FFCP PHASE1:Hg19::chr1:160681693..160681719,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:160681693..160681719,- to FFCP PHASE1:Hg19::chr1:160681693..160681719,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=962 | |EntrezGene=962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1683 | |HGNC=1683 | ||
|TSSclassifier=strong | |||
|UniProt=P09326 | |UniProt=P09326 | ||
|association_with_transcript=-52bp_to_ENST00000368046_5end | |||
|cluster_id=chr1:160681693..160681719,- | |||
|description=CAGE_peak_3_at_CD48_5end | |||
|id=chr1:160681693..160681719,- | |||
|ontology_enrichment_celltype=CL:0002087!8.40e-73!119;CL:0002031!2.58e-68!124;CL:0000738!1.56e-65!140;CL:0002057!2.44e-56!42;CL:0000037!8.87e-55!172;CL:0000566!8.87e-55!172;CL:0002032!3.62e-53!165;CL:0000837!3.62e-53!165;CL:0000860!1.09e-51!45;CL:0000988!1.97e-50!182;CL:0000839!1.68e-36!70;CL:0002194!2.38e-36!63;CL:0000576!2.38e-36!63;CL:0000040!2.38e-36!63;CL:0000559!2.38e-36!63;CL:0002009!7.70e-35!65;CL:0000557!4.76e-34!71;CL:0000766!1.64e-32!76;CL:0000542!6.00e-32!53;CL:0000051!6.00e-32!53;CL:0000838!1.76e-30!52;CL:0000763!4.72e-22!112;CL:0000049!4.72e-22!112;CL:0000945!3.60e-21!24;CL:0000826!3.60e-21!24;CL:0000134!1.04e-14!358;CL:0002320!5.36e-14!365;CL:0000084!7.71e-12!25;CL:0000827!7.71e-12!25;CL:0000219!1.60e-11!390;CL:0000048!1.22e-08!430;CL:0000236!1.22e-08!14;CL:0000723!3.06e-08!436;CL:0002393!4.13e-08!9;CL:0002397!4.13e-08!9;CL:0000034!9.94e-08!444;CL:0000791!1.38e-07!18;CL:0000789!1.38e-07!18;CL:0002420!1.38e-07!18;CL:0002419!1.38e-07!18;CL:0000790!1.38e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.89e-62;33!CL:0002057;5.89e-62;33!CL:0000473;1.10e-40;39!CL:0000234;1.10e-40;39!CL:0000576;1.75e-26;48!CL:0000945;4.27e-25;24!CL:0002087;9.82e-20;104!CL:0000766;6.19e-16;69!CL:0000738;1.16e-10;136!CL:0000542;1.93e-10;53!CL:0000763;3.51e-07;100!CL:0000988;4.04e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.12e-51,42;CL:0002057,1.12e-51,42;CL:0002087,1.42e-51,115;CL:0002031,2.82e-46,120;CL:0000738,6.77e-45,136;CL:0000473,1.58e-44,48;CL:0000234,1.58e-44,48;CL:0000037,7.39e-35,168;CL:0002032,1.19e-34,161;CL:0000837,1.19e-34,161;CL:0002194,1.61e-34,59;CL:0000576,1.61e-34,59;CL:0000040,1.61e-34,59;CL:0000559,1.61e-34,59;CL:0002009,3.15e-33,61;CL:0000988,1.11e-32,177;CL:0000839,2.45e-30,66;CL:0000557,8.25e-30,67;CL:0000766,2.16e-27,72;CL:0000945,5.78e-25,24;CL:0000826,5.78e-25,24;CL:0000542,3.89e-18,53;CL:0000051,3.89e-18,53;CL:0000763,1.50e-16,108;CL:0000049,1.50e-16,108;CL:0000838,3.95e-16,52;CL:0000134,2.90e-12,354;CL:0002320,7.27e-12,361;CL:0000219,1.85e-10,386;CL:0000048,9.67e-09,427;CL:0000723,1.67e-08,433;CL:0000034,3.38e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.07e-38;42!CL:0000051;1.93e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.27e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.35e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.86e-34!102;UBERON:0003061!5.86e-34!102;UBERON:0002193!2.25e-32!112;UBERON:0002371!9.71e-29!80;UBERON:0002405!4.08e-27!115;UBERON:0001474!7.95e-26!86;UBERON:0004765!3.35e-21!101;UBERON:0001434!3.35e-21!101;UBERON:0002384!1.37e-13!375;UBERON:0004177!2.15e-12!7;UBERON:0002204!3.06e-09!167;UBERON:0003081!7.09e-09!216;UBERON:0002370!5.55e-08!4;UBERON:0005058!5.55e-08!4;UBERON:0009113!5.55e-08!4;UBERON:0003295!5.55e-08!4;UBERON:0005562!5.55e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.30e-09;2!UBERON:0005058;1.30e-09;2!UBERON:0009113;1.30e-09;2!UBERON:0004177;1.11e-08;5!UBERON:0005057;1.11e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,8.13e-29,93;UBERON:0002390,4.84e-27,98;UBERON:0003061,4.84e-27,98;UBERON:0002371,1.10e-25,76;UBERON:0002193,5.57e-24,108;UBERON:0001474,1.97e-23,82;UBERON:0004765,6.81e-21,90;UBERON:0001434,2.74e-18,100;UBERON:0002384,2.54e-11,371;UBERON:0004177,1.70e-10,7;UBERON:0005057,1.70e-10,7;UBERON:0002370,1.95e-10,4;UBERON:0005058,1.95e-10,4;UBERON:0009113,1.95e-10,4;UBERON:0003295,1.95e-10,4;UBERON:0005562,1.95e-10,4;UBERON:0003081,6.14e-10,203;UBERON:0002204,6.67e-09,167;UBERON:0003351,4.19e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.132949635666,3.03772180964799,2.67616656466509,0,0,0.154816123316076,0,0,0,1.00707360754392,2.98555388223585,0,0,0,0.651032612147555,0,0,0,0.436194716338694,1.51150377475524,0.485168122375632,1.16214518452842,2.46700732813095,1.54853185447552,1.43846196161075,0.768482119587302,1.6553756092201,4.48169384957604,3.22742341791913,5.41705946377367,0.564727018627814,1.63743690034707,2.02251136000576,1.53041946185451,2.24650318953266,1.91801137739712,0,1.39624560335142,0.426224750532694,2.32167390902867,3.40431134814684,2.4912889959823,1.00499466102697,0.521482918420201,1.73751075764093,2.42159801053347,3.31449872388808,5.06339819905415,0.633765858935825,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0.855038231223746,0.39783335439818,0.365328307529268,0,1.09227722252426,0.889509253863555,0.426730222566507,0,0,0,0.954053754535364,0.569212969109448,0.587237189370939,1.14681968437569,0,0,0,0,0,0.616804496998528,0.501559486172034,0,0.473447805734733,0,0.445641827540694,0,0.221533894583621,0.270803863765016,0.640456598628376,0.910415432919148,1.15106533222573,0.829050053357545,0.289803085735052,0.593146252648242,0,0,0.679856056185397,0.766440987203842,0.34362744548263,1.26509846009751,0.637130828648193,0.651083453856419,0,0.301150238155546,0.255973222308837,0,0.710331756132051,0.821127996921047,0.604820229674197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,1.00876629594175,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,2.41544127663434,0.144269212976445,0.284567373393656,0.637705090915289,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1700741843344,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35477331305255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0.197611631897944,2.67943716437971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60544317868143,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.469919589899268,0.515663103788617,5.29688126402123,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80848947540817,1.73809200028402,0,0,0,0.217716747896961,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,3.20568492303233 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| ||
|short_description=p3@CD48 | |||
}} | }} |
Latest revision as of 03:07, 18 September 2015
Short description: | p3@CD48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD48_5end |
Coexpression cluster: | NA |
Association with transcript: | -52bp_to_ENST00000368046_5end |
EntrezGene: | CD48 |
HGNC: | 1683 |
UniProt: | P09326 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immune system | 8.13e-29 | 93 |
hematopoietic system | 4.84e-27 | 98 |
blood island | 4.84e-27 | 98 |
bone marrow | 1.10e-25 | 76 |
hemolymphoid system | 5.57e-24 | 108 |
bone element | 1.97e-23 | 82 |
skeletal element | 6.81e-21 | 90 |
skeletal system | 2.74e-18 | 100 |
connective tissue | 2.54e-11 | 371 |
hemopoietic organ | 1.70e-10 | 7 |
immune organ | 1.70e-10 | 7 |
thymus | 1.95e-10 | 4 |
hemolymphoid system gland | 1.95e-10 | 4 |
thymic region | 1.95e-10 | 4 |
pharyngeal gland | 1.95e-10 | 4 |
thymus primordium | 1.95e-10 | 4 |
lateral plate mesoderm | 6.14e-10 | 203 |
musculoskeletal system | 6.67e-09 | 167 |
pharyngeal epithelium | 4.19e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.35e-11 | 10 |