FFCP PHASE1:Hg19::chr11:46316699..46316719,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90993 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18856 | |||
|TSSclassifier=strong | |||
|UniProt=E9PK33 | |||
|association_with_transcript=22bp_to_ENST00000534787_5end | |||
|cluster_id=chr11:46316699..46316719,+ | |||
|description=CAGE_peak_10_at_CREB3L1_5end | |||
|id=chr11:46316699..46316719,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.43e-42!180;CL:0000057!7.76e-32!75;CL:0000048!4.65e-14!430;CL:0000723!2.37e-13!436;CL:0000144!4.88e-13!625;CL:0000034!7.71e-13!444;CL:0002620!7.96e-13!23;CL:0002371!2.25e-12!591;CL:0002334!1.22e-09!12;CL:0000548!2.20e-09!679;CL:0000004!2.20e-09!679;CL:0000255!2.20e-09!679;CL:0000219!3.73e-09!390;CL:0000012!3.95e-09!682;CL:0000134!3.75e-08!358;CL:0000062!4.69e-08!11;CL:0000375!4.69e-08!11;CL:0000335!4.69e-08!11;CL:0002320!8.16e-08!365;CL:0000680!2.95e-07!57;CL:0000056!2.95e-07!57;CL:0000355!2.95e-07!57;CL:0000183!8.06e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002569;4.80e-13;6!CL:0002620;5.61e-13;23!CL:0000062;2.53e-12;9!CL:0002570;1.05e-09;8!CL:0002320;3.05e-08;188!CL:1000306;1.71e-07;4!CL:0002547;1.71e-07;4!CL:0000048;2.09e-07;58!CL:0000134;2.23e-07;55!CL:0000349;3.76e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.77e-18,76;CL:0000062,1.33e-13,11;CL:0000375,1.33e-13,11;CL:0000335,1.33e-13,11;CL:0000048,1.40e-13,427;CL:0000723,3.26e-13,433;CL:0002569,3.61e-13,6;CL:0002620,4.68e-13,23;CL:0000034,9.75e-13,441;CL:0000134,1.29e-12,354;CL:0002320,3.86e-12,361;CL:0000219,1.80e-10,386;CL:0002570,1.09e-09,8;CL:1000306,1.21e-07,4;CL:0002547,1.21e-07,4;CL:0000349,2.85e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000335;1.35e-13;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.10e-09!83;UBERON:0002329!1.10e-09!83;UBERON:0003077!1.10e-09!83;UBERON:0003059!1.10e-09!83;UBERON:0007282!1.10e-09!83;UBERON:0009618!1.10e-09!83;UBERON:0007285!1.10e-09!83;UBERON:0002199!3.08e-09!45;UBERON:0002416!3.08e-09!45;UBERON:0003102!3.81e-09!95;UBERON:0002384!2.83e-08!375;UBERON:0002097!3.14e-08!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;1.07e-15;7!UBERON:0009142;1.07e-15;7!UBERON:0003422;4.80e-13;6!UBERON:0002331;1.07e-07;10!UBERON:0001013;1.21e-07;14!UBERON:0004797;1.71e-07;4!UBERON:0000415;1.71e-07;4!UBERON:0007240;1.71e-07;4!UBERON:0005742;1.71e-07;4!UBERON:0005734;1.71e-07;4!UBERON:0004664;1.71e-07;4!UBERON:0004663;1.71e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,3.61e-13,6;UBERON:0002384,1.71e-11,371;UBERON:0002199,4.98e-08,46;UBERON:0002416,4.98e-08,46;UBERON:0002331,9.10e-08,10;UBERON:0000358,9.10e-08,10;UBERON:0000307,9.10e-08,10;UBERON:0000091,9.10e-08,10;UBERON:0000087,9.10e-08,10;UBERON:0007010,9.10e-08,10;UBERON:0007806,9.10e-08,10;UBERON:0008780,9.10e-08,10;UBERON:0005728,9.10e-08,10;UBERON:0002097,9.40e-08,41;UBERON:0001013,1.21e-07,14;UBERON:0000415,1.21e-07,4;UBERON:0007240,1.21e-07,4;UBERON:0005742,1.21e-07,4;UBERON:0005734,1.21e-07,4;UBERON:0004664,1.21e-07,4;UBERON:0004663,1.21e-07,4 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,1.0007329835313,0,0,2.53299878168311,0,0,0.737201809504527,0,0.436882744260345,0.791300934685361,0.123766352960047,0,0.672325146451775,0,0,0,0.369363174230364,0.408001382488506,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0.50133791063589,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.759783069987479,1.58891016975863,1.14734648299525,1.41867352879343,0.560677600142307,0,0.98667019366864,0.311211035399766,0.134710672069688,0.326923806226917,0.302714855289863,0,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0.989067717114227,0.910161361938026,1.43723628363248,0.336672227908132,0.250237039743928,0.277064115484183,3.95079858792754,0.612975591598039,1.50238058906597,0.794025282120147,6.45802688479903,0.213557388818567,0.423863802319124,5.40163972951924,1.13357782162283,3.86460810068444,0.744467425326359,7.08860595413318,1.65642908774038,9.08761587278812,0.736399189138395,0,13.1353549231147,2.41805035746337,2.37384829234683,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03417372606222,3.57656445851882,0,0.531876233169741,0,