FFCP PHASE1:Hg19::chr6:36355360..36355392,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:36355360..36355392,-
|short_description=p4@ETV7
|description=CAGE_peak_4_at_ETV7_5end
|association_with_transcript=74bp_to_uc003olz.1,uc003oma.1,uc003omb.2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51513 | |EntrezGene=51513 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18160 | |HGNC=18160 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y603 | |UniProt=Q9Y603 | ||
|association_with_transcript=74bp_to_uc003olz.1,uc003oma.1,uc003omb.2,uc003omc.2,uc010jwg.2,uc010jwh.2,uc010jwi.2,uc010jwj.2,uc011dtl.1_5end | |||
|cluster_id=chr6:36355360..36355392,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_4_at_ETV7_5end | |||
|id=chr6:36355360..36355392,- | |||
|ontology_enrichment_celltype=CL:0002057!1.74e-07!42;CL:0000860!8.33e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.30e-35;33!CL:0002057;8.30e-35;33!CL:0000473;5.14e-25;39!CL:0000234;5.14e-25;39!CL:0000576;1.05e-18;48!CL:0000766;3.60e-10;69!CL:0000763;1.94e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.53e-30,42;CL:0002057,3.53e-30,42;CL:0000473,2.76e-26,48;CL:0000234,2.76e-26,48;CL:0000839,1.83e-22,66;CL:0000557,4.08e-22,67;CL:0002194,7.91e-21,59;CL:0000576,7.91e-21,59;CL:0000040,7.91e-21,59;CL:0000559,7.91e-21,59;CL:0000766,1.60e-20,72;CL:0002009,4.01e-20,61;CL:0000988,3.07e-15,177;CL:0002031,2.61e-14,120;CL:0000763,2.44e-13,108;CL:0000049,2.44e-13,108;CL:0002087,1.62e-12,115;CL:0000738,1.78e-12,136;CL:0002032,2.50e-10,161;CL:0000837,2.50e-10,161;CL:0000037,7.70e-10,168 | |||
|ontology_enrichment_development_v019=CL:0002057;4.48e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;7.13e-15;1!DOID:0060061;7.13e-15;1!DOID:8691;7.13e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,7.13e-15,1;DOID:0060061,7.13e-15,1;DOID:8691,7.13e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.00e-14!115;UBERON:0000007!6.86e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.01e-13;10!UBERON:0000178;9.01e-09;15!UBERON:0000179;9.01e-09;15!UBERON:0000463;9.01e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.08e-24,98;UBERON:0003061,1.08e-24,98;UBERON:0002193,2.68e-22,108;UBERON:0002371,2.15e-19,76;UBERON:0001474,6.62e-18,82;UBERON:0004765,3.18e-16,90;UBERON:0002405,1.15e-15,93;UBERON:0001434,1.70e-14,100;UBERON:0002331,7.01e-13,10;UBERON:0000358,7.01e-13,10;UBERON:0000307,7.01e-13,10;UBERON:0000091,7.01e-13,10;UBERON:0000087,7.01e-13,10;UBERON:0007010,7.01e-13,10;UBERON:0007806,7.01e-13,10;UBERON:0008780,7.01e-13,10;UBERON:0005728,7.01e-13,10;UBERON:0003081,3.33e-11,203;UBERON:0000178,9.01e-09,15;UBERON:0000179,9.01e-09,15;UBERON:0000463,9.01e-09,15;UBERON:0002204,3.44e-08,167 | |||
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| ||
|short_description=p4@ETV7 | |||
}} | }} |
Latest revision as of 12:15, 18 September 2015
Short description: | p4@ETV7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ETV7_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 74bp_to_uc003olz.1, uc003oma.1, uc003omb.2, uc003omc.2, uc010jwg.2, uc010jwh.2, uc010jwi.2, uc010jwj.2, uc011dtl.1_5end |
EntrezGene: | ETV7 |
HGNC: | 18160 |
UniProt: | Q9Y603 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.53e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.53e-30 | 42 |
defensive cell | 2.76e-26 | 48 |
phagocyte | 2.76e-26 | 48 |
myeloid lineage restricted progenitor cell | 1.83e-22 | 66 |
granulocyte monocyte progenitor cell | 4.08e-22 | 67 |
monopoietic cell | 7.91e-21 | 59 |
monocyte | 7.91e-21 | 59 |
monoblast | 7.91e-21 | 59 |
promonocyte | 7.91e-21 | 59 |
myeloid leukocyte | 1.60e-20 | 72 |
macrophage dendritic cell progenitor | 4.01e-20 | 61 |
hematopoietic cell | 3.07e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 2.61e-14 | 120 |
myeloid cell | 2.44e-13 | 108 |
common myeloid progenitor | 2.44e-13 | 108 |
nongranular leukocyte | 1.62e-12 | 115 |
leukocyte | 1.78e-12 | 136 |
hematopoietic oligopotent progenitor cell | 2.50e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.50e-10 | 161 |
hematopoietic stem cell | 7.70e-10 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.08e-24 | 98 |
blood island | 1.08e-24 | 98 |
hemolymphoid system | 2.68e-22 | 108 |
bone marrow | 2.15e-19 | 76 |
bone element | 6.62e-18 | 82 |
skeletal element | 3.18e-16 | 90 |
immune system | 1.15e-15 | 93 |
skeletal system | 1.70e-14 | 100 |
umbilical cord | 7.01e-13 | 10 |
blastocyst | 7.01e-13 | 10 |
blastula | 7.01e-13 | 10 |
bilaminar disc | 7.01e-13 | 10 |
inner cell mass | 7.01e-13 | 10 |
cleaving embryo | 7.01e-13 | 10 |
connecting stalk | 7.01e-13 | 10 |
inner cell mass derived epiblast | 7.01e-13 | 10 |
extraembryonic mesoderm | 7.01e-13 | 10 |
lateral plate mesoderm | 3.33e-11 | 203 |
blood | 9.01e-09 | 15 |
haemolymphatic fluid | 9.01e-09 | 15 |
organism substance | 9.01e-09 | 15 |
musculoskeletal system | 3.44e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 7.13e-15 | 1 |
cutaneous T cell lymphoma | 7.13e-15 | 1 |
mycosis fungoides | 7.13e-15 | 1 |