FFCP PHASE1:Hg19::chr5:64777685..64777712,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:64777685..64777712,- to FFCP PHASE1:Hg19::chr5:64777685..64777712,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11174 | |EntrezGene=11174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=222 | |HGNC=222 | ||
|TSSclassifier=strong | |||
|UniProt=C9JX62,Q5IR90,Q9UKP5 | |UniProt=C9JX62,Q5IR90,Q9UKP5 | ||
|association_with_transcript=0bp_to_ENST00000261306,ENST00000536360,NM_197941,uc003jtp.2,uc003jtq.2_5end | |||
|cluster_id=chr5:64777685..64777712,- | |||
|description=CAGE_peak_2_at_ADAMTS6_5end | |||
|id=chr5:64777685..64777712,- | |||
|ontology_enrichment_celltype=CL:0000055!3.68e-24!180;CL:0000222!1.83e-17!119;CL:0000057!6.79e-16!75;CL:0000680!1.03e-11!57;CL:0000056!1.03e-11!57;CL:0000355!1.03e-11!57;CL:0000220!1.48e-11!246;CL:0002321!3.74e-11!248;CL:0000187!4.45e-11!54;CL:0000183!4.50e-11!59;CL:0000192!7.67e-11!42;CL:0000514!7.67e-11!42;CL:0000359!9.88e-11!32;CL:0002620!1.31e-10!23;CL:0002371!3.02e-10!591;CL:0002139!7.53e-09!24;CL:0000144!8.03e-09!625;CL:0000393!8.30e-09!60;CL:0000211!8.30e-09!60;CL:0000115!3.55e-07!35;CL:0000213!3.65e-07!57;CL:0000215!3.65e-07!57;CL:0000548!5.58e-07!679;CL:0000004!5.58e-07!679;CL:0000255!5.58e-07!679;CL:0000071!7.70e-07!18;CL:0002546!7.70e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.79e-12;23!CL:0000359;2.70e-12;32!CL:0002139;6.92e-10;24!CL:0000349;4.46e-09;19!CL:0000134;4.87e-09;55!CL:0000192;1.35e-08;43!CL:0000057;4.31e-08;73!CL:0000048;6.25e-08;58!CL:0000723;6.80e-08;61!CL:0000071;2.08e-07;18!CL:0000115;2.31e-07;36!CL:0000187;5.24e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.16e-20,121;CL:0000057,3.62e-18,76;CL:0000359,2.75e-13,32;CL:0000680,2.90e-13,58;CL:0000056,2.90e-13,58;CL:0000355,2.90e-13,58;CL:0002620,7.93e-13,23;CL:0002321,1.39e-12,250;CL:0000187,1.78e-12,55;CL:0000192,1.60e-11,43;CL:0000514,1.60e-11,43;CL:0002139,5.77e-10,24;CL:0000393,8.63e-10,61;CL:0000211,8.63e-10,61;CL:0000349,4.70e-09,19;CL:0000213,9.34e-09,58;CL:0000215,9.34e-09,58;CL:0000115,1.21e-08,36;CL:0000071,1.76e-07,18;CL:0002546,1.76e-07,18;CL:0002078,3.24e-07,45;CL:0000048,9.11e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000514;1.35e-08;43!CL:0002546;2.08e-07;18!CL:0000355;2.43e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!3.93e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.60e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.37e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!3.83e-20!79;UBERON:0007798!3.83e-20!79;UBERON:0004872!1.06e-18!84;UBERON:0000055!4.56e-17!69;UBERON:0004535!4.17e-16!110;UBERON:0001981!1.00e-15!60;UBERON:0007500!1.00e-15!60;UBERON:0004537!1.00e-15!60;UBERON:0006965!1.00e-15!60;UBERON:0001009!7.65e-15!113;UBERON:0000914!2.47e-14!83;UBERON:0002329!2.47e-14!83;UBERON:0003077!2.47e-14!83;UBERON:0003059!2.47e-14!83;UBERON:0007282!2.47e-14!83;UBERON:0009618!2.47e-14!83;UBERON:0007285!2.47e-14!83;UBERON:0000486!8.52e-14!82;UBERON:0001637!3.23e-13!42;UBERON:0003509!3.23e-13!42;UBERON:0004572!3.23e-13!42;UBERON:0000119!4.34e-12!312;UBERON:0003914!5.70e-12!118;UBERON:0004290!1.04e-11!70;UBERON:0000483!1.46e-11!309;UBERON:0004573!4.74e-11!33;UBERON:0004571!4.74e-11!33;UBERON:0005256!1.98e-10!143;UBERON:0000490!1.11e-09!138;UBERON:0001134!1.23e-09!61;UBERON:0002036!1.23e-09!61;UBERON:0003082!1.23e-09!61;UBERON:0002385!1.62e-09!63;UBERON:0001015!1.62e-09!63;UBERON:0000383!1.62e-09!63;UBERON:0002097!2.56e-08!40;UBERON:0000478!2.67e-08!24;UBERON:0000947!3.97e-08!21;UBERON:0010191!3.97e-08!21;