FFCP PHASE1:Hg19::chr17:9808496..9808505,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5957 | |EntrezGene=5957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9937 | |HGNC=9937 | ||
|TSSclassifier=strong | |||
|UniProt=P35243,Q53XL0 | |UniProt=P35243,Q53XL0 | ||
|association_with_transcript=178bp_to_ENST00000226193,NM_002903,uc002gme.1_5end | |||
|cluster_id=chr17:9808496..9808505,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_2_at_RCVRN_5end | |||
|id=chr17:9808496..9808505,- | |||
|ontology_enrichment_celltype=CL:0000064!1.40e-08!3;CL:0005012!1.40e-08!3;CL:0000067!1.40e-08!3;CL:0002304!1.40e-08!3;CL:0000306!8.61e-07!4;CL:0002222!8.61e-07!4;CL:0002224!8.61e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.17e-17;2!CL:0000306;1.63e-09;4!CL:0002222;1.63e-09;4!CL:0002224;1.63e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.70e-09,4;CL:0002222,1.70e-09,4;CL:0002224,1.70e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.07e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!5.00e-45!2;UBERON:0002757!5.00e-45!2;UBERON:0010134!5.00e-45!2;UBERON:0002784!5.00e-45!2;UBERON:0005408!5.00e-45!2;UBERON:0001899!5.00e-45!2;UBERON:0003296!4.11e-23!4;UBERON:0010133!4.11e-23!4;UBERON:0002902!6.40e-23!1;UBERON:0009899!6.40e-23!1;UBERON:0000970!4.45e-18!20;UBERON:0002104!3.06e-17!21;UBERON:0000020!8.78e-16!23;UBERON:0001032!3.82e-15!24;UBERON:0004456!3.82e-15!24;UBERON:0001894!1.15e-13!7;UBERON:0006222!1.15e-13!7;UBERON:0003056!8.63e-13!61;UBERON:0002360!2.90e-12!2;UBERON:0000094!2.90e-12!2;UBERON:0007645!2.90e-12!2;UBERON:0003075!2.90e-12!86;UBERON:0007284!2.90e-12!86;UBERON:0002346!1.02e-11!90;UBERON:0000019!4.22e-11!19;UBERON:0000047!4.22e-11!19;UBERON:0004088!4.22e-11!19;UBERON:0003072!4.22e-11!19;UBERON:0003071!4.22e-11!19;UBERON:0004128!4.22e-11!19;UBERON:0001456!4.17e-10!21;UBERON:0005743!5.11e-09!86;UBERON:0007625!6.35e-09!11;UBERON:0001778!1.40e-08!3;UBERON:0001775!1.40e-08!3;UBERON:0000073!3.56e-08!94;UBERON:0001016!3.56e-08!94;UBERON:0004121!5.90e-08!169;UBERON:0000924!9.11e-08!173;UBERON:0006601!9.11e-08!173;UBERON:0005085!1.74e-07!29;UBERON:0001801!3.34e-07!14;UBERON:0010077!8.61e-07!4;UBERON:0005389!8.61e-07!4;UBERON:0000484!8.61e-07!4;UBERON:0002546!8.61e-07!4;UBERON:0000965!8.61e-07!4;UBERON:0001803!8.61e-07!4;UBERON:0003073!8.61e-07!4;UBERON:0005426!8.61e-07!4;UBERON:0000488!9.63e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.84e-66;2!UBERON:0002757;2.84e-66;2!UBERON:0010134;2.84e-66;2!UBERON:0005408;2.84e-66;2!UBERON:0001899;2.84e-66;2!UBERON:0003296;8.36e-34;4!UBERON:0010133;8.36e-34;4!UBERON:0002784;8.36e-34;4!UBERON:0001894;7.84e-20;7!UBERON:0000970;1.20e-15;20!UBERON:0002104;6.08e-15;21!UBERON:0000020;1.03e-13;23!UBERON:0001032;3.55e-13;24!UBERON:0004456;3.55e-13;24!UBERON:0010077;1.63e-09;4!UBERON:0005389;1.63e-09;4!UBERON:0000484;1.63e-09;4!UBERON:0000965;1.63e-09;4!UBERON:0001803;1.63e-09;4!UBERON:0000966;5.73e-08;5!UBERON:0005388;5.73e-08;5!UBERON:0001802;5.73e-08;5!UBERON:0000019;6.04e-08;19!UBERON:0000047;6.04e-08;19!UBERON:0004088;6.04e-08;19!UBERON:0010230;6.04e-08;19!UBERON:0001456;2.82e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.84e-66,2;UBERON:0002757,2.84e-66,2;UBERON:0010134,2.84e-66,2;UBERON:0005408,2.84e-66,2;UBERON:0001899,2.84e-66,2;UBERON:0003296,8.36e-34,4;UBERON:0010133,8.36e-34,4;UBERON:0002784,8.36e-34,4;UBERON:0001894,7.84e-20,7;UBERON:0006222,7.84e-20,7;UBERON:0000970,6.23e-15,21;UBERON:0002104,6.23e-15,21;UBERON:0000020,3.63e-13,24;UBERON:0001032,3.63e-13,24;UBERON:0004456,3.63e-13,24;UBERON:0010077,1.70e-09,4;UBERON:0005389,1.70e-09,4;UBERON:0000484,1.70e-09,4;UBERON:0002546,1.70e-09,4;UBERON:0000965,1.70e-09,4;UBERON:0001803,1.70e-09,4;UBERON:0003073,1.70e-09,4;UBERON:0005426,1.70e-09,4;UBERON:0003056,4.43e-09,61;UBERON:0000019,1.38e-07,20;UBERON:0000047,1.38e-07,20;UBERON:0010312,1.38e-07,20;UBERON:0004088,1.38e-07,20;UBERON:0010230,1.38e-07,20;UBERON:0003072,1.38e-07,20;UBERON:0004128,1.38e-07,20;UBERON:0003071,1.38e-07,20;UBERON:0001456,5.57e-07,22;UBERON:0003075,6.64e-07,82;UBERON:0007284,6.64e-07,82;UBERON:0000966,7.58e-07,6;UBERON:0005388,7.58e-07,6;UBERON:0001802,7.58e-07,6 | |||
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|short_description=p2@RCVRN | |||
}} | }} |
Latest revision as of 17:19, 18 September 2015
Short description: | p2@RCVRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RCVRN_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 178bp_to_ENST00000226193, NM_002903, uc002gme.1_5end |
EntrezGene: | RCVRN |
HGNC: | 9937 |
UniProt: | P35243Q53XL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.70e-09 | 4 |
vertebrate lens cell | 1.70e-09 | 4 |
lens epithelial cell | 1.70e-09 | 4 |