FFCP PHASE1:Hg19::chr1:36396677..36396749,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=192669 | |EntrezGene=192669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18421 | |HGNC=18421 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H9G7,Q5TA56,B4E1P5,B1ALI0 | |UniProt=Q9H9G7,Q5TA56,B4E1P5,B1ALI0 | ||
|association_with_transcript=0bp_to_ENST00000373191,ENST00000397828,NM_024852,NM_177422_5end | |association_with_transcript=0bp_to_ENST00000373191,ENST00000397828,NM_024852,NM_177422_5end | ||
|cluster_id=chr1:36396677..36396749,+ | |||
|description=CAGE_peak_1_at_EIF2C3_5end | |description=CAGE_peak_1_at_EIF2C3_5end | ||
|id=chr1:36396677..36396749,+ | |id=chr1:36396677..36396749,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.18e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.33e-39!115;UBERON:0001049!2.02e-19!57;UBERON:0005068!2.02e-19!57;UBERON:0006241!2.02e-19!57;UBERON:0007135!2.02e-19!57;UBERON:0002616!1.03e-15!59;UBERON:0001017!1.49e-15!82;UBERON:0003080!6.59e-15!42;UBERON:0002780!2.27e-14!41;UBERON:0001890!2.27e-14!41;UBERON:0006240!2.27e-14!41;UBERON:0005743!3.57e-14!86;UBERON:0000955!3.62e-14!69;UBERON:0006238!3.62e-14!69;UBERON:0000073!8.99e-14!94;UBERON:0001016!8.99e-14!94;UBERON:0002346!3.79e-12!90;UBERON:0003075!6.41e-12!86;UBERON:0007284!6.41e-12!86;UBERON:0001893!1.16e-11!34;UBERON:0002020!1.31e-11!34;UBERON:0003528!1.31e-11!34;UBERON:0002791!2.38e-11!33;UBERON:0001869!1.45e-10!32;UBERON:0000153!5.60e-08!129;UBERON:0007811!5.60e-08!129;UBERON:0002619!1.85e-07!22;UBERON:0003056!1.85e-07!61;UBERON:0000956!1.89e-07!25;UBERON:0000203!1.89e-07!25;UBERON:0000033!6.55e-07!123;UBERON:0001950!6.78e-07!20;UBERON:0000924!9.05e-07!173;UBERON:0006601!9.05e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.94e-11;41!UBERON:0001890;4.94e-11;41!UBERON:0007023;8.03e-11;114!UBERON:0000073;1.11e-10;53!UBERON:0002616;1.11e-10;53!UBERON:0003528;1.07e-09;34!UBERON:0002020;1.07e-09;34!UBERON:0001893;1.26e-09;34!UBERON:0002791;1.34e-09;32!UBERON:0001869;2.52e-09;32!UBERON:0002619;3.13e-07;22!UBERON:0000956;3.51e-07;25!UBERON:0000203;3.51e-07;25!UBERON:0000955;4.30e-07;68!UBERON:0001017;9.48e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.29e-38,114;UBERON:0001049,7.14e-19,56;UBERON:0005068,7.14e-19,56;UBERON:0006241,7.14e-19,56;UBERON:0007135,7.14e-19,56;UBERON:0000073,2.76e-17,53;UBERON:0002616,2.76e-17,53;UBERON:0001017,4.42e-15,81;UBERON:0001016,1.42e-14,89;UBERON:0002780,2.27e-14,41;UBERON:0001890,2.27e-14,41;UBERON:0003080,2.27e-14,41;UBERON:0006240,2.27e-14,41;UBERON:0000955,1.08e-13,68;UBERON:0006238,1.08e-13,68;UBERON:0002346,7.77e-12,86;UBERON:0001893,1.16e-11,34;UBERON:0003075,1.30e-11,82;UBERON:0007284,1.30e-11,82;UBERON:0003528,1.31e-11,34;UBERON:0002020,1.31e-11,34;UBERON:0002791,8.35e-11,32;UBERON:0001869,1.45e-10,32;UBERON:0011216,7.30e-08,223;UBERON:0003056,1.61e-07,61;UBERON:0002619,1.85e-07,22;UBERON:0000956,1.88e-07,25;UBERON:0000203,1.88e-07,25;UBERON:0001950,6.78e-07,20 | |||
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| ||
|short_description=p1@EIF2C3 | |short_description=p1@EIF2C3 | ||
}} | }} |
Latest revision as of 20:04, 17 September 2015
Short description: | p1@EIF2C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EIF2C3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373191, ENST00000397828, NM_024852, NM_177422_5end |
EntrezGene: | EIF2C3 |
HGNC: | 18421 |
UniProt: | Q9H9G7Q5TA56B4E1P5B1ALI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.18e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.29e-38 | 114 |
neural tube | 7.14e-19 | 56 |
neural rod | 7.14e-19 | 56 |
future spinal cord | 7.14e-19 | 56 |
neural keel | 7.14e-19 | 56 |
regional part of nervous system | 2.76e-17 | 53 |
regional part of brain | 2.76e-17 | 53 |
central nervous system | 4.42e-15 | 81 |
nervous system | 1.42e-14 | 89 |
regional part of forebrain | 2.27e-14 | 41 |
forebrain | 2.27e-14 | 41 |
anterior neural tube | 2.27e-14 | 41 |
future forebrain | 2.27e-14 | 41 |
brain | 1.08e-13 | 68 |
future brain | 1.08e-13 | 68 |
neurectoderm | 7.77e-12 | 86 |
telencephalon | 1.16e-11 | 34 |
neural plate | 1.30e-11 | 82 |
presumptive neural plate | 1.30e-11 | 82 |
brain grey matter | 1.31e-11 | 34 |
gray matter | 1.31e-11 | 34 |
regional part of telencephalon | 8.35e-11 | 32 |
cerebral hemisphere | 1.45e-10 | 32 |
organ system subdivision | 7.30e-08 | 223 |
pre-chordal neural plate | 1.61e-07 | 61 |
regional part of cerebral cortex | 1.85e-07 | 22 |
cerebral cortex | 1.88e-07 | 25 |
pallium | 1.88e-07 | 25 |
neocortex | 6.78e-07 | 20 |