FFCP PHASE1:Hg19::chr19:38423185..38423242,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:38423185..38423242,+
|short_description=p2@SIPA1L3
|description=CAGE_peak_2_at_SIPA1L3_5end
|association_with_transcript=201bp_to_ENST00000476317_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23094 | |EntrezGene=23094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23801 | |HGNC=23801 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=201bp_to_ENST00000476317_5end | |||
|cluster_id=chr19:38423185..38423242,+ | |||
|description=CAGE_peak_2_at_SIPA1L3_5end | |||
|id=chr19:38423185..38423242,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.76e-23!254;CL:0000223!1.66e-09!59;CL:0002076!3.03e-09!43;CL:1000497!9.34e-08!18;CL:0002518!9.34e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;7.92e-12;17!CL:0002518;7.92e-12;17!CL:1000507;1.23e-10;10!CL:1000494;1.23e-10;10!CL:1000449;6.90e-10;15!CL:0002076;1.90e-08;42!CL:0000990;7.72e-08;8!CL:0002681;2.64e-07;12!CL:0002584;2.64e-07;12!CL:0000451;4.13e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.41e-22,253;CL:1000497,5.41e-12,17;CL:0002518,5.41e-12,17;CL:1000507,1.03e-10,10;CL:1000494,1.03e-10,10;CL:1000449,4.81e-10,15;CL:0002076,8.02e-10,42;CL:0000223,8.17e-10,58;CL:0000990,7.90e-08,8;CL:0002681,1.99e-07,12;CL:0002584,1.99e-07,12;CL:0000451,4.92e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0001041;7.08e-08;30 | |||
|ontology_enrichment_disease=DOID:305!1.25e-18!106;DOID:0050687!1.10e-09!143;DOID:299!2.24e-09!25;DOID:162!6.12e-09!235;DOID:14566!4.94e-08!239;DOID:1749!6.03e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;1.36e-11;25!DOID:1749;3.18e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.58e-18,106;DOID:299,1.74e-11,25;DOID:0050687,1.08e-10,143;DOID:162,7.98e-10,235;DOID:14566,3.96e-09,239;DOID:1749,3.50e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.74e-16!155;UBERON:0001555!1.74e-16!155;UBERON:0007026!1.74e-16!155;UBERON:0004119!9.67e-16!169;UBERON:0000925!9.67e-16!169;UBERON:0006595!9.67e-16!169;UBERON:0004921!2.11e-15!129;UBERON:0004185!2.11e-15!129;UBERON:0000466!1.27e-12!126;UBERON:0000464!9.12e-12!104;UBERON:0005177!1.20e-11!107;UBERON:0001041!2.06e-11!98;UBERON:0000077!5.34e-11!130;UBERON:0000058!3.04e-09!26;UBERON:0005409!9.30e-09!35;UBERON:0005911!1.18e-08!82;UBERON:0002553!4.42e-08!70;UBERON:0001004!6.51e-08!72;UBERON:0000080!1.87e-07!18;UBERON:0002120!1.87e-07!18;UBERON:0004875!1.87e-07!18;UBERON:0005721!1.87e-07!18;UBERON:0005754!1.87e-07!18;UBERON:0007297!1.87e-07!18;UBERON:0003887!2.32e-07!21;UBERON:0003064!2.45e-07!37;UBERON:0006554!2.49e-07!44;UBERON:0005172!3.13e-07!55;UBERON:0005173!3.13e-07!55;UBERON:0001008!6.50e-07!45;UBERON:0006555!6.88e-07!17;UBERON:0005103!6.88e-07!17;UBERON:0000083!6.88e-07!17;UBERON:0009201!6.88e-07!17;UBERON:0004819!6.88e-07!17;UBERON:0006553!6.88e-07!17;UBERON:0003074!6.88e-07!17;UBERON:0003060!6.88e-07!17;UBERON:0004876!6.95e-07!20;UBERON:0005153!7.46e-07!37;UBERON:0000160!8.73e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.23e-10;10!UBERON:0009773;1.23e-10;10!UBERON:0001231;1.23e-10;10!UBERON:0004810;1.23e-10;10!UBERON:0006555;6.90e-10;15!UBERON:0004819;6.90e-10;15!UBERON:0001285;6.90e-10;15!UBERON:0007684;6.90e-10;15!UBERON:0002113;2.03e-09;24!UBERON:0011143;2.03e-09;24!UBERON:0004921;3.19e-09;33!UBERON:0006554;6.75e-09;30!UBERON:0001008;6.75e-09;30!UBERON:0005409;2.30e-08;22!UBERON:0002048;2.86e-08;22!UBERON:0000117;2.86e-08;22!UBERON:0000171;2.86e-08;22!UBERON:0000170;2.86e-08;22!UBERON:0001851;3.19e-08;15!UBERON:0000489;9.16e-08;29!UBERON:0004807;1.19