FFCP PHASE1:Hg19::chr6:32410239..32410261,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3122 | |EntrezGene=3122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4947 | |HGNC=4947 | ||
|TSSclassifier=strong | |||
|UniProt=P01903 | |UniProt=P01903 | ||
|association_with_transcript=5bp_to_V00523_5end | |association_with_transcript=5bp_to_V00523_5end | ||
|cluster_id=chr6:32410239..32410261,+ | |||
|coexpression_cluster_id=C187 | |coexpression_cluster_id=C187 | ||
|description=CAGE_peak_3_at_HLA-DRA_5end | |description=CAGE_peak_3_at_HLA-DRA_5end | ||
|id=chr6:32410239..32410261,+ | |id=chr6:32410239..32410261,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.14e-62!140;CL:0002087!8.73e-60!119;CL:0000037!8.63e-55!172;CL:0000566!8.63e-55!172;CL:0002031!1.34e-54!124;CL:0000988!2.04e-51!182;CL:0002032!4.94e-51!165;CL:0000837!4.94e-51!165;CL:0002009!3.64e-46!65;CL:0002194!5.82e-44!63;CL:0000576!5.82e-44!63;CL:0000040!5.82e-44!63;CL:0000559!5.82e-44!63;CL:0000557!2.07e-41!71;CL:0002057!6.22e-41!42;CL:0000839!2.15e-38!70;CL:0000766!3.30e-38!76;CL:0000860!6.11e-37!45;CL:0000763!4.63e-34!112;CL:0000049!4.63e-34!112;CL:0000945!2.15e-17!24;CL:0000826!2.15e-17!24;CL:0000542!1.30e-14!53;CL:0000051!1.30e-14!53;CL:0000838!4.37e-14!52;CL:0000451!3.99e-12!10;CL:0000236!5.31e-12!14;CL:0000990!1.21e-10!8;CL:0000134!2.28e-09!358;CL:0002320!1.35e-08!365;CL:0002393!2.28e-08!9;CL:0002397!2.28e-08!9;CL:0000840!1.25e-07!5;CL:0001029!1.25e-07!5;CL:0000453!9.11e-07!5 | |ontology_enrichment_celltype=CL:0000738!5.14e-62!140;CL:0002087!8.73e-60!119;CL:0000037!8.63e-55!172;CL:0000566!8.63e-55!172;CL:0002031!1.34e-54!124;CL:0000988!2.04e-51!182;CL:0002032!4.94e-51!165;CL:0000837!4.94e-51!165;CL:0002009!3.64e-46!65;CL:0002194!5.82e-44!63;CL:0000576!5.82e-44!63;CL:0000040!5.82e-44!63;CL:0000559!5.82e-44!63;CL:0000557!2.07e-41!71;CL:0002057!6.22e-41!42;CL:0000839!2.15e-38!70;CL:0000766!3.30e-38!76;CL:0000860!6.11e-37!45;CL:0000763!4.63e-34!112;CL:0000049!4.63e-34!112;CL:0000945!2.15e-17!24;CL:0000826!2.15e-17!24;CL:0000542!1.30e-14!53;CL:0000051!1.30e-14!53;CL:0000838!4.37e-14!52;CL:0000451!3.99e-12!10;CL:0000236!5.31e-12!14;CL:0000990!1.21e-10!8;CL:0000134!2.28e-09!358;CL:0002320!1.35e-08!365;CL:0002393!2.28e-08!9;CL:0002397!2.28e-08!9;CL:0000840!1.25e-07!5;CL:0001029!1.25e-07!5;CL:0000453!9.11e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.88e-57;33!CL:0002057;5.88e-57;33!CL:0000473;2.16e-56;39!CL:0000234;2.16e-56;39!CL:0000576;9.85e-46;48!CL:0000766;1.16e-32;69!CL:0000738;6.25e-22;136!CL:0000945;7.58e-22;24!CL:0000451;1.26e-21;10!CL:0002087;7.91e-21;104!CL:0000236;4.88e-20;13!CL:0000990;9.65e-19;8!CL:0000763;6.07e-16;100!CL:0000840;4.59e-13;5!CL:0000235;3.65e-12;6!CL:0000453;2.14e-11;5!CL:0000988;2.70e-11;177!CL:0000219;8.06e-10;193!CL:0002393;9.88e-08;6!CL:0002397;9.88e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,8.15e-92,61;CL:0000738,1.63e-88,136;CL:0002194,1.54e-87,59;CL:0000576,1.54e-87,59;CL:0000040,1.54e-87,59;CL:0000559,1.54e-87,59;CL:0000473,2.12e-84,48;CL:0000234,2.12e-84,48;CL:0000557,3.69e-82,67;CL:0002087,4.36e-81,115;CL:0002031,1.86e-77,120;CL:0000766,3.58e-77,72;CL:0000839,1.31e-76,66;CL:0000860,3.93e-73,42;CL:0002057,3.93e-73,42;CL:0000037,2.61e-71,168;CL:0002032,1.83e-67,161;CL:0000837,1.83e-67,161;CL:0000988,1.52e-66,177;CL:0000763