FFCP PHASE1:Hg19::chr9:96338781..96338800,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5253 | |EntrezGene=5253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8920 | |HGNC=8920 | ||
|TSSclassifier=strong | |||
|UniProt=O75151 | |UniProt=O75151 | ||
|association_with_transcript=92bp_to_ENST00000359246_5end | |association_with_transcript=92bp_to_ENST00000359246_5end | ||
|cluster_id=chr9:96338781..96338800,+ | |||
|description=CAGE_peak_4_at_PHF2_5end | |description=CAGE_peak_4_at_PHF2_5end | ||
|id=chr9:96338781..96338800,+ | |id=chr9:96338781..96338800,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.95e-14!115;UBERON:0001049!8.90e-10!57;UBERON:0005068!8.90e-10!57;UBERON:0006241!8.90e-10!57;UBERON:0007135!8.90e-10!57;UBERON:0003075!4.70e-09!86;UBERON:0007284!4.70e-09!86;UBERON:0002346!7.09e-09!90;UBERON:0002616!1.03e-08!59;UBERON:0001017!1.57e-08!82;UBERON:0004121!1.67e-08!169;UBERON:0000924!1.81e-08!173;UBERON:0006601!1.81e-08!173;UBERON:0000073!5.17e-08!94;UBERON:0001016!5.17e-08!94;UBERON:0000468!5.27e-08!659;UBERON:0005743!8.63e-08!86;UBERON:0003080!3.31e-07!42;UBERON:0000955!3.68e-07!69;UBERON:0006238!3.68e-07!69;UBERON:0000467!5.81e-07!625;UBERON:0002780!6.27e-07!41;UBERON:0001890!6.27e-07!41;UBERON:0006240!6.27e-07!41;UBERON:0000480!8.84e-07!626 | |ontology_enrichment_uberon=UBERON:0007023!3.95e-14!115;UBERON:0001049!8.90e-10!57;UBERON:0005068!8.90e-10!57;UBERON:0006241!8.90e-10!57;UBERON:0007135!8.90e-10!57;UBERON:0003075!4.70e-09!86;UBERON:0007284!4.70e-09!86;UBERON:0002346!7.09e-09!90;UBERON:0002616!1.03e-08!59;UBERON:0001017!1.57e-08!82;UBERON:0004121!1.67e-08!169;UBERON:0000924!1.81e-08!173;UBERON:0006601!1.81e-08!173;UBERON:0000073!5.17e-08!94;UBERON:0001016!5.17e-08!94;UBERON:0000468!5.27e-08!659;UBERON:0005743!8.63e-08!86;UBERON:0003080!3.31e-07!42;UBERON:0000955!3.68e-07!69;UBERON:0006238!3.68e-07!69;UBERON:0000467!5.81e-07!625;UBERON:0002780!6.27e-07!41;UBERON:0001890!6.27e-07!41;UBERON:0006240!6.27e-07!41;UBERON:0000480!8.84e-07!626 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.79e-15,114;UBERON:0003075,1.68e-10,82;UBERON:0007284,1.68e-10,82;UBERON:0002346,4.16e-10,86;UBERON:0001049,1.10e-09,56;UBERON:0005068,1.10e-09,56;UBERON:0006241,1.10e-09,56;UBERON:0007135,1.10e-09,56;UBERON:0000073,1.04e-08,53;UBERON:0002616,1.04e-08,53;UBERON:0004121,1.31e-08,171;UBERON:0000924,1.31e-08,171;UBERON:0006601,1.31e-08,171;UBERON:0001016,1.49e-08,89;UBERON:0001017,1.73e-08,81;UBERON:0010371,3.79e-08,104;UBERON:0002780,5.52e-07,41;UBERON:0001890,5.52e-07,41;UBERON:0003080,5.52e-07,41;UBERON:0006240,5.52e-07,41;UBERON:0010314,6.36e-07,132;UBERON:0003056,8.54e-07,61 | |||
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| ||
|short_description=p4@PHF2 | |short_description=p4@PHF2 | ||
}} | }} |
Latest revision as of 09:19, 18 September 2015
Short description: | p4@PHF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PHF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 92bp_to_ENST00000359246_5end |
EntrezGene: | PHF2 |
HGNC: | 8920 |
UniProt: | O75151 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.79e-15 | 114 |
neural plate | 1.68e-10 | 82 |
presumptive neural plate | 1.68e-10 | 82 |
neurectoderm | 4.16e-10 | 86 |
neural tube | 1.10e-09 | 56 |
neural rod | 1.10e-09 | 56 |
future spinal cord | 1.10e-09 | 56 |
neural keel | 1.10e-09 | 56 |
regional part of nervous system | 1.04e-08 | 53 |
regional part of brain | 1.04e-08 | 53 |
ectoderm-derived structure | 1.31e-08 | 171 |
ectoderm | 1.31e-08 | 171 |
presumptive ectoderm | 1.31e-08 | 171 |
nervous system | 1.49e-08 | 89 |
central nervous system | 1.73e-08 | 81 |
ecto-epithelium | 3.79e-08 | 104 |
regional part of forebrain | 5.52e-07 | 41 |
forebrain | 5.52e-07 | 41 |
anterior neural tube | 5.52e-07 | 41 |
future forebrain | 5.52e-07 | 41 |
structure with developmental contribution from neural crest | 6.36e-07 | 132 |
pre-chordal neural plate | 8.54e-07 | 61 |