UBERON:0002199!7.78e-08!45;UBERON:0002416!7.78e-08!45;UBERON:0000477!8.43e-08!286;UBERON:0000468!1.24e-07!659;UBERON:0005631!1.43e-07!14;UBERON:0000158!1.43e-07!14;UBERON:0000467!3.16e-07!625;UBERON:0000475!3.73e-07!365;UBERON:0000480!4.76e-07!626;UBERON:0003102!5.80e-07!95;UBERON:0001986!7.70e-07!18;UBERON:0004638!7.70e-07!18;UBERON:0004852!7.70e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.99e-12;33!UBERON:0004571;3.99e-12;33!UBERON:0001637;1.01e-11;42!UBERON:0003509;1.01e-11;42!UBERON:0004572;1.01e-11;42!UBERON:0007500;8.79e-11;56!UBERON:0001981;8.79e-11;56!UBERON:0004537;8.79e-11;56!UBERON:0000055;7.64e-10;65!UBERON:0002049;1.17e-09;75!UBERON:0007798;1.17e-09;75!UBERON:0000947;5.42e-09;21!UBERON:0010191;5.42e-09;21!UBERON:0000478;8.17e-09;24!UBERON:0004638;2.08e-07;18!UBERON:0001986;2.08e-07;18!UBERON:0004852;2.08e-07;18!UBERON:0003914;2.30e-07;74!UBERON:0000487;5.70e-07;22!UBERON:0005631;7.41e-07;10!UBERON:0000158;7.41e-07;10 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,0,0.872338524100369,0,2.52687949370732,0,5.16041266653169,1.39560233594486,17.693751142544,9.49561121622433,0.247532705920093,0.331397375727916,2.6893005858071,5.42425075221579,7.30310090387373,3.90346239032406,1.35433163884467,0.204000691244253,0,1.43117993565528,0.547497700291537,3.38965126905968,0.764134057479513,0.985207073399349,0.944529375764151,0,0,0.464448369948228,0.919421224478927,0.6024118375565,0.739508020333575,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0.786839080455332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.255725123687061,1.44575660953827,0.50133791063589,1.44846518960824,14.3151470469198,19.4653948121054,6.14476311566441,5.09977614163897,10.2766699260957,0.589405839739707,0.364295288292542,0.370784442784429,0,0,0,0.238490624305342,0.571994910780128,0,5.76410981363445,3.4409383804245,2.77712401286075,2.82653970962005,6.71199097935849,1.37559020970034,4.38889429727302,3.87625138753993,2.13459757612026,5.02080919147005,6.0424397566372,4.56163263431108,2.4406205754817,5.51494620518803,4.0507097394088,6.51888016473782,4.4905874525234,6.41885438754937,1.53316637465883,0.949265659568129,2.19842092716489,0,0,0,6.46063537203914,3.03913227994991,19.7289679411696,13.4813211751942,0.709336764396714,1.68203280042692,4.2699598291882,2.22000793575444,1.8672662123986,6.06198024313596,5.06731899651722,1.21085942115945,0.576175924479999,4.45210720484214,2.49728061464256,1.1409436430889,2.24173020827702,16.2059608128396,7.12240955219779,11.0956137294776,3.0623125688234,5.03620700978249,0.826606249406124,1.18800285728205,2.22540236350701,0.910161361938026,1.43723628363248,5.38675564653012,6.13080747372624,5.26421819419948,6.14568669233173,4.90380473278431,1.65261864797256,1.58805056424029,13.2748330409758,4.48470516518992,7.2056846394251,14.1042815159669,4.74041634496819,11.3361837620077,2.97786970130544,13.5021065793013,2.92311015483596,15.9033277773792,4.60249493211497,1.61646056818812,5.68015348026583,3.82857973265033,4.91725717700414,2.12586938479627,4.63668405004419,2.00763216772303,0.121973706129595,0,0.232387885739037,0.414644220061482,0,0,1.56449532329816,0.643240938192885,2.76269842704961,0.464367928031979,0,0.236613600079688,0.168584690078102,0.482022059766964,0,0,0.237270619111097,0.269662616320329,0,0.769494313892781,1.4763109092493,1.40241773803446,0,0,0,0,0.590789906681404,0,0,1.54411029268673,2.08525542276389,0,3.82010095164197,0.833296006426766,2.6064664424826,1.03993478527958,0,2.89826012437692,3.17003474436719,5.91902435820403,3.24089858803628,4.