,2.99e-61,108;CL:0000049,2.99e-61,108;CL:0000134,4.93e-22,354;CL:0000945,6.33e-22,24;CL:0000826,6.33e-22,24;CL:0000236,9.48e-22,14;CL:0000451,1.78e-21,10;CL:0002320,3.56e-21,361;CL:0000990,1.12e-18,8;CL:0000219,3.70e-18,386;CL:0000034,3.29e-15,441;CL:0000048,3.99e-15,427;CL:0000723,1.31e-14,433;CL:0000840,5.26e-13,5;CL:0001029,5.26e-13,5;CL:0000235,3.42e-12,6;CL:0002393,7.82e-12,9;CL:0002397,7.82e-12,9;CL:0000453,2.19e-11,5;CL:0000838,1.75e-08,52;CL:0000542,3.10e-08,53;CL:0000051,3.10e-08,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.55e-52;42!CL:0000049;1.82e-18;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.24e-42!102;UBERON:0003061!1.24e-42!102;UBERON:0002193!8.41e-39!112;UBERON:0002371!2.88e-36!80;UBERON:0001474!4.89e-32!86;UBERON:0002405!1.04e-27!115;UBERON:0004765!8.63e-24!101;UBERON:0001434!8.63e-24!101;UBERON:0007023!4.82e-23!115;UBERON:0003081!8.84e-12!216;UBERON:0002204!2.89e-08!167;UBERON:0002384!6.83e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!1.24e-42!102;UBERON:0003061!1.24e-42!102;UBERON:0002193!8.41e-39!112;UBERON:0002371!2.88e-36!80;UBERON:0001474!4.89e-32!86;UBERON:0002405!1.04e-27!115;UBERON:0004765!8.63e-24!101;UBERON:0001434!8.63e-24!101;UBERON:0007023!4.82e-23!115;UBERON:0003081!8.84e-12!216;UBERON:0002204!2.89e-08!167;UBERON:0002384!6.83e-08!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.66e-70,76;UBERON:0001474,3.78e-64,82;UBERON:0002390,2.27e-57,98;UBERON:0003061,2.27e-57,98;UBERON:0004765,5.54e-57,90;UBERON:0002405,8.36e-57,93;UBERON:0002193,1.95e-52,108;UBERON:0001434,1.24e-49,100;UBERON:0002204,3.00e-24,167;UBERON:0003081,1.18e-23,203;UBERON:0002384,5.26e-20,371;UBERON:0000926,7.27e-10,315;UBERON:0004120,7.27e-10,315;UBERON:0006603,7.27e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,3.05653622991805,1.80621296789881,2.51874500203774,2.75354993794233,1.53531759238885,1.85779347979291,0,0,0,0.0774672005803016,0.284338464974843,0.293600439334847,0.553995408531877,2.20598892217156,1.95309783644267,1.56740831967947,3.2389366601898,2.06060454107349,5.52513307362346,8.31327076115381,7.76268995801012,9.52959051313307,9.86802931252382,12.6979612066992,8.05538698502021,12.0395532068677,8.0403958162119,8.27389633767885,7.10033151942209,6.77132432971709,7.34145124216158,11.1891521523717,8.98893937780339,11.6311879100943,4.49300637906531,12.7867425159808,8.2462825046679,10.5715738539465,8.09827026012119,8.41606792022894,11.3477044938228,8.71951148593805,8.29120595347253,12.5155900420848,9.55630916702513,8.47559303686716,5.15588690382591,11.7091083353127,5.49263744411049,3.18906449947565,5.45112478321777,1.79725809834392,2.70318407114711,1.28580469357664,2.28010194992999,1.19350006319454,1.82664153764634,3.51992488922645,7.09980194640771,11.5636203002262,2.98711155796555,5.20514783146816,6.8970292794538,7.27149360063348,7.63243003628291,7.96898156753228,4.69789751496751,6.49864487812889,0,2.24203425192614,1.05353633910031,0,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0.383959833463255,0,0.473554504088034,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,11.0346113842592,8.00996791576629,16.3538291438204,2.62339686735876,1.14398982156026,4.45749001595478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46217006087397,1.8720341211139,8.17471392588005,