FFCP PHASE1:Hg19::chr18:11851090..11851103,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57132 | |EntrezGene=57132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24287 | |HGNC=24287 | ||
|TSSclassifier=strong | |||
|UniProt=Q7LBR1 | |UniProt=Q7LBR1 | ||
|association_with_transcript=-285bp_to_NM_020412,uc002kqe.2_5end | |association_with_transcript=-285bp_to_NM_020412,uc002kqe.2_5end | ||
|cluster_id=chr18:11851090..11851103,+ | |||
|coexpression_cluster_id=C213 | |||
|description=CAGE_peak_5_at_CHMP1B_5end | |description=CAGE_peak_5_at_CHMP1B_5end | ||
|id=chr18:11851090..11851103,+ | |id=chr18:11851090..11851103,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.31e-44!42;CL:0000860!4.27e-40!45;CL:0000557!3.00e-28!71;CL:0000738!7.87e-28!140;CL:0002009!3.77e-27!65;CL:0000766!6.51e-27!76;CL:0000839!1.57e-25!70;CL:0002194!5.24e-25!63;CL:0000576!5.24e-25!63;CL:0000040!5.24e-25!63;CL:0000559!5.24e-25!63;CL:0002031!1.30e-24!124;CL:0002087!1.26e-23!119;CL:0000037!7.51e-21!172;CL:0000566!7.51e-21!172;CL:0000988!3.38e-19!182;CL:0002032!4.17e-19!165;CL:0000837!4.17e-19!165;CL:0000763!9.46e-18!112;CL:0000049!9.46e-18!112;CL:0000134!3.03e-17!358;CL:0002320!7.50e-17!365;CL:0000219!2.03e-13!390;CL:0000034!5.89e-11!444;CL:0000048!8.90e-11!430;CL:0000723!3.28e-10!436;CL:0000624!1.50e-08!6;CL:0002393!3.35e-08!9;CL:0002397!3.35e-08!9 | |ontology_enrichment_celltype=CL:0002057!4.31e-44!42;CL:0000860!4.27e-40!45;CL:0000557!3.00e-28!71;CL:0000738!7.87e-28!140;CL:0002009!3.77e-27!65;CL:0000766!6.51e-27!76;CL:0000839!1.57e-25!70;CL:0002194!5.24e-25!63;CL:0000576!5.24e-25!63;CL:0000040!5.24e-25!63;CL:0000559!5.24e-25!63;CL:0002031!1.30e-24!124;CL:0002087!1.26e-23!119;CL:0000037!7.51e-21!172;CL:0000566!7.51e-21!172;CL:0000988!3.38e-19!182;CL:0002032!4.17e-19!165;CL:0000837!4.17e-19!165;CL:0000763!9.46e-18!112;CL:0000049!9.46e-18!112;CL:0000134!3.03e-17!358;CL:0002320!7.50e-17!365;CL:0000219!2.03e-13!390;CL:0000034!5.89e-11!444;CL:0000048!8.90e-11!430;CL:0000723!3.28e-10!436;CL:0000624!1.50e-08!6;CL:0002393!3.35e-08!9;CL:0002397!3.35e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.71e-47;33!CL:0002057;2.71e-47;33!CL:0000473;1.38e-32;39!CL:0000234;1.38e-32;39!CL:0000576;2.11e-28;48!CL:0000766;1.13e-22;69!CL:0002087;6.23e-15;104!CL:0000738;5.27e-12;136!CL:0000623;6.85e-12;3!CL:0000767;1.71e-11;3!CL:0000624;1.34e-09;6!CL:0000763;1.77e-09;100!CL:0002393;2.65e-09;6!CL:0002397;2.65e-09;6!CL:0000791;7.31e-09;18!CL:0000789;7.31e-09;18!CL:0002419;7.31e-09;18!CL:0001014;3.15e-08;2!CL:0001016;3.15e-08;2!CL:0000988;9.58e-08;177!CL:0000219;8.22e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.20e-55,42;CL:0002057,7.20e-55,42;CL:0000738,1.31e-51,136;CL:0002031,3.23e-49,120;CL:0000473,4.47e-47,48;CL:0000234,4.47e-47,48;CL:0000557,4.65e-45,67;CL:0000766,2.25e-44,72;CL:0002087,6.32e-42,115;CL:0002009,8.67e-41,61;CL:0002032,7.51e-40,161;CL:0000837,7.51e-40,161;CL:0000839,1.15e-39,66;CL:0000037,1.21e-39,168;CL:0000988,4.70e-37,177;CL:0002194,3.56e-36,59;CL:0000576,3.56e-36,59;CL:0000040,3.56e-36,59;CL:0000559,3.56e-36,59;CL:0000763,7.04e-31,108;CL:0000049,7.04e-31,108;CL:0000134,3.60e-18,354;CL:0002320,1.39e-17,361;CL:0000219,1.65e-15,386;CL:0000034,8.31e-14,441;CL:0000048,5.67e-13,427;CL:0000723,1.27e-12,433;CL:0000623,7.10e-12,3;CL:0000825,7.10e-12,3;CL:0000767,1.65e-11,3;CL:0000624,1.34e-09,6;CL:0000791,7.26e-09,18;CL:0000789,7.26e-09,18;CL:0002420,7.26e-09,18;CL:0002419,7.26e-09,18;CL:0000790,7.26e-09,18;CL:0000838,9.55e-09,52;CL:0000542,1.59e-08,53;CL:0000051,1.59e-08,53;CL:0001014,3.20e-08,2;CL:0001016,3.20e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;4.87e-40;42!CL:0000790;7.31e-09;18!CL:0000049;3.20e-08;108 | |||