56609965363036,0,0,0.246217006087397,0,0.445893486866185,3.74935335947108,3.35964256397719,4.11147782002921,4.56748465784526,3.19697332365358,1.53353071666084,9.85326475791887,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0,0,3.1396703616701,2.61576041299968,2.0534720029866,5.42941206182667,0,2.535908257668,4.78688609852767,2.08014873822732,3.08648849114571,2.83698264046557,4.26275486425759,0.285955987316295,3.25572963234866,4.11620168390384,1.62868092146868,0.355391948742546,0.791951872933429,0.602878754119172,0,2.69927076191554,0,0,0,2.63587341040741,2.29723871668228,0,2.02693829334611,1.02738161275192,8.95304816199478,0,0.197030760201927,0,0.128343036279748,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0.500170521059677,1.08506009479894,3.32753378449291,4.46072471992904,2.05013139544115,2.57711112983969,0.902838299183157,0,0,5.31380478828349,4.60922921354258,3.12781012085098,1.17480694477644,0.686286847621712,0.206768026122887,0,0,3.03127571446259,4.99306318531491,5.74541557326393,1.48864684691266,3.52962538562544,0.280660094433074,0.896974044789907,1.02341449813341,2.73451665944133,1.48418066444991,4.1636617326717,2.13074070375753,2.87445046048332,4.15403543346897,1.85936605535935,0,1.00253235151642,0.920809889358963,0.68888668898764,3.64182336013434,0.786746489756545,0.902399225814824,2.0794141018192,0,1.46139224653261,4.11651352682215,2.27466768141793,2.04112446331819,2.15915916102139,3.08454505380579,1.08378575017541,0.501689773854853,0.509752546090077,0,0.447749509444357,0,0.261435451024901,0,0.328014645699706,0.976135183992909,6.90374778039739,1.83138929636687,1.81520899825294,1.14853107599234,1.30012049207304,3.21367859688319,4.35018232314549,3.85121542786611,1.99554777143968,12.5431280960923,4.18938954986267,2.32026710262766,8.35220948677789,2.58192903375538,0.165284915360978,1.15314040419064,14.420236511888,0.2023155617111,2.78907329578371,18.5739284630078,2.0911118104818,3.69640296211307,2.12922412126809,3.47973196830029,3.89180860118232,6.5837447901316,1.86079184679834,7.90948561796815,5.14701523594327,0.767693373934002,0.855877976067841,3.5002357271853,10.20433232259,1.61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| ||
|short_description=p2@ADAMTS6 | |||
}} | }} |
Latest revision as of 10:14, 18 September 2015
Short description: | p2@ADAMTS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ADAMTS6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000261306, ENST00000536360, NM_197941, uc003jtp.2, uc003jtq.2_5end |
EntrezGene: | ADAMTS6 |
HGNC: | 222 |
UniProt: | C9JX62Q5IR90Q9UKP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.16e-20 | 121 |
fibroblast | 3.62e-18 | 76 |
vascular associated smooth muscle cell | 2.75e-13 | 32 |
muscle precursor cell | 2.90e-13 | 58 |
myoblast | 2.90e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.90e-13 | 58 |
skin fibroblast | 7.93e-13 | 23 |
embryonic cell | 1.39e-12 | 250 |
muscle cell | 1.78e-12 | 55 |
smooth muscle cell | 1.60e-11 | 43 |
smooth muscle myoblast | 1.60e-11 | 43 |
endothelial cell of vascular tree | 5.77e-10 | 24 |
electrically responsive cell | 8.63e-10 | 61 |
electrically active cell | 8.63e-10 | 61 |
extraembryonic cell | 4.70e-09 | 19 |
lining cell | 9.34e-09 | 58 |
barrier cell | 9.34e-09 | 58 |
endothelial cell | 1.21e-08 | 36 |
blood vessel endothelial cell | 1.76e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.76e-07 | 18 |
meso-epithelial cell | 3.24e-07 | 45 |
multi fate stem cell | 9.11e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.37e-09 | 14 |