e-07;22!UBERON:0001225;2.64e-07;12!UBERON:0008987;2.64e-07;12!UBERON:0005177;8.90e-07;99!UBERON:0005178;9.39e-07;34!UBERON:0002224;9.39e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.08e-20,101;UBERON:0001007,2.16e-14,145;UBERON:0001555,2.16e-14,145;UBERON:0007026,2.16e-14,145;UBERON:0004119,1.36e-13,160;UBERON:0000925,1.36e-13,160;UBERON:0006595,1.36e-13,160;UBERON:0004921,4.31e-13,118;UBERON:0009569,4.44e-12,112;UBERON:0002113,6.67e-11,26;UBERON:0003918,6.67e-11,26;UBERON:0011143,6.67e-11,26;UBERON:0005095,6.67e-11,26;UBERON:0007687,6.67e-11,26;UBERON:0005911,7.48e-11,82;UBERON:0004810,1.03e-10,10;UBERON:0006555,1.05e-10,16;UBERON:0004819,1.05e-10,16;UBERON:0004211,4.81e-10,15;UBERON:0009773,4.81e-10,15;UBERON:0001231,4.81e-10,15;UBERON:0001285,4.81e-10,15;UBERON:0007684,4.81e-10,15;UBERON:0004208,4.81e-10,15;UBERON:0005172,8.60e-10,54;UBERON:0005173,8.60e-10,54;UBERON:0000489,4.49e-09,31;UBERON:0006554,1.16e-08,47;UBERON:0005153,2.13e-08,37;UBERON:0002048,2.27e-08,22;UBERON:0000117,2.27e-08,22;UBERON:0000171,2.27e-08,22;UBERON:0000170,2.27e-08,22;UBERON:0005597,2.27e-08,22;UBERON:0000118,2.27e-08,22;UBERON:0001851,2.44e-08,15;UBERON:0001008,2.62e-08,48;UBERON:0001041,3.15e-08,87;UBERON:0005178,6.95e-08,34;UBERON:0002224,6.95e-08,34;UBERON:0002417,7.33e-08,60;UBERON:0000916,7.33e-08,60;UBERON:0005181,1.78e-07,35;UBERON:0001225,1.99e-07,12;UBERON:0008987,1.99e-07,12;UBERON:0005409,8.26e-07,25 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,4.91467873003018,20.9340350391728,0.436882744260345,0.263766978228454,0.247532705920093,0,0,0,0,0,0.492484232307152,0.408001382488506,0,0.572471974262113,0.958120975510189,1.38096903554283,2.90370941842215,3.20192298854788,2.59745578335141,0.393364276848904,0,0.154816123316076,1.83884244895785,2.409647350226,1.47901604066715,0,0,0.880801318004542,0,0.200544447470142,0.651032612147555,0.223915474239924,0,0.257575567634187,0.872389432677388,0.377875943688809,0,0.232429036905685,0.411167888021826,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,0,0.376484679085209,0,0.674170453335254,0,0.320929027076094,0.639337125799041,0.329851300186716,0.398927315243264,1.27867425159808,0.290209238628584,0.56738522469114,1.24564449799115,0.251248665256743,0,0.217188844705117,0,1.84138817993782,0.316462387440884,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0.365328307529268,0,1.09227722252426,0.889509253863555,1.70692089026603,2.80277190925209,1.72425731986345,1.32208974556972,0.954053754535364,6.26134266020393,6.45960908308033,2.29363936875137,2.64342657158052,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0.221729397462564,0.527008714158756,4.78073625566651,4.37154345951051,2.59549109949101,3.8945687238562,5.39802185627728,2.52620124985844,1.19245312152671,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0.626984899610432,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0,0,0.354668382198357,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0.169560592310488,2.89891279744945,2.18196896472668,2.58124135850103,1.34171076742555,1.06023814657188,0.580969714347592,1.0366105501537,2.27088765788066,1.45990943630332,0,0,0,0,0,0.354920400119532,0.674338760312407,0.723033089650446,0,1.30727666455444,0.237270619111097,0.404493924480493,0.784885860501384,0.38474715694639,0,0,0,0,2.53510069643662,3.9313088667105,0,0,18.448265781467,0.514703430895577,0.548751427043128,1.1240175325762,1.40740561376283,1.48141512253647,0,0,0,0.579652024875384,0.469634776943287,0,0,0,4.74122638775565,2.57545848628462,0,0,0.297262324577456,1.87467667973554,2.35174979478403