FFCP PHASE1:Hg19::chr5:68711211..68711238,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153562 | |EntrezGene=153562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26401 | |HGNC=26401 | ||
|TSSclassifier=strong | |||
|UniProt=D6RA09 | |UniProt=D6RA09 | ||
|association_with_transcript=2bp_to_ENST00000512803_5end | |association_with_transcript=2bp_to_ENST00000512803_5end | ||
|cluster_id=chr5:68711211..68711238,+ | |||
|coexpression_cluster_id=C1727 | |||
|description=CAGE_peak_4_at_MARVELD2_5end | |description=CAGE_peak_4_at_MARVELD2_5end | ||
|id=chr5:68711211..68711238,+ | |id=chr5:68711211..68711238,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.69e-30!254;CL:0002076!2.89e-22!43;CL:0000223!5.92e-22!59;CL:0002251!1.95e-11!21;CL:0002368!2.20e-10!13 | |ontology_enrichment_celltype=CL:0000066!3.69e-30!254;CL:0002076!2.89e-22!43;CL:0000223!5.92e-22!59;CL:0002251!1.95e-11!21;CL:0002368!2.20e-10!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.81e-14;42!CL:0002368;2.06e-12;13!CL:0000244;9.06e-09;4!CL:0000731;9.06e-09;4!CL:0002327;1.01e-07;4!CL:0002159;2.83e-07;14!CL:0002251;7.10e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.56e-18,253;CL:0002076,4.18e-18,42;CL:0000223,8.27e-18,58;CL:0002368,3.57e-12,13;CL:0000244,8.39e-09,4;CL:0000731,8.39e-09,4;CL:0002327,7.87e-08,4;CL:0002159,1.64e-07,14;CL:0002251,5.49e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;4.77e-10;58!UBERON:0001041;4.50e-07;30 | |||
|ontology_enrichment_disease=DOID:305!4.40e-20!106;DOID:0050687!1.19e-13!143;DOID:1749!3.09e-10!14;DOID:299!1.03e-07!25 | |ontology_enrichment_disease=DOID:305!4.40e-20!106;DOID:0050687!1.19e-13!143;DOID:1749!3.09e-10!14;DOID:299!1.03e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.80e-08;4!DOID:1612;2.80e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.43e-08,106;DOID:5093,4.73e-08,4;DOID:1612,4.73e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.11e-28!169;UBERON:0000925!5.11e-28!169;UBERON:0006595!5.11e-28!169;UBERON:0001007!1.41e-22!155;UBERON:0001555!1.41e-22!155;UBERON:0007026!1.41e-22!155;UBERON:0004921!2.55e-20!129;UBERON:0004185!2.55e-20!129;UBERON:0000466!2.01e-18!126;UBERON:0000464!2.41e-17!104;UBERON:0000077!1.71e-16!130;UBERON:0005911!5.09e-15!82;UBERON:0001004!1.45e-14!72;UBERON:0001041!3.03e-13!98;UBERON:0005177!8.52e-13!107;UBERON:0005153!2.16e-11!37;UBERON:0009569!7.23e-11!113;UBERON:0000161!2.14e-10!35;UBERON:0000062!2.66e-10!511;UBERON:0001008!2.97e-10!45;UBERON:0005178!7.97e-10!34;UBERON:0002224!7.97e-10!34;UBERON:0006554!8.38e-10!44;UBERON:0000065!1.59e-09!53;UBERON:0002530!2.02e-09!59;UBERON:0005181!2.42e-09!35;UBERON:0005157!2.93e-09!51;UBERON:0002553!5.46e-09!70;UBERON:0005156!9.46e-09!59;UBERON:0000990!9.46e-09!59;UBERON:0000166!1.76e-08!21;UBERON:0003104!5.90e-08!238;UBERON:0009142!5.90e-08!238;UBERON:0002048!7.32e-08!22;UBERON:0000117!7.32e-08!22;UBERON:0000171!7.32e-08!22;UBERON:0000170!7.32e-08!22;UBERON:0005597!7.32e-08!22;UBERON:0000118!7.32e-08!22;UBERON:0002365!8.90e-08!31;UBERON:0002330!8.90e-08!31;UBERON:0003135!9.51e-08!11;UBERON:0003101!1.10e-07!22;UBERON:0000079!1.10e-07!22;UBERON:0003133!1.12e-07!48;UBERON:0000468!1.25e-07!659;UBERON:0000922!1.76e-07!612;UBERON:0000915!3.43e-07!52;UBERON:0000481!3.76e-07!347;UBERON:0001048!4.05e-07!168;UBERON:0003064!5.06e-07!37 | |ontology_enrichment_uberon=UBERON:0004119!5.11e-28!169;UBERON:0000925!5.11e-28!169;UBERON:0006595!5.11e-28!169;UBERON:0001007!1.41e-22!155;UBERON:0001555!1.41e-22!155;UBERON:0007026!1.41e-22!155;UBERON:0004921!2.55e-20!129;UBERON:0004185!2.55e-20!129;UBERON:0000466!2.01e-18!126;UBERON:0000464!2.41e-17!104;UBERON:0000077!1.71e-16!130;UBERON:0005911!5.09e-15!82;UBERON:0001004!1.45e-14!72;UBERON:0001041!3.03e-13!98;UBERON:0005177!8.52e-13!107;UBERON:0005153!2.16e-11!37;UBERON:0009569!7.23e-11!113;UBERON:0000161!2.14e-10!35;UBERON:0000062!2.66e-10!511;UBERON:0001008!2.97e-10!45;UBERON:0005178!7.97e-10!34;UBERON:0002224!7.97e-10!34;UBERON:0006554!8.38e-10!44;UBERON:0000065!1.59e-09!53;UBERON:0002530!2.02e-09!59;UBERON:0005181!2.42e-09!35;UBERON:0005157!2.93e-09!51;UBERON:0002553!5.46e-09!70;UBERON:0005156!9.46e-09!59;UBERON:0000990!9.46e-09!59;UBERON:0000166!1.76e-08!21;UBERON:0003104!5.90e-08!238;UBERON:0009142!5.90e-08!238;UBERON:0002048!7.32e-08!22;UBERON:0000117!7.32e-08!22;UBERON:0000171!7.32e-08!22;UBERON:0000170!7.32e-08!22;UBERON:0005597!7.32e-08!22;UBERON:0000118!7.32e-08!22;UBERON:0002365!8.90e-08!31;UBERON:0002330!8.90e-08!31;UBERON:0003135!9.51e-08!11;UBERON:0003101!1.10e-07!22;UBERON:0000079!1.10e-07!22;UBERON:0003133!1.12e-07!48;UBERON:0000468!1.25e-07!659;UBERON:0000922!1.76e-07!612;UBERON:0000915!3.43e-07!52;UBERON:0000481!3.76e-07!347;UBERON:0001048!4.05e-07!168;UBERON:0003064!5.06e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0005911;3.04e-10;36!UBERON:0004807;3.69e-09;22!UBERON:0002048;5.46e-09;22!UBERON:0000117;5.46e-09;22!UBERON:0000171;5.46e-09;22!UBERON:0000170;5.46e-09;22!UBERON:0002365;1.80e-08;31!UBERON:0002330;1.80e-08;31!UBERON:0005178;2.04e-08;34!UBERON:0002224;2.04e-08;34!UBERON:0000065;3.07e-08;44!UBERON:0001911;1.01e-07;4!UBERON:0005631;1.48e-07;10!UBERON:0000158;1.48e-07;10!UBERON:0004921;1.73e-07;33!UBERON:0005181;2.36e-07;35!UBERON:0000486;5.67e-07;12!UBERON:0000365;5.76e-07;5!UBERON:0000160;6.33e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.18e-20,160;UBERON:0000925,2.18e-20,160;UBERON:0006595,2.18e-20,160;UBERON:0001007,2.27e-14,145;UBERON:0001555,2.27e-14,145;UBERON:0007026,2.27e-14,145;UBERON:0005911,2.15e-13,82;UBERON:0004921,3.47e-13,118;UBERON:0005153,1.77e-12,37;UBERON:0001004,1.85e-12,74;UBERON:0005157,2.48e-11,47;UBERON:0005178,1.19e-09,34;UBERON:0002224,1.19e-09,34;UBERON:0005181,2.94e-09,35;UBERON:0000065,3.23e-09,54;UBERON:0002048,3.78e-09,22;UBERON:0000117,3.78e-09,22;UBERON:0000171,3.78e-09,22;UBERON:0000170,3.78e-09,22;UBERON:0005597,3.78e-09,22;UBERON:0000118,3.78e-09,22;UBERON:0002530,6.96e-09,59;UBERON:0000915,9.27e-09,52;UBERON:0005177,1.69e-08,101;UBERON:0002365,1.80e-08,31;UBERON:0002330,1.80e-08,31;UBERON:0008947,3.28e-08,38;UBERON:0003258,3.28e-08,38;UBERON:0001911,7.87e-08,4;UBERON:0005333,7.87e-08,4;UBERON:0008425,7.87e-08,4;UBERON:0005311,7.87e-08,4;UBERON:0001041,9.77e-08,87;UBERON:0009569,1.21e-07,112;UBERON:0000160,4.39e-07,17;UBERON:0001048,4.59e-07,160;UBERON:0000365,5.42e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,1.09220686065086,