FFCP PHASE1:Hg19::chr3:31573628..31573666,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=201595 | |EntrezGene=201595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30611 | |HGNC=30611 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-463bp_to_ENST00000453168_5end | |association_with_transcript=-463bp_to_ENST00000453168_5end | ||
|cluster_id=chr3:31573628..31573666,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_9_at_STT3B_5end | |description=CAGE_peak_9_at_STT3B_5end | ||
|id=chr3:31573628..31573666,+ | |id=chr3:31573628..31573666,+ | ||
|ontology_enrichment_celltype=CL:0002087!3.20e-25!119;CL:0002031!3.95e-25!124;CL:0000738!1.95e-21!140;CL:0000860!2.06e-20!45;CL:0002057!1.02e-19!42;CL:0000037!5.47e-19!172;CL:0000566!5.47e-19!172;CL:0002032!1.42e-18!165;CL:0000837!1.42e-18!165;CL:0000988!3.45e-18!182;CL:0000838!1.47e-13!52;CL:0000542!3.10e-13!53;CL:0000051!3.10e-13!53;CL:0000839!9.61e-13!70;CL:0002194!2.43e-12!63;CL:0000576!2.43e-12!63;CL:0000040!2.43e-12!63;CL:0000559!2.43e-12!63;CL:0000557!6.95e-12!71;CL:0002009!1.53e-11!65;CL:0000766!1.30e-10!76;CL:0000945!1.52e-09!24;CL:0000826!1.52e-09!24;CL:0000763!1.86e-07!112;CL:0000049!1.86e-07!112;CL:0000236!5.20e-07!14 | |ontology_enrichment_celltype=CL:0002087!3.20e-25!119;CL:0002031!3.95e-25!124;CL:0000738!1.95e-21!140;CL:0000860!2.06e-20!45;CL:0002057!1.02e-19!42;CL:0000037!5.47e-19!172;CL:0000566!5.47e-19!172;CL:0002032!1.42e-18!165;CL:0000837!1.42e-18!165;CL:0000988!3.45e-18!182;CL:0000838!1.47e-13!52;CL:0000542!3.10e-13!53;CL:0000051!3.10e-13!53;CL:0000839!9.61e-13!70;CL:0002194!2.43e-12!63;CL:0000576!2.43e-12!63;CL:0000040!2.43e-12!63;CL:0000559!2.43e-12!63;CL:0000557!6.95e-12!71;CL:0002009!1.53e-11!65;CL:0000766!1.30e-10!76;CL:0000945!1.52e-09!24;CL:0000826!1.52e-09!24;CL:0000763!1.86e-07!112;CL:0000049!1.86e-07!112;CL:0000236!5.20e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-32;33!CL:0002057;1.32e-32;33!CL:0000473;1.27e-22;39!CL:0000234;1.27e-22;39!CL:0000576;1.52e-16;48!CL:0000766;3.32e-11;69!CL:0002087;5.40e-10;104!CL:0000945;6.80e-10;24!CL:0000236;1.98e-09;13!CL:0000738;2.47e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.94e-32,42;CL:0002057,1.94e-32,42;CL:0002031,4.71e-29,120;CL:0000473,1.29e-28,48;CL:0000234,1.29e-28,48;CL:0002087,2.55e-28,115;CL:0000738,1.46e-24,136;CL:0000839,1.63e-21,66;CL:0000557,5.02e-21,67;CL:0002194,1.13e-20,59;CL:0000576,1.13e-20,59;CL:0000040,1.13e-20,59;CL:0000559,1.13e-20,59;CL:0002009,1.17e-19,61;CL:0000037,3.36e-19,168;CL:0002032,5.12e-19,161;CL:0000837,5.12e-19,161;CL:0000988,6.15e-19,177;CL:0000766,8.61e-19,72;CL:0000945,6.35e-11,24;CL:0000826,6.35e-11,24;CL:0000763,1.23e-10,108;CL:0000049,1.23e-10,108;CL:0000236,9.29e-10,14;CL:0000838,4.61e-09,52;CL:0000542,8.89e-09,53;CL:0000051,8.89e-09,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.46e-23;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.21e-11!102;UBERON:0003061!1.21e-11!102;UBERON:0002193!7.63e-10!112;UBERON:0002371!1.54e-09!80;UBERON:0001049!2.60e-09!57;UBERON:0005068!2.60e-09!57;UBERON:0006241!2.60e-09!57;UBERON:0007135!2.60e-09!57;UBERON:0001474!4.64e-09!86;UBERON:0007023!8.48e-08!115;UBERON:0003080!1.18e-07!42;UBERON:0002780!2.92e-07!41;UBERON:0001890!2.92e-07!41;UBERON:0006240!2.92e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.10e-18,98;UBERON:0003061,1.10e-18,98;UBERON:0002371,2.01e-18,76;UBERON:0001474,2.95e-16,82;UBERON:0002193,9.52e-16,108;UBERON:0002405,4.31e-15,93;UBERON:0004765,7.68e-14,90;UBERON:0001434,2.10e-11,100;UBERON:0000073,6.13e-08,53;UBERON:0002616,6.13e-08,53;UBERON:0001049,3.17e-07,56;UBERON:0005068,3.17e-07,56;UBERON:0006241,3.17e-07,56;UBERON:0007135,3.17e-07,56 | |||
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|phase1_expression=0.908391896352783,0.642301571672949,0.563817616383885,0,1.34088328328186,0,2.53299878168311,0,0.522371256399677,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.612002073732759,0,0,0.273748850145768,0.125542639594803,0.993374274723366,1.47781061009902,1.57421562627358,0.393364276848904,0.767658796194425,0.309632246632152,0,0.30120591877825,0.369754010166788,0.619737604642413,0.284338464974843,1.46800219667424,0.553995408531877,2.00544447470142,1.08505435357926,0.223915474239924,0.32389366601898,0,1.59938062657521,1.88937971844405,1.69808842831471,1.62700325833979,3.70051099219643,3.40677007984614,1.43846196161075,1.7931249457037,2.12834006899727,6.89491361473237,3.22742341791913,18.9597081232078,1.69418105588344,1.63743690034707,2.02251136000576,3.67300670845083,4.17207735198922,7.03270838378945,0.989553900560148,1.19678194572979,1.70489900213078,1.7412554317715,3.40431134814684,6.85104473895132,2.26123798731069,2.08593167368081,3.04064382587163,1.21079900526674,6.2607198117886,4.43047342417238,0.211255286311942,0.850417199860174,0.838634582033504,0.561643155732475,0,0.964353520182481,0.570025487482497,0.59675003159727,1.27864907635244,1.75996244461323,1.63841583378639,1.77901850772711,1.70692089026603,1.60158394814405,2.87376219977242,1.32208974556972,1.90810750907073,1.70763890732835,0.587237189370939,2.29363936875137,0,0,0.263384084775077,0.983548850569165,1.17903228824749,1.02800749499755,1.00311897234407,0.651844533267181,1.89379122293893,0,0.668462741311041,0.294605907474837,0.664601683750863,1.08321545506006,0.768547918354051,0.390178042679635,0.986627427622057,0.552700035571697,0.289803085735052,0.889719378972363,1.33770414044857,0,0.679856056185397,0.766440987203842,0.68725489096526,0.506039384039006,0.95569624297229,0,1.90090408889675,0.602300476311091,0.255973222308837,1.24930726552346,0.473554504088034,3.28451198768419,0.604820229674197,0.802320587350522,0.724122019413995,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0,1.0478326039817,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0.476981248610684,0.571994910780128,0.74291500265913,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0.33472061276467,0.805658634218294,0.760272105718513,0.24406205754817,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0,0.573673241497627,0,0.560677600142307,1.06748995729705,0,0.933633106199299,0,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0.122834317311768,0.516628905878827,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0,0.538168907066586,0,0.423863802319124,0.600182192168805,0,0,0.18611685633159,0.168776332241266,0,0.252433774244115,0.368199594569197,0,0,0,0,0,0,0.286804595389004,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0.217879444092406,0.474541238222193,0.674156540800822,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.651616610620649,1.03993478527958,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.190254152234598,3.1608175918371,2.57545848628462,0,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0.179117045405697,0.581267877027924,0.383382679165211,0,0.704387472105808,1.65862492432618,1.44119953416961,1.64115163454294,0.063497894