FFCP PHASE1:Hg19::chr4:38869393..38869404,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:38869393..38869404,+ to FFCP PHASE1:Hg19::chr4:38869393..38869404,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92689 | |EntrezGene=92689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25087 | |HGNC=25087 | ||
|TSSclassifier=strong | |||
|UniProt=Q6MZV4 | |UniProt=Q6MZV4 | ||
|association_with_transcript=21bp_to_ENST00000515037_5end | |||
|cluster_id=chr4:38869393..38869404,+ | |||
|coexpression_cluster_id=C938 | |||
|description=CAGE_peak_2_at_FAM114A1_5end | |||
|id=chr4:38869393..38869404,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.23e-31!180;CL:0000057!3.79e-19!75;CL:0000680!1.04e-15!57;CL:0000056!1.04e-15!57;CL:0000355!1.04e-15!57;CL:0000222!7.46e-15!119;CL:0000183!8.31e-15!59;CL:0000187!9.65e-15!54;CL:0000192!1.35e-14!42;CL:0000514!1.35e-14!42;CL:0000359!4.36e-12!32;CL:0000220!1.11e-11!246;CL:0000393!1.44e-11!60;CL:0000211!1.44e-11!60;CL:0002321!2.89e-11!248;CL:0002371!6.23e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.65e-12;32!CL:0000134;3.05e-11;55!CL:0000192;1.93e-10;43!CL:0000723;5.28e-10;61!CL:0000048;1.19e-09;58!CL:0000187;1.55e-08;55!CL:0000057;2.19e-08;73!CL:0002320;5.94e-08;188!CL:0000034;8.01e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.30e-20,76;CL:0000680,2.38e-16,58;CL:0000056,2.38e-16,58;CL:0000355,2.38e-16,58;CL:0000187,2.39e-15,55;CL:0000192,5.01e-15,43;CL:0000514,5.01e-15,43;CL:0000222,1.00e-14,121;CL:0000359,1.40e-12,32;CL:0000393,9.54e-12,61;CL:0000211,9.54e-12,61;CL:0002321,3.54e-10,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.93e-10;43!CL:0000355;2.56e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!3.69e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.04e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.27e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!2.62e-22!143;UBERON:0000914!2.58e-20!83;UBERON:0002329!2.58e-20!83;UBERON:0003077!2.58e-20!83;UBERON:0003059!2.58e-20!83;UBERON:0007282!2.58e-20!83;UBERON:0009618!2.58e-20!83;UBERON:0007285!2.58e-20!83;UBERON:0002100!1.26e-18!216;UBERON:0000475!6.09e-17!365;UBERON:0000490!1.35e-16!138;UBERON:0003104!1.73e-16!238;UBERON:0009142!1.73e-16!238;UBERON:0002049!2.20e-16!79;UBERON:0007798!2.20e-16!79;UBERON:0004290!3.19e-16!70;UBERON:0000486!3.45e-16!82;UBERON:0000481!1.03e-15!347;UBERON:0003914!1.80e-15!118;UBERON:0000468!2.42e-15!659;UBERON:0002385!1.29e-14!63;UBERON:0001015!1.29e-14!63;UBERON:0000383!1.29e-14!63;UBERON:0001134!2.03e-14!61;UBERON:0002036!2.03e-14!61;UBERON:0003082!2.03e-14!61;UBERON:0004872!2.12e-14!84;UBERON:0000055!4.03e-13!69;UBERON:0000467!4.15e-13!625;UBERON:0000480!5.36e-13!626;UBERON:0001981!9.84e-13!60;UBERON:0007500!9.84e-13!60;UBERON:0004537!9.84e-13!60;UBERON:0006965!9.84e-13!60;UBERON:0000477!3.85e-12!286;UBERON:0003102!8.65e-12!95;UBERON:0000926!1.50e-11!448;UBERON:0004120!1.50e-11!448;UBERON:0006603!1.50e-11!448;UBERON:0000119!1.93e-11!312;UBERON:0001637!3.91e-11!42;UBERON:0003509!3.91e-11!42;UBERON:0004572!3.91e-11!42;UBERON:0000483!5.87e-11!309;UBERON:0004535!2.87e-10!110;UBERON:0001009!5.07e-10!113;UBERON:0004111!2.88e-09!241;UBERON:0004573!8.67e-09!33;UBERON:0004571!8.67e-09!33;UBERON:0002050!1.61e-08!605;UBERON:0005423!1.61e-08!605;UBERON:0000923!2.68e-08!604;UBERON:0005291!2.68e-08!604;UBERON:0006598!2.68e-08!604;UBERON:0002532!2.68e-08!604;UBERON:0000922!2.86e-08!612;UBERON:0004119!9.07e-07!169;UBERON:0000925!9.07e-07!169;UBERON:0006595!9.07e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.73e-08;33!UBERON:0004571;1.73e-08;33!UBERON:0002384;3.17e-08;198!UBERON:0001637;4.23e-08;42!UBERON:0003509;4.23e-08;42!UBERON:0004572;4.23e-08;42!UBERON:0002049;1.88e-07;75!UBERON:0007798;1.88e-07;75!UBERON:0007500;2.05e-07;56!UBERON:0001981;2.05e-07;56!UBERON:0004537;2.05e-07;56!UBERON:0000055;6.86e-07;65 | |||
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| ||
|short_description=p2@FAM114A1 | |||
}} | }} |
Latest revision as of 16:22, 17 September 2015
Short description: | p2@FAM114A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM114A1_5end |
Coexpression cluster: | C938_leiomyoma_Smooth_Preadipocyte_hepatic_basal_Adipocyte_Ewing |
Association with transcript: | 21bp_to_ENST00000515037_5end |
EntrezGene: | FAM114A1 |
HGNC: | 25087 |
UniProt: | Q6MZV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.30e-20 | 76 |
muscle precursor cell | 2.38e-16 | 58 |
myoblast | 2.38e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.38e-16 | 58 |
muscle cell | 2.39e-15 | 55 |
smooth muscle cell | 5.01e-15 | 43 |
smooth muscle myoblast | 5.01e-15 | 43 |
mesodermal cell | 1.00e-14 | 121 |
vascular associated smooth muscle cell | 1.40e-12 | 32 |
electrically responsive cell | 9.54e-12 | 61 |
electrically active cell | 9.54e-12 | 61 |
embryonic cell | 3.54e-10 | 250 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.27e-08 | 14 |