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,1.8072355126695,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,2.91436230634034,2.96627554227544,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,1.36373060295417,2.00763216772303,0.487894824518382,0.265059536642971,0.69716365721711,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0,1.47586126251736,0,1.09750285408626,0,0.603173834469785,2.22212268380471,0,0,0,0,0.117408694235822,0,0,0,2.37061319387782,3.43394464837949,0,0,0,2.81201501960331,2.85569617938061,1.84307626415102,2.32852159027406,1.45316969256981,1.53353071666084,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,3.00759705454927,1.28913384510255,0,0,0,0.902399225814824,0.308061348417659,0.784349769176855,1.46139224653261,0.73886140225013,0,0,0,1.54227252690289,0,0,1.27438136522519,0.831076008928724,0.447749509444357,0,0,0,0,0.325378394664303,2.16386124460217,0,0,2.87132768998086,2.60024098414608,0,0,0,0,0,0,0,0,0,3.14041339185858,1.34533047155574,3.06270509987002,2.32662895967765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50177493086331,2.01090682660736,2.17781969722645,2.44773882019626,3.01353760869861,3.36942951335251,3.10401107475673,2.98640420269047,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,1.43246690842614,2.37571744666111,2.15012491469462,0.994147647766298,0,0,0,0.211125408127993,0.398495976502139,0.276283915531148,2.51932747854276,0,0,0,0.808815160325942,1.07412704805365,0,0.394573622547734,0,0,0,0.0927680981618513,0,1.04171104434093,4.89775999978696,0,1.2517279311405,1.01701460117107,2.6002644994473,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0.975966209950223,0.153900517007594,0,0.69169171316418,1.70539524378567,1.3037684630641,1.27600463892768,0.641183153813036,1.06606955203727,0,0,0,0,0,0,0,0,0,0.326465616318295,1.83758992864123,0,3.98104772431402,3.00755719311353,3.66618086960175,0,0,0,0.067401132980677,0,0,0,2.34797542718508,0,3.15667522279512,1.20990716048664,0,0,0.60129367765797,0.103688191397247,0,0,0,0,0.853828638089378,0,1.90915712168644,0.685946781900644,0.435296032902013,2.27144668714639,0,0.0967563312890851,0.438535902517113,0.0821154570532092,0.969890164884194,0,0.451961481561065,0,0,0,0.977756913674015,0.0801588202515337,2.98834192635094,0.39961921916426,3.60226042885265,0,0.171594997861965,0.864328787928898,0,1.41416420770077,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,1.79711100449092,0,0,0,0,2.32991899054908,0.393915911536118,0.741742725430498,0.202210631562555,0,0,0,0,0.643012593860077,0.550157746388935,0.415440338029185,0.2249738915515,0,0,1.34173875039706,1.89133697518076,2.6751839948849,0,0,3.64638874906946,0,0,0,0,0,0,0,0,0,0,1.31897010310274,0,0,0,0,1.40963004463334,1.70859860108311,1.72924735609633,1.24271716604159,0,0,0,0.638341257770182,0,0,0,0,1.09937867375164,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,1.26787274015176,0,0,0,0,0,1.81843360035278,0.622077260032973,0,0,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0,0,0,0,0,0,0,0,0.88332946650923,0.589848616738702,0.917142992608395,1.38630799380406,0,0,0,0.225630985047772,0,5.47059807863165,1.30953347240711,0,0.739280431085226,0,0,0,0,0,3.83780436800028,0.992422356