|ontology_enrichment_disease=DOID:2394!5.02e-08!14 | |ontology_enrichment_disease=DOID:2394!5.02e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.05e-27!80;UBERON:0001474!4.82e-24!86;UBERON:0002390!4.66e-23!102;UBERON:0003061!4.66e-23!102;UBERON:0004765!7.96e-20!101;UBERON:0001434!7.96e-20!101;UBERON:0002193!2.09e-19!112;UBERON:0002384!1.10e-16!375;UBERON:0002405!1.17e-15!115;UBERON:0003081!1.58e-07!216;UBERON:0002204!1.76e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.71e-39,76;UBERON:0001474,2.31e-35,82;UBERON:0002390,2.02e-32,98;UBERON:0003061,2.02e-32,98;UBERON:0002405,2.36e-32,93;UBERON:0004765,1.67e-31,90;UBERON:0002193,1.26e-28,108;UBERON:0001434,1.53e-27,100;UBERON:0002384,8.86e-17,371;UBERON:0002204,2.85e-13,167;UBERON:0003081,4.00e-13,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.194292582316,6.52509976765262,10.6823125088092,0,0,0,0,0,0.587200878669695,3.87796785972314,8.82395568868623,13.0206522429511,0,0,0,1.16318591023652,0.377875943688809,1.94067248950253,2.78914844286822,2.87817521615278,4.02618282163635,0.863077176966451,2.0492856522328,4.25668013799453,6.20542225325913,8.39130088658974,16.251178391321,1.88242339542605,0.818718450173537,2.47195832889593,2.14258724659632,4.17207735198922,11.5080682643827,0.659702600373432,1.79517291859469,0.426224750532694,2.03146467040009,1.70215567407342,5.60540024096017,3.51748131359441,5.73631210262222,4.99534342821768,0.605399502633369,2.20966581592539,6.96217252369946,0.211255286311942,1.4882300997553,0.838634582033504,0.112328631146495,0.450530678524519,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,11.9534723512984,9.98303221930596,6.11637165000366,1.32171328579026,6.1655941927969,0.526768169550154,7.27826149421182,18.0784950864616,7.81285696198135,0,0.651844533267181,1.4203434172042,1.94826728407911,0.111410456885174,0.883817722424512,0.221533894583621,0.270803863765016,0,0.260118695119756,0,0,0,0.593146252648242,0.802622484269139,0,0,2.29932296161153,1.03088233644789,0.759059076058509,0,0,0,0,0,0,0,0,15.9269327147539,22.9998568373816,13.1790207533347,0,0,0,0,0,0.869079113764942,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0.515281080091258,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76854665743776,1.8735593944205,4.79721247020244,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.45747648969251,25.2284262585635,20.0215136596407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96142661882819,0.640365346820666,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0.383010740264733,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,0.296964680832639,1.22864280839693,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0.638002319463839,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,5.39937339723601,20.8926527730646,0.121499113316049,0,0.0788057072991982,0,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0.7520696820681,0.919036730290385,0.983617892129413,0,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0,0.298509605773748,0.233713309847224,0,0.378806010550178,0.50313580350515,0,0.915360273587694,0.907385542579434,0.15543720058278,0,0.318593534327405,0,0.155262956876259,0.414706207840855,0,0.521745061811734,0.751288044986092,0.380805212168795,0.406870733204662,1.45478927362048,0.751873899297419,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0.22910686854405,3.72247662797184,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0,0,0.0636471582781649,0.808468755832877,0.217716747896961,0,0,0.0717222053926763,