FFCP PHASE1:Hg19::chr21:27423445..27423450,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=351 | |EntrezGene=351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=620 | |HGNC=620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-97bp_to_ENST00000415997_5end | |association_with_transcript=-97bp_to_ENST00000415997_5end | ||
|cluster_id=chr21:27423445..27423450,- | |||
|description=CAGE_peak_45_at_APP_5end | |description=CAGE_peak_45_at_APP_5end | ||
|id=chr21:27423445..27423450,- | |id=chr21:27423445..27423450,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.31e-14;1!UBERON:0004874;1.31e-14;1!UBERON:0010122;5.94e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.36e-20!115;UBERON:0001049!4.89e-15!57;UBERON:0005068!4.89e-15!57;UBERON:0006241!4.89e-15!57;UBERON:0007135!4.89e-15!57;UBERON:0000073!3.90e-14!94;UBERON:0001016!3.90e-14!94;UBERON:0001017!4.93e-14!82;UBERON:0005743!2.36e-13!86;UBERON:0002616!2.64e-12!59;UBERON:0003075!1.58e-11!86;UBERON:0007284!1.58e-11!86;UBERON:0000955!1.67e-11!69;UBERON:0006238!1.67e-11!69;UBERON:0003080!2.60e-11!42;UBERON:0002346!5.23e-11!90;UBERON:0002780!1.36e-10!41;UBERON:0001890!1.36e-10!41;UBERON:0006240!1.36e-10!41;UBERON:0002020!6.08e-10!34;UBERON:0003528!6.08e-10!34;UBERON:0001893!2.11e-09!34;UBERON:0004121!4.40e-09!169;UBERON:0002791!4.83e-09!33;UBERON:0000924!7.29e-09!173;UBERON:0006601!7.29e-09!173;UBERON:0001869!3.56e-08!32;UBERON:0000153!7.56e-08!129;UBERON:0007811!7.56e-08!129;UBERON:0000468!1.27e-07!659;UBERON:0002619!1.37e-07!22;UBERON:0000033!1.89e-07!123;UBERON:0001950!2.39e-07!20;UBERON:0000467!2.41e-07!625;UBERON:0000480!2.93e-07!626;UBERON:0000062!3.93e-07!511;UBERON:0003056!4.97e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!2.36e-20!115;UBERON:0001049!4.89e-15!57;UBERON:0005068!4.89e-15!57;UBERON:0006241!4.89e-15!57;UBERON:0007135!4.89e-15!57;UBERON:0000073!3.90e-14!94;UBERON:0001016!3.90e-14!94;UBERON:0001017!4.93e-14!82;UBERON:0005743!2.36e-13!86;UBERON:0002616!2.64e-12!59;UBERON:0003075!1.58e-11!86;UBERON:0007284!1.58e-11!86;UBERON:0000955!1.67e-11!69;UBERON:0006238!1.67e-11!69;UBERON:0003080!2.60e-11!42;UBERON:0002346!5.23e-11!90;UBERON:0002780!1.36e-10!41;UBERON:0001890!1.36e-10!41;UBERON:0006240!1.36e-10!41;UBERON:0002020!6.08e-10!34;UBERON:0003528!6.08e-10!34;UBERON:0001893!2.11e-09!34;UBERON:0004121!4.40e-09!169;UBERON:0002791!4.83e-09!33;UBERON:0000924!7.29e-09!173;UBERON:0006601!7.29e-09!173;UBERON:0001869!3.56e-08!32;UBERON:0000153!7.56e-08!129;UBERON:0007811!7.56e-08!129;UBERON:0000468!1.27e-07!659;UBERON:0002619!1.37e-07!22;UBERON:0000033!1.89e-07!123;UBERON:0001950!2.39e-07!20;UBERON:0000467!2.41e-07!625;UBERON:0000480!2.93e-07!626;UBERON:0000062!3.93e-07!511;UBERON:0003056!4.97e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0003112;4.71e-15;1!UBERON:0011158;4.71e-15;1!UBERON:0003128;4.71e-15;1!UBERON:0001703;4.71e-15;1!UBERON:0002241;4.71e-15;1!UBERON:0000989;1.31e-14;1!UBERON:0002135;1.31e-14;1!UBERON:0000941;1.31e-14;1!UBERON:0001785;1.31e-14;1!UBERON:0002464;1.31e-14;1!UBERON:0004904;1.31e-14;1!UBERON:0008811;1.31e-14;1!UBERON:0001021;1.31e-14;1!UBERON:0001873;5.94e-08;2!UBERON:0003714;5.94e-08;2!UBERON:0002702;5.94e-08;2!UBERON:0005162;5.94e-08;2!UBERON:0000122;5.94e-08;2!UBERON:0002133;5.94e-08;2!UBERON:0002791;9.14e-07;32!UBERON:0001869;9.14e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003112,4.73e-15,1;UBERON:0011158,4.73e-15,1;UBERON:0003128,4.73e-15,1;UBERON:0001703,4.73e-15,1;UBERON:0002241,4.73e-15,1;UBERON:0004761,4.73e-15,1;UBERON:0009617,4.73e-15,1;UBERON:0000989,5.42e-15,1;UBERON:0008811,5.42e-15,1;UBERON:0006258,5.42e-15,1;UBERON:0005876,5.42e-15,1;UBERON:0004874,5.42e-15,1;UBERON:0000941,7.13e-15,1;UBERON:0001785,7.13e-15,1;UBERON:0002464,7.13e-15,1;UBERON:0004904,7.13e-15,1;UBERON:0001021,7.13e-15,1;UBERON:0003902,7.13e-15,1;UBERON:0005425,7.13e-15,1;UBERON:0002135,2.41e-14,1;UBERON:0005253,3.56e-08,2;UBERON:0003714,4.38e-08,2;UBERON:0005162,4.38e-08,2;UBERON:0000122,4.38e-08,2;UBERON:0002702,5.74e-08,2;UBERON:0002133,8.04e-08,2;UBERON:0001873,8.60e-08,2;UBERON:0010122,8.60e-08,2;UBERON:0003056,1.99e-07,61;UBERON:0003075,2.78e-07,82;UBERON:0007284,2.78e-07,82;UBERON:0010314,3.87e-07,132;UBERON:0002346,6.41e-07,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,1.13061588384802,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0.37223371266318,0,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0,0,0.272746120590835,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