,0.850650583454319,0.53735113621709,1.16253575405585,0.766765358330422,0,0,0,0.288239906833923,0.50496973370552,0,0,0,0,0,0,0,0.112131084345361,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22015127883421,0.871533458600294,5.99837947092342,0,0,0,0.718874566474748,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0.128343036279748,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0,0.271265023699736,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.33930202182193,4.41114234667227,0.828728900423067,0.114814448164607,0,0,11.2799903226853,7.85556438465031,18.8243944602445,16.0753147118587,4.85537492907228,0,0,1.51141141271498,1.54227252690289,5.96082162596476,7.02365683396795,10.9596797409366,16.6215201785745,10.7459882266646,0,0,10.0015548795392,27.5532302387753,6.50756789328606,2.67906630284078,0,0,1.14853107599234,2.60024098414608,0,0,0,0,0,0,0,0,0,0.826424576804891,1.92190067365106,3.95599408733211,1.0115778085555,0,0,0.6970372701606,0,1.06461206063404,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,2.11688647996127,0,1.08890984861323,2.7301702225266,0.43050537267123,1.68471475667626,1.33029046061003,0,0,0,0.569647187174163,0.238231775457789,1.23408681925858,0.648473311192717,0,1.58625035258854,0,0,1.71528151186722,0.371606350251437,0,0,0,0.59873811429845,0.191505370132367,7.62024897805978,2.59697552219644,4.49275484981534,1.14117339516596,1.25343916618419,0,0.846458889008016,1.4452926759333,1.00899853595524,0.851692475380653,0,2.45792611446766,2.90778940260141,2.83643540910244,0,0,0,0,0,0,8.79560539918633,0,8.61659704421545,0,3.69376990848337,0.71623345421307,1.48482340416319,0.921482106297696,0,0,0.111308705022906,0,5.06700979507184,1.59398390600856,3.31540698637377,3.77899121781414,34.1577399557197,2.70786572014353,0,13.749857725541,6.62378346299754,1.02314474045374,0.690503839458535,0,0,0,0,0,1.04171104434093,30.5235399986723,0,12.517279311405,6.86484855790469,8.03718118010984,0.344743373241465,0,0,0,0,0,0,0,0,0,2.78847488557207,0.846452843541768,0,0,0,0,0,0,0,0,3.29658538429552,0.166211681900156,0,0,0,0,0.158936578980379,38.1906496795729,10.2836669140263,9.47065578607404,0,14.9289289661776,11.4110258209308,6.72133159426988,0,0,0,0.606610196826093,0,0,0,10.7615540412649,0,6.31335044559025,12.0990716048664,0.30607276163049,0.126373159256976,0,0,10.634461963315,9.26777476451397,16.9523775939902,15.5314158704846,5.69219092059585,0,4.5125531967134,0.783939179315021,4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| ||
|short_description=p2@SIPA1L3 | |||
}} | }} |
Latest revision as of 18:38, 17 September 2015
Short description: | p2@SIPA1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIPA1L3_5end |
Coexpression cluster: | NA |
Association with transcript: | 201bp_to_ENST00000476317_5end |
EntrezGene: | SIPA1L3 |
HGNC: | 23801 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.41e-22 | 253 |
kidney cell | 5.41e-12 | 17 |
kidney epithelial cell | 5.41e-12 | 17 |
kidney tubule cell | 1.03e-10 | 10 |
nephron tubule epithelial cell | 1.03e-10 | 10 |
epithelial cell of nephron | 4.81e-10 | 15 |
endo-epithelial cell | 8.02e-10 | 42 |
endodermal cell | 8.17e-10 | 58 |
conventional dendritic cell | 7.90e-08 | 8 |
kidney cortical cell | 1.99e-07 | 12 |
renal cortical epithelial cell | 1.99e-07 | 12 |
dendritic cell | 4.92e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.58e-18 | 106 |
adenocarcinoma | 1.74e-11 | 25 |
cell type cancer | 1.08e-10 | 143 |
cancer | 7.98e-10 | 235 |
disease of cellular proliferation | 3.96e-09 | 239 |
squamous cell carcinoma | 3.50e-07 | 14 |