FFCP PHASE1:Hg19::chr13:78493657..78493668,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1910 | |EntrezGene=1910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3180 | |HGNC=3180 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-132bp_to_uc010afa.1_5end | |association_with_transcript=-132bp_to_uc010afa.1_5end | ||
|cluster_id=chr13:78493657..78493668,- | |||
|coexpression_cluster_id=C1191 | |||
|description=CAGE_peak_8_at_EDNRB_5end | |description=CAGE_peak_8_at_EDNRB_5end | ||
|id=chr13:78493657..78493668,- | |id=chr13:78493657..78493668,- | ||
|ontology_enrichment_celltype=CL:0000148!2.14e-17!10;CL:0000541!2.14e-17!10;CL:0000147!1.26e-11!14;CL:0002322!9.10e-08!5;CL:0000325!1.27e-07!39;CL:0000710!2.36e-07!20;CL:0002567!8.96e-07!3 | |ontology_enrichment_celltype=CL:0000148!2.14e-17!10;CL:0000541!2.14e-17!10;CL:0000147!1.26e-11!14;CL:0002322!9.10e-08!5;CL:0000325!1.27e-07!39;CL:0000710!2.36e-07!20;CL:0002567!8.96e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.39e-48;10!CL:0000147;2.16e-34;14!CL:0002567;1.57e-30;3!CL:0000710;6.60e-24;20!CL:0000047;5.19e-21;2!CL:0000075;1.50e-17;27!CL:0002077;2.86e-12;34!CL:0002566;3.28e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.77e-48,10;CL:0000541,2.77e-48,10;CL:0000147,2.39e-34,14;CL:0002567,6.66e-31,3;CL:0000710,7.09e-24,20;CL:0000075,1.58e-17,27;CL:0002077,8.76e-14,34;CL:0000133,4.32e-12,59;CL:0002566,6.00e-11,1;CL:0000333,9.34e-11,41;CL:0000221,9.34e-10,72 | |||
|ontology_enrichment_development_v019=CL:0000133;1.28e-07;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.95e-34!57;UBERON:0005068!8.95e-34!57;UBERON:0006241!8.95e-34!57;UBERON:0007135!8.95e-34!57;UBERON:0007023!1.66e-32!115;UBERON:0001017!6.77e-30!82;UBERON:0005743!1.41e-29!86;UBERON:0002616!4.04e-28!59;UBERON:0000073!6.49e-27!94;UBERON:0001016!6.49e-27!94;UBERON:0002020!4.37e-25!34;UBERON:0003528!4.37e-25!34;UBERON:0002780!6.39e-25!41;UBERON:0001890!6.39e-25!41;UBERON:0006240!6.39e-25!41;UBERON:0001893!2.05e-24!34;UBERON:0003080!4.00e-24!42;UBERON:0000955!1.80e-23!69;UBERON:0006238!1.80e-23!69;UBERON:0002791!2.03e-23!33;UBERON:0003075!3.21e-22!86;UBERON:0007284!3.21e-22!86;UBERON:0001869!7.49e-22!32;UBERON:0002346!1.14e-20!90;UBERON:0003056!1.46e-16!61;UBERON:0002308!3.05e-15!9;UBERON:0000125!3.05e-15!9;UBERON:0002420!8.25e-15!9;UBERON:0007245!8.25e-15!9;UBERON:0010009!8.25e-15!9;UBERON:0010011!8.25e-15!9;UBERON:0000454!8.25e-15!9;UBERON:0004121!8.07e-14!169;UBERON:0002619!1.01e-13!22;UBERON:0000956!2.45e-13!25;UBERON:0000203!2.45e-13!25;UBERON:0001950!3.19e-13!20;UBERON:0000924!3.65e-13!173;UBERON:0006601!3.65e-13!173;UBERON:0000153!1.79e-12!129;UBERON:0007811!1.79e-12!129;UBERON:0000033!4.22e-12!123;UBERON:0009663!5.65e-12!7;UBERON:0002298!3.97e-11!8;UBERON:0003076!1.06e-10!15;UBERON:0003057!1.06e-10!15;UBERON:0001871!1.36e-09!7;UBERON:0000025!1.42e-09!194;UBERON:0004733!7.60e-09!12;UBERON:0002028!7.60e-09!12;UBERON:0007277!7.60e-09!12;UBERON:0004111!3.07e-08!241;UBERON:0004732!5.07e-08!13;UBERON:0000369!2.65e-07!4;UBERON:0002435!2.65e-07!4;UBERON:0000204!2.65e-07!4;UBERON:0010082!2.65e-07!4;UBERON:0000483!7.66e-07!309;UBERON:0000477!9.70e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.51e-15;6!UBERON:0001896;2.42e-14;3!UBERON:0005290;2.42e-14;3!UBERON:0000125;1.92e-10;9!UBERON:0002308;1.92e-10;9!UBERON:0004733;4.80e-08;12!UBERON:0002028;4.80e-08;12!UBERON:0004732;1.83e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.17e-15,6;UBERON:0001896,2.42e-14,3;UBERON:0005290,2.42e-14,3;UBERON:0010096,2.42e-14,3;UBERON:0003076,5.48e-11,15;UBERON:0003057,5.48e-11,15;UBERON:0000125,1.74e-10,9;UBERON:0002308,1.74e-10,9;UBERON:0001017,1.64e-08,81;UBERON:0004733,4.25e-08,12;UBERON:0002028,4.25e-08,12;UBERON:0007277,4.25e-08,12;UBERON:0001049,7.08e-08,56;UBERON:0005068,7.08e-08,56;UBERON:0006241,7.08e-08,56;UBERON:0007135,7.08e-08,56;UBERON:0001016,1.47e-07,89;UBERON:0004732,1.64e-07,13;UBERON:0003075,9.94e-07,82;UBERON:0007284,9.94e-07,82 | |||
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| ||
|short_description=p8@EDNRB | |short_description=p8@EDNRB | ||
}} | }} |
Latest revision as of 01:55, 18 September 2015
Short description: | p8@EDNRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_EDNRB_5end |
Coexpression cluster: | C1191_Melanocyte_retina_spinal_locus_medulla_teratocarcinoma_sacrococcigeal |
Association with transcript: | -132bp_to_uc010afa.1_5end |
EntrezGene: | EDNRB |
HGNC: | 3180 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.77e-48 | 10 |
melanoblast | 2.77e-48 | 10 |
pigment cell | 2.39e-34 | 14 |
light melanocyte | 6.66e-31 | 3 |
neurecto-epithelial cell | 7.09e-24 | 20 |
columnar/cuboidal epithelial cell | 1.58e-17 | 27 |
ecto-epithelial cell | 8.76e-14 | 34 |
neurectodermal cell | 4.32e-12 | 59 |
dark melanocyte | 6.00e-11 | 1 |
migratory neural crest cell | 9.34e-11 | 41 |
ectodermal cell | 9.34e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
brainstem | 1.17e-15 | 6 |
medulla oblongata | 2.42e-14 | 3 |
myelencephalon | 2.42e-14 | 3 |
future myelencephalon | 2.42e-14 | 3 |
posterior neural tube | 5.48e-11 | 15 |
chordal neural plate | 5.48e-11 | 15 |
neural nucleus | 1.74e-10 | 9 |
nucleus of brain | 1.74e-10 | 9 |
central nervous system | 1.64e-08 | 81 |
segmental subdivision of hindbrain | 4.25e-08 | 12 |
hindbrain | 4.25e-08 | 12 |
presumptive hindbrain | 4.25e-08 | 12 |
neural tube | 7.08e-08 | 56 |
neural rod | 7.08e-08 | 56 |
future spinal cord | 7.08e-08 | 56 |
neural keel | 7.08e-08 | 56 |
nervous system | 1.47e-07 | 89 |
segmental subdivision of nervous system | 1.64e-07 | 13 |
neural plate | 9.94e-07 | 82 |
presumptive neural plate | 9.94e-07 | 82 |