FFCP PHASE1:Hg19::chr10:33247223..33247234,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6153 | |||
|TSSclassifier=strong | |||
|UniProt=P05556 | |||
|association_with_transcript=58bp_to_NM_002211,uc001iwt.3_5end | |||
|cluster_id=chr10:33247223..33247234,- | |||
|coexpression_cluster_id=C3013 | |||
|description=CAGE_peak_3_at_ITGB1_5end | |||
|id=chr10:33247223..33247234,- | |||
|ontology_enrichment_celltype=CL:0000055!2.76e-23!180;CL:0000220!1.14e-13!246;CL:0002321!1.22e-13!248;CL:0000680!1.64e-13!57;CL:0000056!1.64e-13!57;CL:0000355!1.64e-13!57;CL:0000057!2.04e-12!75;CL:0000187!3.59e-12!54;CL:0000393!1.96e-11!60;CL:0000211!1.96e-11!60;CL:0000359!4.92e-10!32;CL:0000192!6.46e-10!42;CL:0000514!6.46e-10!42;CL:0000183!6.67e-10!59;CL:0000222!7.31e-09!119;CL:0000548!7.79e-07!679;CL:0000004!7.79e-07!679;CL:0000255!7.79e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.85e-09;32!CL:0000192;8.18e-08;43!CL:0000187;2.69e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,7.36e-14,58;CL:0000056,7.36e-14,58;CL:0000355,7.36e-14,58;CL:0002321,1.11e-13,250;CL:0000057,5.98e-13,76;CL:0000187,1.67e-12,55;CL:0000393,9.30e-12,61;CL:0000211,9.30e-12,61;CL:0000192,3.19e-10,43;CL:0000514,3.19e-10,43;CL:0000359,4.10e-10,32;CL:0000222,5.98e-09,121 | |||
|ontology_enrichment_development_v019=CL:0000355;6.96e-08;58!CL:0000514;8.18e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!6.77e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.01e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.77e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.00e-15!83;UBERON:0002329!1.00e-15!83;UBERON:0003077!1.00e-15!83;UBERON:0003059!1.00e-15!83;UBERON:0007282!1.00e-15!83;UBERON:0009618!1.00e-15!83;UBERON:0007285!1.00e-15!83;UBERON:0005256!1.17e-15!143;UBERON:0002100!8.91e-15!216;UBERON:0000486!1.84e-14!82;UBERON:0000468!9.88e-14!659;UBERON:0002385!1.56e-13!63;UBERON:0001015!1.56e-13!63;UBERON:0000383!1.56e-13!63;UBERON:0001134!1.87e-13!61;UBERON:0002036!1.87e-13!61;UBERON:0003082!1.87e-13!61;UBERON:0000467!6.12e-13!625;UBERON:0004290!7.23e-13!70;UBERON:0000480!1.27e-12!626;UBERON:0004872!8.30e-12!84;UBERON:0000475!1.64e-11!365;UBERON:0003104!2.34e-11!238;UBERON:0009142!2.34e-11!238;UBERON:0003102!2.14e-10!95;UBERON:0000490!2.39e-10!138;UBERON:0003914!1.45e-09!118;UBERON:0001637!1.55e-09!42;UBERON:0003509!1.55e-09!42;UBERON:0004572!1.55e-09!42;UBERON:0000481!4.34e-09!347;UBERON:0001981!1.10e-08!60;UBERON:0007500!1.10e-08!60;UBERON:0004537!1.10e-08!60;UBERON:0006965!1.10e-08!60;UBERON:0002049!1.58e-08!79;UBERON:0007798!1.58e-08!79;UBERON:0004573!2.28e-08!33;UBERON:0004571!2.28e-08!33;UBERON:0000922!9.27e-08!612;UBERON:0000483!9.97e-08!309;UBERON:0000119!1.03e-07!312;UBERON:0000926!1.19e-07!448;UBERON:0004120!1.19e-07!448;UBERON:0006603!1.19e-07!448;UBERON:0002050!1.79e-07!605;UBERON:0005423!1.79e-07!605;UBERON:0000923!2.88e-07!604;UBERON:0005291!2.88e-07!604;UBERON:0006598!2.88e-07!604;UBERON:0002532!2.88e-07!604;UBERON:0000055!3.05e-07!69;UBERON:0005156!4.52e-07!59;UBERON:0000990!4.52e-07!59;UBERON:0000992!8.34e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.04e-08;33!UBERON:0004571;6.04e-08;33!UBERON:0002385;7.28e-08;31!UBERON:0001015;7.28e-08;31!UBERON:0000383;7.28e-08;31!UBERON:0001637;3.56e-07;42!UBERON:0003509;3.56e-07;42!UBERON:0004572;3.56e-07;42!UBERON:0000992;7.35e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,8.05e-15,83;UBERON:0003104,3.79e-14,160;UBERON:0009142,3.79e-14,160;UBERON:0002385,7.00e-14,64;UBERON:0001015,7.00e-14,64;UBERON:0000383,7.00e-14,64;UBERON:0001134,8.39e-14,62;UBERON:0002036,8.39e-14,62;UBERON:0003082,8.39e-14,62;UBERON:0002329,3.30e-13,71;UBERON:0003059,3.30e-13,71;UBERON:0007282,3.30e-13,71;UBERON:0004290,3.30e-13,71;UBERON:0009618,3.30e-13,71;UBERON:0005256,3.36e-13,122;UBERON:0003077,5.71e-13,72;UBERON:0007285,5.71e-13,72;UBERON:0007524,8.09e-13,73;UBERON:0002100,1.58e-12,199;UBERON:0003102,1.86e-11,99;UBERON:0004872,2.61e-11,83;UBERON:0007503,6.77e-11,78;UBERON:0000490,8.90e-11,148;UBERON:0003914,1.13e-09,117;UBERON:0001637,1.31e-09,42;UBERON:0003509,1.31e-09,42;UBERON:0004572,1.31e-09,42;UBERON:0004573,1.96e-08,33;UBERON:0004571,1.96e-08,33;UBERON:0007500,2.84e-08,59;UBERON:0001981,2.84e-08,59;UBERON:0004537,2.84e-08,59;UBERON:0006965,2.84e-08,59;UBERON:0002049,4.15e-08,78;UBERON:0007798,4.15e-08,78;UBERON:0000483,1.76e-07,306;UBERON:0000119,2.02e-07,309;UBERON:0005156,6.01e-07,59;UBERON:0000990,6.01e-07,59;UBERON:0000055,6.71e-07,68;UBERON:0000992,7.44e-07,13;UBERON:0007100,9.07e-07,27 | |||
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| |||
|short_description=p3@ITGB1 | |||
}} |
Latest revision as of 00:40, 18 September 2015
Short description: | p3@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITGB1_5end |
Coexpression cluster: | C3013_Smooth_Fibroblast_hepatic_mesenchymal_basal_spindle_Mesothelial |
Association with transcript: | 58bp_to_NM_002211, uc001iwt.3_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | P05556 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 7.36e-14 | 58 |
myoblast | 7.36e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.36e-14 | 58 |
embryonic cell | 1.11e-13 | 250 |
fibroblast | 5.98e-13 | 76 |
muscle cell | 1.67e-12 | 55 |
electrically responsive cell | 9.30e-12 | 61 |
electrically active cell | 9.30e-12 | 61 |
smooth muscle cell | 3.19e-10 | 43 |
smooth muscle myoblast | 3.19e-10 | 43 |
vascular associated smooth muscle cell | 4.10e-10 | 32 |
mesodermal cell | 5.98e-09 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.77e-09 | 14 |