292169,0.381988425558278,1.17217447210047,0,0.411309970813294,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,1.00451418286425,0,0,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0.336255431980582,0.394061520403854,1.50939302401662,0.77005821767849,0.254094624222463,1.30139853857622,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0.315404830067869,0.117141414992713,0.300946099727719,0,3.10419213877515,0,0.553107505625109,0.260650843404249,0.391602314925481,0.343143423810856,0.206768026122887,1.2942852049117,0.213455115606889,0.909382714338778,0,0.30239029332968,0.496215615637554,0.460385919864187,0.280660094433074,1.02511319404561,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0.348631135379878,0.604297247958111,0,0.644566922551274,0,0,0.131124414959424,0,0,0.784349769176855,1.46139224653261,0,0,0.340187410553031,0.431831832204279,0,0,0,0,0.831076008928724,0.895499018888713,0,0.522870902049801,0,0,0.650756789328606,1.13345112812495,0.27470839445503,0.742585499285292,0,0,0,0.290012154876366,0.462145851343933,0.307007349452259,0.551346289938122,0,0,0,0.267096106940212,0.165284915360978,0,0.127612712494584,0.4046311234222,0,0,0.6970372701606,0,0.532306030317022,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0.78494864019923,0,0.274537029736055,0,0,0,0.421258456238981,0,0,1.05650146756755,0.272999822815972,0.141405431953713,2.260162332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| ||
|short_description=p9@STT3B | |short_description=p9@STT3B | ||
}} | }} |
Latest revision as of 22:32, 17 September 2015
Short description: | p9@STT3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_STT3B_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -463bp_to_ENST00000453168_5end |
EntrezGene: | STT3B |
HGNC: | 30611 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.94e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.94e-32 | 42 |
hematopoietic lineage restricted progenitor cell | 4.71e-29 | 120 |
defensive cell | 1.29e-28 | 48 |
phagocyte | 1.29e-28 | 48 |
nongranular leukocyte | 2.55e-28 | 115 |
leukocyte | 1.46e-24 | 136 |
myeloid lineage restricted progenitor cell | 1.63e-21 | 66 |
granulocyte monocyte progenitor cell | 5.02e-21 | 67 |
monopoietic cell | 1.13e-20 | 59 |
monocyte | 1.13e-20 | 59 |
monoblast | 1.13e-20 | 59 |
promonocyte | 1.13e-20 | 59 |
macrophage dendritic cell progenitor | 1.17e-19 | 61 |
hematopoietic stem cell | 3.36e-19 | 168 |
hematopoietic oligopotent progenitor cell | 5.12e-19 | 161 |
hematopoietic multipotent progenitor cell | 5.12e-19 | 161 |
hematopoietic cell | 6.15e-19 | 177 |
myeloid leukocyte | 8.61e-19 | 72 |
lymphocyte of B lineage | 6.35e-11 | 24 |
pro-B cell | 6.35e-11 | 24 |
myeloid cell | 1.23e-10 | 108 |
common myeloid progenitor | 1.23e-10 | 108 |
B cell | 9.29e-10 | 14 |
lymphoid lineage restricted progenitor cell | 4.61e-09 | 52 |
lymphocyte | 8.89e-09 | 53 |
common lymphoid progenitor | 8.89e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.10e-18 | 98 |
blood island | 1.10e-18 | 98 |
bone marrow | 2.01e-18 | 76 |
bone element | 2.95e-16 | 82 |
hemolymphoid system | 9.52e-16 | 108 |
immune system | 4.31e-15 | 93 |
skeletal element | 7.68e-14 | 90 |
skeletal system | 2.10e-11 | 100 |
regional part of nervous system | 6.13e-08 | 53 |
regional part of brain | 6.13e-08 | 53 |
neural tube | 3.17e-07 | 56 |
neural rod | 3.17e-07 | 56 |
future spinal cord | 3.17e-07 | 56 |
neural keel | 3.17e-07 | 56 |