0.380508304469197,0,0,0,0.234004265139238,0.297262324577456,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.473107245101804,0,0,0,1.03473071292505,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0.40101294060657,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.330569830721956,0.576570202095319,0.255225424989168,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.288666338176536,0,0,0.0941438007767792,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0.199579371432817,0,0,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0.703347082052564,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.834912883456661,0,0,0,0.724999575434793,0.1137934482855,0,0.236387681767936,0,0,0,0,1.08536794762867,0,0.331737779793674,0,0.87754158861589,0,0,0.230850775511391,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0,0,0,0,0,0.269604531922708,0,0,0,0.19566461893209,0.242780379534093,0.789168805698781,0,0,0,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0.347119476670262,0,0,0,0,0,0,0,0.0969890164884194,0.176512253383001,1.12990370390266,0.137041924646751,0.19871461170299,0.253243183823515,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0.271808412147228,0,0.101998217636322,0,0,0.684526894459965,0,0,0,1.11712960508902,0.687481272035051,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0.953423842781029,0.321506296930038,0,0,0,0,0.364497339948148,0,0.157611414598396,0.157363764404994,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0,0.226624183040251,0,0,0.646414781807753,0.79339561045614,0,0,0.320362237703084,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,1.3771002377715,0,0.332787154610557,0.496771223531068,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,1.22061219961398,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0.428883182749851,0.260994291965212,0,0.231522474323834,0,0.179088841081487,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0.139879507719444,0,0.127894371303652,0,0.314531883711793,0.109209638192014,0,0,0,0,0,0,0,0,0.3062454773532,0.256916900385838,1.41696576325585,0.957803154342908,0.82046545696302,0,0,2.42213468447777,1.42769420259154,0,0.11796972334774,0.183428598521679,0,0,0,0,0.225630985047772,0,0,0,0.327543835020193,0,0.135075169236789,0,1.44680757550829,0.380494861163441,0,0,1.98484471355718,0.175871244359621,0.255524855279191,0,0.672567444437648,0,0.227662191351298,0,0,0.171488009437418,0.40781839786099,0.263091094251396,0,0.111231401892069,0,0.471346769748006,0.280272163313789,0,0.215927591218621,0.9555033757741,0.142953088353313,0,0.23248285073625,0,0,0.414432328326074,0,1.38251932362818,0,0,0.0852134047591577,0.423387050190929,0,0,0,0.111855431797792,0.196300467230486,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0.219881033490858,0.1509628435666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| ||
|short_description=p45@APP | |short_description=p45@APP | ||
}} | }} |
Latest revision as of 23:02, 17 September 2015
Short description: | p45@APP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_45_at_APP_5end |
Coexpression cluster: | NA |
Association with transcript: | -97bp_to_ENST00000415997_5end |
EntrezGene: | APP |
HGNC: | 620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
olfactory region | 4.73e-15 | 1 |
primary subdivision of skull | 4.73e-15 | 1 |
cranium | 4.73e-15 | 1 |
neurocranium | 4.73e-15 | 1 |
chondrocranium | 4.73e-15 | 1 |
cartilaginous neurocranium | 4.73e-15 | 1 |
head paraxial mesoderm | 4.73e-15 | 1 |
penis | 5.42e-15 | 1 |
intromittent organ | 5.42e-15 | 1 |
lateral plate mesenchyme | 5.42e-15 | 1 |
undifferentiated genital tubercle | 5.42e-15 | 1 |
somatopleure | 5.42e-15 | 1 |
cranial nerve II | 7.13e-15 | 1 |
cranial nerve | 7.13e-15 | 1 |
nerve trunk | 7.13e-15 | 1 |
nerve connecting eye with brain | 7.13e-15 | 1 |
nerve | 7.13e-15 | 1 |
retinal neural layer | 7.13e-15 | 1 |
presumptive neural retina | 7.13e-15 | 1 |
mitral valve | 2.41e-14 | 1 |
head mesenchyme | 3.56e-08 | 2 |
neural tissue | 4.38e-08 | 2 |
multi cell component structure | 4.38e-08 | 2 |
neuron projection bundle | 4.38e-08 | 2 |
middle frontal gyrus | 5.74e-08 | 2 |
atrioventricular valve | 8.04e-08 | 2 |
caudate nucleus | 8.60e-08 | 2 |
future caudate nucleus | 8.60e-08 | 2 |
pre-chordal neural plate | 1.99e-07 | 61 |
neural plate | 2.78e-07 | 82 |
presumptive neural plate | 2.78e-07 | 82 |
structure with developmental contribution from neural crest | 3.87e-07 | 132 |
neurectoderm | 6.41e-07 | 86 |