FFCP PHASE1:Hg19::chr7:27135705..27135768,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:27135705..27135768,+
|short_description=p2@HOTAIRM1
|description=CAGE_peak_2_at_HOTAIRM1_5end
|association_with_transcript=0bp_to_ENST00000429611,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100506311 | |EntrezGene=100506311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=37117 | |HGNC=37117 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000429611,ENST00000434063,NR_038366,NR_038367,uc003syg.2_5end | |||
|cluster_id=chr7:27135705..27135768,+ | |||
|coexpression_cluster_id=C1317 | |||
|description=CAGE_peak_2_at_HOTAIRM1_5end | |||
|id=chr7:27135705..27135768,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.22e-43!140;CL:0000037!4.51e-35!172;CL:0000566!4.51e-35!172;CL:0002031!5.71e-35!124;CL:0002087!8.34e-35!119;CL:0000766!9.05e-34!76;CL:0002032!1.55e-33!165;CL:0000837!1.55e-33!165;CL:0000988!3.93e-32!182;CL:0000557!5.93e-29!71;CL:0002009!5.54e-28!65;CL:0002057!1.84e-27!42;CL:0002194!6.88e-27!63;CL:0000576!6.88e-27!63;CL:0000040!6.88e-27!63;CL:0000559!6.88e-27!63;CL:0000839!7.20e-27!70;CL:0000860!4.69e-26!45;CL:0000763!7.95e-25!112;CL:0000049!7.95e-25!112;CL:0000134!5.58e-14!358;CL:0002320!2.74e-13!365;CL:0000219!4.75e-10!390;CL:0000791!9.36e-09!18;CL:0000789!9.36e-09!18;CL:0002420!9.36e-09!18;CL:0002419!9.36e-09!18;CL:0000790!9.36e-09!18;CL:0000723!1.53e-08!436;CL:0000048!1.57e-08!430;CL:0000838!2.63e-08!52;CL:0000542!3.55e-08!53;CL:0000051!3.55e-08!53;CL:0000034!3.96e-08!444;CL:0002393!2.21e-07!9;CL:0002397!2.21e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.47e-20;33!CL:0002057;5.47e-20;33!CL:0000576;1.09e-17;48!CL:0000473;7.93e-17;39!CL:0000234;7.93e-17;39!CL:0000766;5.50e-16;69!CL:0002087;1.51e-10;104!CL:0000738;2.93e-10;136!CL:0000791;6.37e-09;18!CL:0000789;6.37e-09;18!CL:0002419;6.37e-09;18!CL:0000763;2.90e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.62e-46,136;CL:0000037,5.33e-37,168;CL:0002087,8.40e-37,115;CL:0002031,8.73e-37,120;CL:0000766,3.05e-36,72;CL:0002032,1.94e-35,161;CL:0000837,1.94e-35,161;CL:0000988,3.24e-34,177;CL:0000557,3.40e-31,67;CL:0002009,2.58e-30,61;CL:0002194,3.45e-29,59;CL:0000576,3.45e-29,59;CL:0000040,3.45e-29,59;CL:0000559,3.45e-29,59;CL:0000839,8.03e-29,66;CL:0000473,5.05e-28,48;CL:0000234,5.05e-28,48;CL:0000860,6.44e-28,42;CL:0002057,6.44e-28,42;CL:0000763,1.56e-26,108;CL:0000049,1.56e-26,108;CL:0000134,8.00e-15,354;CL:0002320,4.57e-14,361;CL:0000219,6.17e-11,386;CL:0000723,5.19e-09,433;CL:0000048,5.34e-09,427;CL:0000791,7.00e-09,18;CL:0000789,7.00e-09,18;CL:0002420,7.00e-09,18;CL:0002419,7.00e-09,18;CL:0000790,7.00e-09,18;CL:0000838,1.50e-08,52;CL:0000034,1.83e-08,441;CL:0000542,2.05e-08,53;CL:0000051,2.05e-08,53;CL:0002393,1.75e-07,9;CL:0002397,1.75e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.56e-20;42!CL:0000790;6.37e-09;18!CL:0000049;3.66e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.93e-36!102;UBERON:0003061!2.93e-36!102;UBERON:0002193!1.23e-34!112;UBERON:0002371!2.65e-29!80;UBERON:0001474!8.07e-27!86;UBERON:0002405!1.29e-18!115;UBERON:0004765!3.17e-18!101;UBERON:0001434!3.17e-18!101;UBERON:0002384!1.42e-13!375;UBERON:0003081!3.03e-13!216;UBERON:0002204!1.32e-09!167;UBERON:0000178!5.78e-08!15;UBERON:0000179!5.78e-08!15;UBERON:0000463!5.78e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.97e-08;15!UBERON:0000179;3.97e-08;15!UBERON:0000463;3.97e-08;15!UBERON:0002390;1.09e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.29e-38,98;UBERON:0003061,2.29e-38,98;UBERON:0002193,1.63e-36,108;UBERON:0002371,2.30e-31,76;UBERON:0002405,3.10e-29,93;UBERON:0001474,1.01e-28,82;UBERON:0004765,1.74e-24,90;UBERON:0001434,2.85e-19,100;UBERON:0002384,2.56e-14,371;UBERON:0003081,3.53e-14,203;UBERON:0000926,1.17e-09,315;UBERON:0004120,1.17e-09,315;UBERON:0006603,1.17e-09,315;UBERON:0002204,1.18e-09,167;UBERON:0000178,4.46e-08,15;UBERON:0000179,4.46e-08,15;UBERON:0000463,4.46e-08,15 | |||
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| ||
|short_description=p2@HOTAIRM1 | |||
}} | }} |
Latest revision as of 00:49, 18 September 2015
Short description: | p2@HOTAIRM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOTAIRM1_5end |
Coexpression cluster: | C1317_Eosinophils_CD14CD16_CD14_Neutrophils_Basophils_Peripheral_CD4 |
Association with transcript: | 0bp_to_ENST00000429611, ENST00000434063, NR_038366, NR_038367, uc003syg.2_5end |
EntrezGene: | HOTAIRM1 |
HGNC: | 37117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.29e-38 | 98 |
blood island | 2.29e-38 | 98 |
hemolymphoid system | 1.63e-36 | 108 |
bone marrow | 2.30e-31 | 76 |
immune system | 3.10e-29 | 93 |
bone element | 1.01e-28 | 82 |
skeletal element | 1.74e-24 | 90 |
skeletal system | 2.85e-19 | 100 |
connective tissue | 2.56e-14 | 371 |
lateral plate mesoderm | 3.53e-14 | 203 |
mesoderm | 1.17e-09 | 315 |
mesoderm-derived structure | 1.17e-09 | 315 |
presumptive mesoderm | 1.17e-09 | 315 |
musculoskeletal system | 1.18e-09 | 167 |
blood | 4.46e-08 | 15 |
haemolymphatic fluid | 4.46e-08 | 15 |
organism substance | 4.46e-08 | 15 |