FFCP PHASE1:Hg19::chr2:15731978..15732050,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1653 | |EntrezGene=1653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2734 | |HGNC=2734 | ||
|TSSclassifier=strong | |||
|UniProt=B4DPN6 | |UniProt=B4DPN6 | ||
|association_with_transcript=0bp_to_ENST00000543614_5end | |association_with_transcript=0bp_to_ENST00000543614_5end | ||
|cluster_id=chr2:15731978..15732050,+ | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_1_at_DDX1_5end | |description=CAGE_peak_1_at_DDX1_5end | ||
|id=chr2:15731978..15732050,+ | |id=chr2:15731978..15732050,+ | ||
|ontology_enrichment_celltype=CL:0002620!1.49e-07!23 | |ontology_enrichment_celltype=CL:0002620!1.49e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.59e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.49e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.54e-14!235;DOID:14566!2.38e-13!239;DOID:0050687!2.73e-10!143;DOID:305!6.70e-07!106 | |ontology_enrichment_disease=DOID:162!1.54e-14!235;DOID:14566!2.38e-13!239;DOID:0050687!2.73e-10!143;DOID:305!6.70e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.54e-14,235;DOID:14566,2.38e-13,239;DOID:0050687,2.73e-10,143;DOID:305,6.70e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001017!6.29e-08!82;UBERON:0000955!7.32e-08!69;UBERON:0006238!7.32e-08!69;UBERON:0004121!7.53e-08!169;UBERON:0000073!1.03e-07!94;UBERON:0001016!1.03e-07!94;UBERON:0002780!1.27e-07!41;UBERON:0001890!1.27e-07!41;UBERON:0006240!1.27e-07!41;UBERON:0000475!2.03e-07!365;UBERON:0003080!2.43e-07!42;UBERON:0000924!3.87e-07!173;UBERON:0006601!3.87e-07!173;UBERON:0005743!4.09e-07!86;UBERON:0002616!5.38e-07!59;UBERON:0001049!9.36e-07!57;UBERON:0005068!9.36e-07!57;UBERON:0006241!9.36e-07!57;UBERON:0007135!9.36e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.03e-08,223;UBERON:0001016,1.05e-08,89;UBERON:0001017,4.11e-08,81;UBERON:0000955,4.55e-08,68;UBERON:0006238,4.55e-08,68;UBERON:0010314,1.09e-07,132;UBERON:0002780,1.27e-07,41;UBERON:0001890,1.27e-07,41;UBERON:0003080,1.27e-07,41;UBERON:0006240,1.27e-07,41;UBERON:0004121,2.51e-07,171;UBERON:0000924,2.51e-07,171;UBERON:0006601,2.51e-07,171;UBERON:0001049,5.76e-07,56;UBERON:0005068,5.76e-07,56;UBERON:0006241,5.76e-07,56;UBERON:0007135,5.76e-07,56;UBERON:0000073,6.92e-07,53;UBERON:0002616,6.92e-07,53 | |||
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3008286764459 | ||
|short_description=p1@DDX1 | |short_description=p1@DDX1 | ||
}} | }} |
Latest revision as of 16:32, 17 September 2015
Short description: | p1@DDX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DDX1_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | 0bp_to_ENST00000543614_5end |
EntrezGene: | DDX1 |
HGNC: | 2734 |
UniProt: | B4DPN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.49e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.03e-08 | 223 |
nervous system | 1.05e-08 | 89 |
central nervous system | 4.11e-08 | 81 |
brain | 4.55e-08 | 68 |
future brain | 4.55e-08 | 68 |
structure with developmental contribution from neural crest | 1.09e-07 | 132 |
regional part of forebrain | 1.27e-07 | 41 |
forebrain | 1.27e-07 | 41 |
anterior neural tube | 1.27e-07 | 41 |
future forebrain | 1.27e-07 | 41 |
ectoderm-derived structure | 2.51e-07 | 171 |
ectoderm | 2.51e-07 | 171 |
presumptive ectoderm | 2.51e-07 | 171 |
neural tube | 5.76e-07 | 56 |
neural rod | 5.76e-07 | 56 |
future spinal cord | 5.76e-07 | 56 |
neural keel | 5.76e-07 | 56 |
regional part of nervous system | 6.92e-07 | 53 |
regional part of brain | 6.92e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.54e-14 | 235 |
disease of cellular proliferation | 2.38e-13 | 239 |
cell type cancer | 2.73e-10 | 143 |
carcinoma | 6.70e-07 | 106 |