778588,0,2.8107734080711,0,0,1.21393120847326,1.36597314810779,1.68534503309014,0,0,0,0,0.118193840883968,0.222462803784138,1.02041020705668,0,1.12108865325516,0,0,0,0.571812353413251,0,0,0,0,0.414432328326074,1.3657478167516,0.691259661814092,6.88363774112444,0,0,1.69354820076372,1.8328549483524,0,0,1.34226518157351,0.490751168076215,1.34109717480496,0,0,0,0,1.40363678077263,1.19370465096821,0,0.90356865631168,0,4.83081099413355,3.16414048242573,1.96703604453562,3.76253837089218,0,3.06379511232114,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0.71421575442263,2.47026410200984,1.5245859670942,0.730336388246517,2.2936464170227,0,0,0,0,4.2322147241232,0,0,0,0,0.109265571963696,0,0.203977659483963,1.06886962106224,1.56221329209236,0.50141507858475,0.985123076837112,1.87574891109325,0,0,0.852935927603924,1.42838658878244,0.193766729508018,0.248298857183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| ||
|short_description=p4@MARVELD2 | |short_description=p4@MARVELD2 | ||
}} | }} |
Latest revision as of 13:11, 18 September 2015
Short description: | p4@MARVELD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MARVELD2_5end |
Coexpression cluster: | C1727_colon_small_stomach_papillotubular_breast_duodenum_prostate |
Association with transcript: | 2bp_to_ENST00000512803_5end |
EntrezGene: | MARVELD2 |
HGNC: | 26401 |
UniProt: | D6RA09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.56e-18 | 253 |
endo-epithelial cell | 4.18e-18 | 42 |
endodermal cell | 8.27e-18 | 58 |
respiratory epithelial cell | 3.57e-12 | 13 |
transitional epithelial cell | 8.39e-09 | 4 |
urothelial cell | 8.39e-09 | 4 |
mammary gland epithelial cell | 7.87e-08 | 4 |
general ecto-epithelial cell | 1.64e-07 | 14 |
epithelial cell of alimentary canal | 5.49e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.18e-20 | 160 |
endoderm | 2.18e-20 | 160 |
presumptive endoderm | 2.18e-20 | 160 |
digestive system | 2.27e-14 | 145 |
digestive tract | 2.27e-14 | 145 |
primitive gut | 2.27e-14 | 145 |
endo-epithelium | 2.15e-13 | 82 |
subdivision of digestive tract | 3.47e-13 | 118 |
epithelial bud | 1.77e-12 | 37 |
respiratory system | 1.85e-12 | 74 |
epithelial fold | 2.48e-11 | 47 |
thoracic cavity element | 1.19e-09 | 34 |
thoracic cavity | 1.19e-09 | 34 |
thoracic segment organ | 2.94e-09 | 35 |
respiratory tract | 3.23e-09 | 54 |
lung | 3.78e-09 | 22 |
respiratory tube | 3.78e-09 | 22 |
respiration organ | 3.78e-09 | 22 |
pair of lungs | 3.78e-09 | 22 |
lung primordium | 3.78e-09 | 22 |
lung bud | 3.78e-09 | 22 |
gland | 6.96e-09 | 59 |
thoracic segment of trunk | 9.27e-09 | 52 |
trunk region element | 1.69e-08 | 101 |
exocrine gland | 1.80e-08 | 31 |
exocrine system | 1.80e-08 | 31 |
respiratory primordium | 3.28e-08 | 38 |
endoderm of foregut | 3.28e-08 | 38 |
mammary gland | 7.87e-08 | 4 |
mammary bud | 7.87e-08 | 4 |
mammary ridge | 7.87e-08 | 4 |
mammary placode | 7.87e-08 | 4 |
foregut | 9.77e-08 | 87 |
subdivision of trunk | 1.21e-07 | 112 |
intestine | 4.39e-07 | 17 |
primordium | 4.59e-07 | 160 |
urothelium | 5.42e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.43e-08 | 106 |
thoracic cancer | 4.73e-08 | 4 |
breast cancer | 4.73e-08 | 4 |