FFCP PHASE1:Hg19::chr5:44809108..44809123,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10884 | |EntrezGene=10884 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8769 | |HGNC=8769 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BUN6 | |UniProt=Q9BUN6 | ||
|association_with_transcript=32bp_to_BC002460_5end | |association_with_transcript=32bp_to_BC002460_5end | ||
|cluster_id=chr5:44809108..44809123,+ | |||
|description=CAGE_peak_3_at_MRPS30_5end | |description=CAGE_peak_3_at_MRPS30_5end | ||
|id=chr5:44809108..44809123,+ | |id=chr5:44809108..44809123,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.47e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.24e-11,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.28e-12!239;DOID:162!1.24e-11!235;DOID:305!5.71e-08!106;DOID:0050687!3.52e-07!143 | |ontology_enrichment_disease=DOID:14566!4.28e-12!239;DOID:162!1.24e-11!235;DOID:305!5.71e-08!106;DOID:0050687!3.52e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!8.02e-12!32;UBERON:0001893!4.57e-11!34;UBERON:0002020!8.85e-11!34;UBERON:0003528!8.85e-11!34;UBERON:0002619!1.70e-10!22;UBERON:0002791!1.92e-10!33;UBERON:0000956!2.16e-10!25;UBERON:0000203!2.16e-10!25;UBERON:0002780!1.66e-09!41;UBERON:0001890!1.66e-09!41;UBERON:0006240!1.66e-09!41;UBERON:0001950!1.85e-09!20;UBERON:0003080!5.42e-09!42;UBERON:0001017!1.81e-08!82;UBERON:0005743!8.53e-08!86;UBERON:0001737!1.05e-07!9;UBERON:0000073!1.10e-07!94;UBERON:0001016!1.10e-07!94;UBERON:0001049!4.05e-07!57;UBERON:0005068!4.05e-07!57;UBERON:0006241!4.05e-07!57;UBERON:0007135!4.05e-07!57 | |ontology_enrichment_uberon=UBERON:0001869!8.02e-12!32;UBERON:0001893!4.57e-11!34;UBERON:0002020!8.85e-11!34;UBERON:0003528!8.85e-11!34;UBERON:0002619!1.70e-10!22;UBERON:0002791!1.92e-10!33;UBERON:0000956!2.16e-10!25;UBERON:0000203!2.16e-10!25;UBERON:0002780!1.66e-09!41;UBERON:0001890!1.66e-09!41;UBERON:0006240!1.66e-09!41;UBERON:0001950!1.85e-09!20;UBERON:0003080!5.42e-09!42;UBERON:0001017!1.81e-08!82;UBERON:0005743!8.53e-08!86;UBERON:0001737!1.05e-07!9;UBERON:0000073!1.10e-07!94;UBERON:0001016!1.10e-07!94;UBERON:0001049!4.05e-07!57;UBERON:0005068!4.05e-07!57;UBERON:0006241!4.05e-07!57;UBERON:0007135!4.05e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000200;2.05e-15;6!UBERON:0001950;2.37e-15;20!UBERON:0001737;3.34e-14;9!UBERON:0001557;3.34e-14;9!UBERON:0001869;5.01e-14;32!UBERON:0002619;7.65e-14;22!UBERON:0001893;2.33e-13;34!UBERON:0002791;1.26e-12;32!UBERON:0000956;5.13e-12;25!UBERON:0000203;5.13e-12;25!UBERON:0001870;9.81e-12;3!UBERON:0003528;1.13e-10;34!UBERON:0002020;1.13e-10;34!UBERON:0002780;9.86e-09;41!UBERON:0001890;9.86e-09;41!UBERON:0002702;1.54e-08;2!UBERON:0001017;3.86e-07;75!UBERON:0002021;6.18e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.74e-17,81;UBERON:0001869,1.93e-15,32;UBERON:0000200,3.75e-15,6;UBERON:0001950,4.11e-15,20;UBERON:0001016,4.82e-15,89;UBERON:0001737,1.07e-14,9;UBERON:0001893,2.15e-14,34;UBERON:0002619,1.26e-13,22;UBERON:0002780,1.36e-13,41;UBERON:0001890,1.36e-13,41;UBERON:0003080,1.36e-13,41;UBERON:0006240,1.36e-13,41;UBERON:0002791,4.98e-13,32;UBERON:0003528,3.87e-12,34;UBERON:0002020,3.87e-12,34;UBERON:0000956,7.90e-12,25;UBERON:0000203,7.90e-12,25;UBERON:0000073,1.95e-11,53;UBERON:0002616,1.95e-11,53;UBERON:0001870,3.85e-11,3;UBERON:0000955,9.15e-11,68;UBERON:0006238,9.15e-11,68;UBERON:0001049,1.17e-10,56;UBERON:0005068,1.17e-10,56;UBERON:0006241,1.17e-10,56;UBERON:0007135,1.17e-10,56;UBERON:0003056,1.37e-09,61;UBERON:0011216,9.79e-09,223;UBERON:0003075,1.58e-08,82;UBERON:0007284,1.58e-08,82;UBERON:0002702,3.25e-08,2;UBERON:0002346,5.77e-08,86;UBERON:0002021,5.66e-07,5 | |||
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| ||
|short_description=p3@MRPS30 | |short_description=p3@MRPS30 | ||
}} | }} |
Latest revision as of 01:08, 18 September 2015
Short description: | p3@MRPS30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MRPS30_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_BC002460_5end |
EntrezGene: | MRPS30 |
HGNC: | 8769 |
UniProt: | Q9BUN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.24e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.74e-17 | 81 |
cerebral hemisphere | 1.93e-15 | 32 |
gyrus | 3.75e-15 | 6 |
neocortex | 4.11e-15 | 20 |
nervous system | 4.82e-15 | 89 |
larynx | 1.07e-14 | 9 |
telencephalon | 2.15e-14 | 34 |
regional part of cerebral cortex | 1.26e-13 | 22 |
regional part of forebrain | 1.36e-13 | 41 |
forebrain | 1.36e-13 | 41 |
anterior neural tube | 1.36e-13 | 41 |
future forebrain | 1.36e-13 | 41 |
regional part of telencephalon | 4.98e-13 | 32 |
brain grey matter | 3.87e-12 | 34 |
gray matter | 3.87e-12 | 34 |
cerebral cortex | 7.90e-12 | 25 |
pallium | 7.90e-12 | 25 |
regional part of nervous system | 1.95e-11 | 53 |
regional part of brain | 1.95e-11 | 53 |
frontal cortex | 3.85e-11 | 3 |
brain | 9.15e-11 | 68 |
future brain | 9.15e-11 | 68 |
neural tube | 1.17e-10 | 56 |
neural rod | 1.17e-10 | 56 |
future spinal cord | 1.17e-10 | 56 |
neural keel | 1.17e-10 | 56 |
pre-chordal neural plate | 1.37e-09 | 61 |
organ system subdivision | 9.79e-09 | 223 |
neural plate | 1.58e-08 | 82 |
presumptive neural plate | 1.58e-08 | 82 |
middle frontal gyrus | 3.25e-08 | 2 |
neurectoderm | 5.77e-08 | 86 |
occipital lobe | 5.66e-07 | 5 |