0.514414748524284,5.67396528093113,1.0656887160644,0.142977993658148,1.62786481617433,3.29296134712308,0,0,0,0,0,0.099972991182057,0,0,0,1.67737398844108,1.14861935834114,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,1.60586089917446,0.946214490203608,0,1.20378439891088,0,1.03473071292505,5.31380478828349,1.47495334833363,0.0868836144680828,0,0,0,0,0,0.606255142892519,1.66435439510497,1.20956117331872,1.24053903909388,0.460385919864187,0.561320188866147,0.512556597022804,1.02341449813341,3.86049410744658,0,0.771048469013278,0.177561725313127,0.739144404124282,1.03850885836724,1.04589340613963,0,0,0,2.18147451512753,0.728364672026868,0.393373244878272,0,0,0,0,0,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0.650756789328606,0,2.83865340936865,1.56768049849117,0,0,0,0.193341436584244,0,0,0.275673144969061,0.107420244868274,0.145016693914229,0,1.4245125703478,0,0,0,0,0.464845549297286,8.18512101759664,2.0911118104818,0.616067160352178,1.06461206063404,0,0,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,0,0.719489830333259,0.274537029736055,0.471249609382746,0.808729926293264,0,0,0,0,0,0.818999468447914,1.1312434556297,0,2.2054613741845,0,0,0.578775534266688,0,0,0.30982349809975,0.845086807596724,0.143411352204052,0.294747123039363,1.07001315444375,0,0,0.329294892959902,0.75894634753143,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.480952921509202,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0.305994652908965,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0,0,0,0,0.25426853765475,0.542999601753713,3.45688596480507,0.653174720218818,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895528817321244,1.8697064787778,1.10961172300523,0,0,0.889811221596536,0.457680136793847,0,1.24349760466224,0.295710299979268,0.796483835818512,0,0.776314784381297,0,1.06336685823198,0,0.150257608997218,0.380805212168795,0.406870733204662,0.363697318405119,0,0,0.796191777397232,3.20022211730523,1.03018711554838,1.34699795506368,0,0,0,0,0.906823702049089,1.389134845943,0.244736704506468,0.179088841081487,0,0.877136198314828,0,0.771656153083659,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.05802783107205,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,3.05105676373734,0,0.596748666348824,0.0752103283492573,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.849635573439084,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p10@CREB3L1 | |||
}} |
Latest revision as of 02:10, 18 September 2015
Short description: | p10@CREB3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CREB3L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000534787_5end |
EntrezGene: | CREB3L1 |
HGNC: | 18856 |
UniProt: | E9PK33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.77e-18 | 76 |
osteoblast | 1.33e-13 | 11 |
osteoprogenitor cell | 1.33e-13 | 11 |
mesenchyme condensation cell | 1.33e-13 | 11 |
multi fate stem cell | 1.40e-13 | 427 |
somatic stem cell | 3.26e-13 | 433 |
mesenchymal stem cell of umbilical cord | 3.61e-13 | 6 |
skin fibroblast | 4.68e-13 | 23 |
stem cell | 9.75e-13 | 441 |
mesenchymal cell | 1.29e-12 | 354 |
connective tissue cell | 3.86e-12 | 361 |
motile cell | 1.80e-10 | 386 |
mesenchymal stem cell of adipose | 1.09e-09 | 8 |
fibroblast of tunica adventitia of artery | 1.21e-07 | 4 |
fibroblast of the aortic adventitia | 1.21e-07 | 4 |
extraembryonic cell | 2.85e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 3.61e-13 | 6 |
connective tissue | 1.71e-11 | 371 |
integument | 4.98e-08 | 46 |
integumental system | 4.98e-08 | 46 |
umbilical cord | 9.10e-08 | 10 |
blastocyst | 9.10e-08 | 10 |
blastula | 9.10e-08 | 10 |
bilaminar disc | 9.10e-08 | 10 |
inner cell mass | 9.10e-08 | 10 |
cleaving embryo | 9.10e-08 | 10 |
connecting stalk | 9.10e-08 | 10 |
inner cell mass derived epiblast | 9.10e-08 | 10 |
extraembryonic mesoderm | 9.10e-08 | 10 |
skin of body | 9.40e-08 | 41 |
adipose tissue | 1.21e-07 | 14 |
artery wall | 1.21e-07 | 4 |
tunica adventitia of artery | 1.21e-07 | 4 |
adventitia | 1.21e-07 | 4 |
tunica adventitia of blood vessel | 1.21e-07 | 4 |
aorta tunica adventitia | 1.21e-07 | 4 |
aorta wall | 1.21e-07 | 4 |