FFCP PHASE1:Hg19::chr4:74702707..74702718,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6372 | |EntrezGene=6372 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10643 | |HGNC=10643 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-185bp_to_ENST00000503446_5end | |association_with_transcript=-185bp_to_ENST00000503446_5end | ||
|cluster_id=chr4:74702707..74702718,+ | |||
|coexpression_cluster_id=C1524 | |coexpression_cluster_id=C1524 | ||
|description=CAGE_peak_7_at_CXCL6_5end | |description=CAGE_peak_7_at_CXCL6_5end | ||
|id=chr4:74702707..74702718,+ | |id=chr4:74702707..74702718,+ | ||
|ontology_enrichment_celltype=CL:0000359!1.02e-40!32;CL:0000192!1.26e-29!42;CL:0000514!1.26e-29!42;CL:0000680!8.36e-27!57;CL:0000056!8.36e-27!57;CL:0000355!8.36e-27!57;CL:0000187!6.12e-24!54;CL:0000183!2.10e-21!59;CL:0000393!5.99e-21!60;CL:0000211!5.99e-21!60;CL:0000222!2.16e-15!119;CL:0002539!4.82e-15!10;CL:0000055!1.06e-12!180;CL:0002595!9.46e-12!5;CL:0002494!1.23e-11!16;CL:0002592!1.11e-10!3;CL:0000048!2.06e-09!430;CL:0000153!3.92e-09!9;CL:0000447!3.92e-09!9;CL:0000723!4.10e-09!436;CL:0000034!9.93e-09!444;CL:0002593!3.76e-08!2;CL:0002589!6.02e-08!2;CL:0002594!6.47e-08!4;CL:0000569!6.62e-08!4;CL:0000011!6.62e-08!4;CL:0000220!8.12e-08!246;CL:0000327!8.42e-08!14;CL:0002321!1.09e-07!248;CL:0002596!1.29e-07!2 | |ontology_enrichment_celltype=CL:0000359!1.02e-40!32;CL:0000192!1.26e-29!42;CL:0000514!1.26e-29!42;CL:0000680!8.36e-27!57;CL:0000056!8.36e-27!57;CL:0000355!8.36e-27!57;CL:0000187!6.12e-24!54;CL:0000183!2.10e-21!59;CL:0000393!5.99e-21!60;CL:0000211!5.99e-21!60;CL:0000222!2.16e-15!119;CL:0002539!4.82e-15!10;CL:0000055!1.06e-12!180;CL:0002595!9.46e-12!5;CL:0002494!1.23e-11!16;CL:0002592!1.11e-10!3;CL:0000048!2.06e-09!430;CL:0000153!3.92e-09!9;CL:0000447!3.92e-09!9;CL:0000723!4.10e-09!436;CL:0000034!9.93e-09!444;CL:0002593!3.76e-08!2;CL:0002589!6.02e-08!2;CL:0002594!6.47e-08!4;CL:0000569!6.62e-08!4;CL:0000011!6.62e-08!4;CL:0000220!8.12e-08!246;CL:0000327!8.42e-08!14;CL:0002321!1.09e-07!248;CL:0002596!1.29e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.36e-39;32!CL:0002595;9.60e-32;5!CL:0000192;2.42e-21;43!CL:0002593;1.32e-20;2!CL:0002589;4.24e-20;2!CL:0002592;1.41e-13;3!CL:0000187;6.66e-11;55!CL:0000511;1.15e-10;1!CL:0002625;1.15e-10;1!CL:0000216;1.15e-10;1!CL:0000153;4.38e-10;9!CL:0000447;4.38e-10;9!CL:0000393;5.26e-08;61!CL:0000211;5.26e-08;61!CL:0000138;3.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.35e-41,32;CL:0002595,9.62e-32,5;CL:0000192,4.64e-30,43;CL:0000514,4.64e-30,43;CL:0000187,4.16e-23,55;CL:0000680,8.10e-22,58;CL:0000056,8.10e-22,58;CL:0000355,8.10e-22,58;CL:0000393,1.18e-20,61;CL:0000211,1.18e-20,61;CL:0002593,1.39e-20,2;CL:0002589,5.40e-20,2;CL:0002592,1.32e-13,3;CL:0000222,3.26e-13,121;CL:0000511,8.22e-11,1;CL:0002625,8.22e-11,1;CL:0000216,8.22e-11,1;CL:0000153,4.19e-10,9;CL:0000447,4.19e-10,9;CL:0000058,2.96e-07,6;CL:0000138,2.96e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;2.42e-21;43!CL:0000355;9.56e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!2.04e-10!14 | |ontology_enrichment_disease=DOID:2394!2.04e-10!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p7@CXCL6 | |short_description=p7@CXCL6 | ||
}} | }} |
Latest revision as of 14:42, 18 September 2015
Short description: | p7@CXCL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CXCL6_5end |
Coexpression cluster: | C1524_Smooth_mesenchymal_Chondrocyte_Aortic_Synoviocyte_Preadipocyte_tenocyte |
Association with transcript: | -185bp_to_ENST00000503446_5end |
EntrezGene: | CXCL6 |
HGNC: | 10643 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.35e-41 | 32 |
smooth muscle cell of the subclavian artery | 9.62e-32 | 5 |
smooth muscle cell | 4.64e-30 | 43 |
smooth muscle myoblast | 4.64e-30 | 43 |
muscle cell | 4.16e-23 | 55 |
muscle precursor cell | 8.10e-22 | 58 |
myoblast | 8.10e-22 | 58 |
multi-potent skeletal muscle stem cell | 8.10e-22 | 58 |
electrically responsive cell | 1.18e-20 | 61 |
electrically active cell | 1.18e-20 | 61 |
smooth muscle cell of the internal thoracic artery | 1.39e-20 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 5.40e-20 | 2 |
smooth muscle cell of the coronary artery | 1.32e-13 | 3 |
mesodermal cell | 3.26e-13 | 121 |
androgen binding protein secreting cell | 8.22e-11 | 1 |
seminiferous tubule epithelial cell | 8.22e-11 | 1 |
Sertoli cell | 8.22e-11 | 1 |
GAG secreting cell | 4.19e-10 | 9 |
carbohydrate secreting cell | 4.19e-10 | 9 |
chondroblast | 2.96e-07 | 6 |
chondrocyte | 2.96e-07 | 6 |