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.194292582316,6.52509976765262,10.6823125088092,0,0,0,0,0,0.587200878669695,3.87796785972314,8.82395568868623,13.0206522429511,0,0,0,1.16318591023652,0.377875943688809,1.94067248950253,2.78914844286822,2.87817521615278,4.02618282163635,0.863077176966451,2.0492856522328,4.25668013799453,6.20542225325913,8.39130088658974,16.251178391321,1.88242339542605,0.818718450173537,2.47195832889593,2.14258724659632,4.17207735198922,11.5080682643827,0.659702600373432,1.79517291859469,0.426224750532694,2.03146467040009,1.70215567407342,5.60540024096017,3.51748131359441,5.73631210262222,4.99534342821768,0.605399502633369,2.20966581592539,6.96217252369946,0.211255286311942,1.4882300997553,0.838634582033504,0.112328631146495,0.450530678524519,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,11.9534723512984,9.98303221930596,6.11637165000366,1.32171328579026,6.1655941927969,0.526768169550154,7.27826149421182,18.0784950864616,7.81285696198135,0,0.651844533267181,1.4203434172042,1.94826728407911,0.111410456885174,0.883817722424512,0.221533894583621,0.270803863765016,0,0.260118695119756,0,0,0,0.593146252648242,0.802622484269139,0,0,2.29932296161153,1.03088233644789,0.759059076058509,0,0,0,0,0,0,0,0,15.9269327147539,22.9998568373816,13.1790207533347,0,0,0,0,0,0.869079113764942,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0.515281080091258,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76854665743776,1.8735593944205,4.79721247020244,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.45747648969251,25.2284262585635,20.0215136596407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96142661882819,0.640365346820666,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0.383010740264733,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,0.296964680832639,1.22864280839693,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0.638002319463839,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,5.39937339723601,20.8926527730646,0.121499113316049,0,0.0788057072991982,0,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0.7520696820681,0.919036730290385,0.983617892129413,0,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0,0.298509605773748,0.233713309847224,0,0.378806010550178,0.50313580350515,0,0.915360273587694,0.907385542579434,0.15543720058278,0,0.318593534327405,0,0.155262956876259,0.414706207840855,0,0.521745061811734,0.751288044986092,0.380805212168795,0.406870733204662,1.45478927362048,0.751873899297419,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0.22910686854405,3.72247662797184,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0,0,0.0636471582781649,0.808468755832877,0.217716747896961,0,0,0.0717222053926763,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p5@CHMP1B | |short_description=p5@CHMP1B | ||
}} | }} |
Latest revision as of 19:03, 18 September 2015
Short description: | p5@CHMP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CHMP1B_5end |
Coexpression cluster: | C213_CD14_Natural_CD8_CD4_Basophils_Eosinophils_Peripheral |
Association with transcript: | -285bp_to_NM_020412, uc002kqe.2_5end |
EntrezGene: | CHMP1B |
HGNC: | 24287 |
UniProt: | Q7LBR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.71e-39 | 76 |
bone element | 2.31e-35 | 82 |
hematopoietic system | 2.02e-32 | 98 |
blood island | 2.02e-32 | 98 |
immune system | 2.36e-32 | 93 |
skeletal element | 1.67e-31 | 90 |
hemolymphoid system | 1.26e-28 | 108 |
skeletal system | 1.53e-27 | 100 |
connective tissue | 8.86e-17 | 371 |
musculoskeletal system | 2.85e-13 | 167 |
lateral plate mesoderm | 4.00e-13 | 203 |