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.378615870531,7.03159928004977,40.058448501776,0,0,0,0,0,0,0.336255431980582,0,0.215627574859517,0.641715181398742,0,0,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,4.74571241800957,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0.569647187174163,0.476463550915578,0,0.648473311192717,0.540031437238115,2.37937552888281,0,0,0,0.743212700502875,0,0,0,0.399158742865633,0.383010740264733,0,0,2.24637742490767,0.228234679033192,0,0,0.169291777801603,0,0.605399121573143,2.98092366383228,0.343505344755765,0.307240764308458,0,0,0.781552381608161,0,0,0,0,0,0,0.439524537815682,0,0.66866030566487,0,0.23874448473769,0,0,0,0.422008249231538,0,0.988823245360557,0,0.996239941255349,1.93398740871803,0,0,0.369254416383208,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.619202951523374,1.22206028986725,0,0.370691816839509,0.313265848516366,0.337005664903385,0,0,3.46664099509765,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.581934098930517,0,0.451961481561065,0,0,0,0,0,0.85381197895741,0,0,0,0,0.432164393964449,0,0,0,0,0,0,0,0.821432273351958,0,0.429765441419957,0.525774708558629,0,0.229160424011684,0.717873024576814,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,1.18542664892098,0.795229689809303,0.272406812223151,0,0,0,10.348799011369,17.7974449548328,0.121499113316049,0,0.709251365692784,0.104909176269996,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.258565912723101,0.66116300871345,0,0,2.13574825135389,0.314408610199332,12.4271716604159,2.48083010905975,0,0.487170393523584,0,0,0.2506898940227,0,0,0,0.886068179966986,0.366078794705889,0.500763722825999,2.86704597845036,0.443716206147409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,18.3168690309025,8.23762009942851,7.36044274151299,0,0,0,1.19992437512958,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,1.09651553371436,1.48863353516788,0,0,1.07140367175657,0.336283722218824,0.606965604236632,0,0,4.14842355200805,0.171488009437418,0.0679697329768317,0,0,0,0.39246546425257,0.314231179832004,0,0.913158720509496,0,0,0.428859265059938,0,0,0,0,0,0,0,0.430227358820278,0,0,1.27016115057279,0.4582137370881,0,0,0,0.098150233615243,0,0,0.205325613712494,0,0.971421986118279,0,0,0,0,0,0,1.54348316215889,0.874238242015829,0,0.2451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| ||
|short_description=p3@HLA-DRA | |short_description=p3@HLA-DRA | ||
}} | }} |
Latest revision as of 02:52, 18 September 2015
Short description: | p3@HLA-DRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HLA-DRA_5end |
Coexpression cluster: | C187_migratory_immature_Dendritic_CD19_CD14_Monocytederived_Macrophage |
Association with transcript: | 5bp_to_V00523_5end |
EntrezGene: | HLA-DRA |
HGNC: | 4947 |
UniProt: | P01903 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.66e-70 | 76 |
bone element | 3.78e-64 | 82 |
hematopoietic system | 2.27e-57 | 98 |
blood island | 2.27e-57 | 98 |
skeletal element | 5.54e-57 | 90 |
immune system | 8.36e-57 | 93 |
hemolymphoid system | 1.95e-52 | 108 |
skeletal system | 1.24e-49 | 100 |
musculoskeletal system | 3.00e-24 | 167 |
lateral plate mesoderm | 1.18e-23 | 203 |
connective tissue | 5.26e-20 | 371 |
mesoderm | 7.27e-10 | 315 |
mesoderm-derived structure | 7.27e-10 | 315 |
presumptive mesoderm | 7.27e-10 | 315 |