022,0.223915474239924,0,0.515151135268373,2.4717700592526,1.51150377475524,3.39617685662943,7.43772918098191,9.45686142450199,14.2464930611748,9.78154133895312,11.0149103807513,6.3850202069918,17.9267753983042,14.2006630388442,29.7938270507552,5.64727018627814,6.27684145133045,5.61808711112712,13.1616073719488,10.269728866435,12.7867425159808,2.96866170168044,1.39624560335142,1.27867425159808,6.38460324982885,4.53908179752912,9.34233373493363,10.0499466102697,6.25779502104242,6.5156653411535,3.02699751316684,5.89244217580104,4.43047342417238,0.633765858935825,0.425208599930087,0.628975936525128,0.786300418025466,0.600707571366025,0.64290234678832,0,0.59675003159727,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,0,0.167186495390678,0,0,0,1.44833593950726,0,0,0.270803863765016,0.896639238079726,0.260118695119756,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.339928028092699,0,0,0.253019692019503,0,1.30216690771284,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0.821127996921047,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0.348259474598534,0.531831842075461,0.476981248610684,0.571994910780128,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,27.6738876615733,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.427114777637135,0,0.900273288253207,0,0,0,0.168776332241266,0,0.757301322732344,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.594524649154913,0,0,0,0,0,0,8.37527504423104,1.67292024625129,1.4512968087854,0,1.64115163454294,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0.197030760201927,0.431255149719035,0.77005821767849,0,0,0,0,0,17.9761685747324,14.9580729602012,20.7207756718018,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0.647142602455851,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0.569647187174163,0.238231775457789,1.23408681925858,3.24236655596359,3.24018862342869,0.79312517629427,0,0,0,0.743212700502875,0,0,0,0,0,0.846694330895531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.67401132980677,1.60515529459758,0,0.182454789215666,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,2.92466059016951,5.41661368190565,0.121499113316049,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0,0,1.19730191562487,0.164185041498678,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0.320362237703084,0.314408610199332,0.828478110694391,0,0,0,0,0.544017803369474,0,0.306345576763462,0.327872630709804,0,0,0,0.1251909307065,1.14681839138014,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,1.05802783107205,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0.19024743058172,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0.230467975111559,0,0.40781839786099,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0.193373663920732,0.199882311849858,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.426467963801962,0.23806443146374,0.322944549180031,0.620747142958579,0,0.12729431655633,0.404234377916439,0.653150243690884,0.342233301085281,0.134704106029175,0.286888821570705,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0,0.665756774185513,1.00636896795513,0 | ||
|short_description=p4@NFKBID | |||
}} | }} |
Latest revision as of 14:20, 17 September 2015
Short description: | p4@NFKBID |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NFKBID_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_AK126825_5end |
EntrezGene: | NFKBID |
HGNC: | 15671 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.64e-61 | 76 |
hematopoietic system | 2.09e-59 | 98 |
blood island | 2.09e-59 | 98 |
bone element | 6.39e-59 | 82 |
hemolymphoid system | 4.89e-53 | 108 |
skeletal element | 6.57e-53 | 90 |
immune system | 3.33e-48 | 93 |
skeletal system | 9.85e-47 | 100 |
musculoskeletal system | 2.00e-27 | 167 |
lateral plate mesoderm | 4.96e-25 | 203 |
mesoderm | 2.36e-14 | 315 |
mesoderm-derived structure | 2.36e-14 | 315 |
presumptive mesoderm | 2.36e-14 | 315 |
connective tissue | 3.88e-10 | 371 |